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Author Details

Hongkui Zeng
Allen Institute for Brain Science
1994
163
67
PMIDPaper TitleJournal TitlePublished Year
36774552Regional and cell-type-specific afferent and efferent projections of the mouse claustrum.Cell Rep2023
38045330epDevAtlas: Mapping GABAergic cells and microglia in postnatal mouse brains.bioRxiv2023
37824669Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex.Science2023
38092916A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.Nature2023
38092917Single-cell analysis of chromatin accessibility in the adult mouse brain.Nature2023
38092919Brain-wide correspondence of neuronal epigenomics and distant projections.Nature2023
38092914A transcriptomic taxonomy of mouse brain-wide spinal projecting neurons.Nature2023
38092913Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain.Nature2023
38092912Molecularly defined and spatially resolved cell atlas of the whole mouse brain.Nature2023
37790503Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species.bioRxiv2023
37612141Neuroscience Needs Network Science.J Neurosci2023
37214134Neuroscience needs Network Science.ArXiv2023
36774552Regional and cell-type-specific afferent and efferent projections of the mouse claustrum.Cell Rep2023
37131654Single-cell DNA Methylome and 3D Multi-omic Atlas of the Adult Mouse Brain.bioRxiv2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
36945367A molecularly defined and spatially resolved cell atlas of the whole mouse brain.bioRxiv2023
36550293A whole-brain monosynaptic input connectome to neuron classes in mouse visual cortex.Nat Neurosci2023
36993629Integrating EM and Patch-seq data: Synaptic connectivity and target specificity of predicted Sst transcriptomic types.bioRxiv2023
37492103Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes.Cell Genom2023
37546984Full-Spectrum Neuronal Diversity and Stereotypy through Whole Brain Morphometry.Res Sq2023
37542722All-optical recreation of naturalistic neural activity with a multifunctional transgenic reporter mouse.Cell Rep2023
37034802A Universal Method for Crossing Molecular and Atlas Modalities using Simplex-Based Image Varifolds and Quadratic Programming.bioRxiv2023
37034735A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.bioRxiv2023
37492103Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes.Cell Genom2023
37790503Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species.bioRxiv2023
37546984Full-Spectrum Neuronal Diversity and Stereotypy through Whole Brain Morphometry.Res Sq2023
37612141Neuroscience Needs Network Science.J Neurosci2023
37542722All-optical recreation of naturalistic neural activity with a multifunctional transgenic reporter mouse.Cell Rep2023
37824669Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex.Science2023
38045330epDevAtlas: Mapping GABAergic cells and microglia in postnatal mouse brains.bioRxiv2023
38092916A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.Nature2023
38092917Single-cell analysis of chromatin accessibility in the adult mouse brain.Nature2023
38092919Brain-wide correspondence of neuronal epigenomics and distant projections.Nature2023
38092914A transcriptomic taxonomy of mouse brain-wide spinal projecting neurons.Nature2023
38092913Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain.Nature2023
38092912Molecularly defined and spatially resolved cell atlas of the whole mouse brain.Nature2023
36993629Integrating EM and Patch-seq data: Synaptic connectivity and target specificity of predicted Sst transcriptomic types.bioRxiv2023
37390046A guide to the BRAIN Initiative Cell Census Network data ecosystem.PLoS Biol2023
37214134Neuroscience needs Network Science.ArXiv2023
36945367A molecularly defined and spatially resolved cell atlas of the whole mouse brain.bioRxiv2023
37034802A Universal Method for Crossing Molecular and Atlas Modalities using Simplex-Based Image Varifolds and Quadratic Programming.bioRxiv2023
37034735A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain.bioRxiv2023
37131654Single-cell DNA Methylome and 3D Multi-omic Atlas of the Adult Mouse Brain.bioRxiv2023
36550293A whole-brain monosynaptic input connectome to neuron classes in mouse visual cortex.Nat Neurosci2023
34990233Dense functional and molecular readout of a circuit hub in sensory cortex.Science2022
36170850Cardiovascular baroreflex circuit moonlights in sleep control.Neuron2022
36347848Spatially resolved gene regulatory and disease-related vulnerability map of the adult Macaque cortex.Nat Commun2022
35377797Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.Proc Natl Acad Sci U S A2022
35794379A gene-expression axis defines neuron behaviour.Nature2022
35793636Intersectional mapping of multi-transmitter neurons and other cell types in the brain.Cell Rep2022
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Collaborators

Zizhen Yao
Allen Institute for Brain Science
Co-authored papers 37
Michael Hawrylycz
Allen Institute for Brain Science
Co-authored papers 34
Ed S Lein
Allen Institute for Brain Science
Co-authored papers 29
Amy Bernard
The Kavli Foundation
Co-authored papers 23
Lydia Ng
Allen Institute for Brain Science
Co-authored papers 22
Jeff Goldy
Co-authored papers 17
Trygve E Bakken
Allen Institute for Brain Science
Co-authored papers 13
Hanchuan Peng
Institute for Brain and Intelligence, Southeast University
Co-authored papers 12
Nathan W Gouwens
Allen Institute for Brain Science
Co-authored papers 12
Joseph R Ecker
The Salk Institute for Biological Studies
Co-authored papers 10
Jeremy A Miller
Co-authored papers 10
Christof Koch
Co-authored papers 10
Cindy T J van Velthoven
Allen Institute for Brain Science
Co-authored papers 10
John G Hohmann
Co-authored papers 8
Bing Ren
Center for Epigenomics, University of California San Diego
Co-authored papers 8
Christopher Dirk Keene
University of Washington
Co-authored papers 8
Song-Lin Ding
Allen Institute for Brain Science
Co-authored papers 8
Carol L Thompson
Allen Institute for Brain Science
Co-authored papers 8
Jeffrey G Ojemann
University of Washington
Co-authored papers 7
Patrick R Hof
Icahn School of Medicine at Mount Sinai
Co-authored papers 7
Joseph R Nery
The Salk Institute for Biological Studies
Co-authored papers 7
Richard H Scheuermann
J. Craig Venter Institute
Co-authored papers 7
Quanxin Wang
School of Pharmaceutical Sciences, Peking University
Co-authored papers 6
Keith Baker
Allen Institute for Brain Science
Co-authored papers 6
Eran A Mukamel
University of California San Diego
Co-authored papers 6
Tae Kyung Kim
Co-authored papers 6
Boudewijn P F Lelieveldt
Leiden University Medical Center
Co-authored papers 6
Michael Rosbash
Co-authored papers 5
Edward S Boyden
McGovern Institute for Brain Research
Co-authored papers 5
Tim Dolbeare
Allen Institute for Brain Science
Co-authored papers 5
Release 1.2