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Author Details

Marcin Imielinski
2002
75
42
PMIDPaper TitleJournal TitlePublished Year
37652664The importance of escalating molecular diagnostics in patients with low-grade pediatric brain cancer.Cold Spring Harb Mol Case Stud2024
36723991Molecular Evolution of Classic Hodgkin Lymphoma Revealed Through Whole-Genome Sequencing of Hodgkin and Reed Sternberg Cells.Blood Cancer Discov2023
37945902Most large structural variants in cancer genomes can be detected without long reads.Nat Genet2023
37587346Long-molecule scars of backup DNA repair in BRCA1- and BRCA2-deficient cancers.Nature2023
37217613Faster detection of somatic structural variants.2023
36697832Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.Nature2023
35233546System-wide transcriptome damage and tissue identity loss in COVID-19 patients.Cell Rep Med2022
35443279SETD2 Haploinsufficiency Enhances Germinal Center-Associated AICDA Somatic Hypermutation to Drive B-cell Lymphomagenesis.Cancer Discov2022
35637420Identifying synergistic high-order 3D chromatin conformations from genome-scale nanopore concatemer sequencing.Nat Biotechnol2022
35803911Recurrent somatic mutations as predictors of immunotherapy response.Nature Communications2022
35484108Somatic whole genome dynamics of precancer in Barrett's esophagus reveals features associated with disease progression.Nat Commun2022
35418694Correction to: Oncogenic RIT1 mutations in lung adenocarcinoma.Oncogene2022
35931739Publisher Correction: Recurrent somatic mutations as predictors of immunotherapy response.Nature Communications2022
36450981Genomic signature of Fanconi anaemia DNA repair pathway deficiency in cancer.Nature2022
36577525Whole-genome characterization of myoepithelial carcinomas of the soft tissue.Cold Spring Harb Mol Case Stud2022
33355651A Genomic-Pathologic Annotated Risk Model to Predict Recurrence in Early-Stage Lung Adenocarcinoma.JAMA Surg2021
33972312Discovery of Candidate DNA Methylation Cancer Driver Genes.Cancer Discov2021
33626341Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway.Cell Rep2021
33876771Integrated mutational landscape analysis of uterine leiomyosarcomas.Proc Natl Acad Sci U S A2021
33828097Structural variant evolution after telomere crisis.Nature Communications2021
33722351Editorial overview: The most difficult of years in cancer research.Curr Opin Genet Dev2021
33758858Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps.bioRxiv2021
33712587Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.Nat Commun2021
33217316Impact of Lineage Plasticity to and from a Neuroendocrine Phenotype on Progression and Response in Prostate and Lung Cancers.Mol Cell2020
32511352Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.bioRxiv2020
33007263Distinct Classes of Complex Structural Variation Uncovered across Thousands of Cancer Genome Graphs.Cell2020
31068700Next-generation characterization of the Cancer Cell Line Encyclopedia.Nature2019
29292031Deep Convolutional Neural Networks Enable Discrimination of Heterogeneous Digital Pathology Images.EBioMedicine2018
30166475Fusion oncogenes-genetic musical chairs.Science2018
29535149SvABA: genome-wide detection of structural variants and indels by local assembly.Genome Res2018
29342134Chromosomal instability drives metastasis through a cytosolic DNA response.Nature2018
28089356Insertions and Deletions Target Lineage-Defining Genes in Human Cancers.Cell2017
28374788Prostate cancer: Clinical hallmarks in whole cancer genomes.Nat Rev Clin Oncol2017
29177203Modeling cancer rearrangement landscapes.Current Opinion in Systems Biology2017
29232558High-throughput Phenotyping of Lung Cancer Somatic Mutations.Cancer Cell2017
27789569The cancer precision medicine knowledge base for structured clinical-grade mutations and interpretations.J Am Med Inform Assoc2017
26656844Identification of focally amplified lineage-specific super-enhancers in human epithelial cancers.Nat Genet2016
27478040High-throughput Phenotyping of Lung Cancer Somatic Mutations.Cancer Cell2016
27158780Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas.Nat Genet2016
24569458Oncogenic and sorafenib-sensitive ARAF mutations in lung adenocarcinoma.J Clin Invest2014
25512530Genetic modifiers of EGFR dependence in non-small cell lung cancer.Proc Natl Acad Sci U S A2014
24498085A pan-cancer analysis of transcriptome changes associated with somatic mutations in U2AF1 reveals commonly altered splicing events.PLoS One2014
24469055Oncogenic RIT1 mutations in lung adenocarcinoma.Oncogene2014
23770567Mutational heterogeneity in cancer and the search for new cancer-associated genes.Nature2013
22240506Integrated proteomic, transcriptomic, and biological network analysis of breast carcinoma reveals molecular features of tumorigenesis and clinical relapse.Molecular and Cellular Proteomics2012
22908275Functional analysis of receptor tyrosine kinase mutations in lung cancer identifies oncogenic extracellular domain mutations of ERBB2.Proc Natl Acad Sci U S A2012
22817889A landscape of driver mutations in melanoma.Cell2012
22980975Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing.Cell2012
22138692Genome-wide copy number variation study associates metabotropic glutamate receptor gene networks with attention deficit hyperactivity disorder.Nat Genet2011
21297633Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47.Nat Genet2011
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The Center for Applied Genomics, Children's Hospital of Philadelphia
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Center for Spatial and Functional Genomics, The Children's Hospital of Philadelphia
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Broad Institute
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Broad Institute of the Massachusetts Institute of Technology and Harvard
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Meyer Cancer Center
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University of Pennsylvania
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Fred Hutchinson Cancer Research Center
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Center for Pediatric Clinical Effectiveness, Children's Hospital of Philadelphia
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The Broad Institute of MIT and Harvard
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Icahn School of Medicine at Mount Sinai
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Dana-Farber Cancer Institute
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New York NewYork-Presbyterian Hospital
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Caryl and Israel Englander Institute for Precision Medicine
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University of Bern
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Broad Institute of MIT and Harvard
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Institute for Computational Biomedicine
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Broad Institute of Harvard and MIT
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