Author details

Full Name

Natali Kolker

Affiliation

ORCID

Career Start Year

2001

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
28248256	Integrated Proteomic and Transcriptomic-Based Approaches to Identifying Signature Biomarkers and Pathways for Elucidation of Daoy and UW228 Subtypes.	Proteomes	2017
27441585	A Case Study: Analyzing City Vitality with Four Pillars of Activity-Live, Work, Shop, and Play.	Big Data	2016
26575978	Finding Text-Supported Gene-to-Disease Co-appearances with MOPED-Digger.	OMICS	2015
25831060	The promise of multi-omics and clinical data integration to identify and target personalized healthcare approaches in autism spectrum disorders.	OMICS	2015
25404128	Beyond protein expression, MOPED goes multi-omics.	Nucleic Acids Res	2015
25530493	Comparison of proteomic and metabolomic profiles of mutants of the mitochondrial respiratory chain in Caenorhabditis elegans.	Mitochondrion	2015
24910945	MOPED 2.5--an integrated multi-omics resource: multi-omics profiling expression database now includes transcriptomics data.	OMICS	2014
25313296	Optimizing high performance computing workflow for protein functional annotation.	Concurrency Computation Practice and Experience	2014
24456465	Toward more transparent and reproducible omics studies through a common metadata checklist and data publications.	OMICS	2014
24350770	MOPED enables discoveries through consistently processed proteomics data.	J Proteome Res	2014
27447037	Unraveling the Complexities of Life Sciences Data.	Big Data	2013
27447256	Predictive Analytics In Healthcare: Medications as a Predictor of Medical Complexity.	Big Data	2013
27447251	Toward More Transparent and Reproducible Omics Studies Through a Common Metadata Checklist and Data Publications.	Big Data	2013
22139914	MOPED: Model Organism Protein Expression Database.	Nucleic Acids Research	2012
21609792	SPIRE: Systematic protein investigative research environment.	J Proteomics	2011
21476841	Technology and data-intensive science in the beginning of the 21st century.	OMICS	2011
21250827	Design and initial characterization of the SC-200 proteomics standard mixture.	OMICS	2011
21809957	Classifying proteins into functional groups based on all-versus-all BLAST of 10 million proteins.	OMICS A Journal of Integrative Biology	2011
21718813	IPM: An integrated protein model for false discovery rate estimation and identification in high-throughput proteomics.	J Proteomics	2011
20808949	The United States of America and scientific research.	PLoS One	2010
18092908	Experiment-specific estimation of peptide identification probabilities using a randomized database.	OMICS A Journal of Integrative Biology	2007
17890649	Development of BIATECH-54 standard mixtures for assessment of protein identification and relative expression.	Proteomics	2007
16779323	Integration of data for gene annotation using the BioMediator system.	AMIA Annu Symp Proc	2005
15684069	Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations.	Proc Natl Acad Sci U S A	2005
16209638	Charge state estimation for tandem mass spectrometry proteomics.	OMICS A Journal of Integrative Biology	2005
15669717	Spectral quality assessment for high-throughput tandem mass spectrometry proteomics.	OMICS	2004
15703482	LIP index for peptide classification using MS/MS and SEQUEST search via logistic regression.	OMICS A Journal of Integrative Biology	2004
11462842	Sequence-based detection of single nucleotide polymorphisms.	Methods Mol Biol	2001