Author details

Full Name

Wei Sun

Affiliation

ORCID

Career Start Year

2008

Papers

102

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
34921386	Estimating cell type composition using isoform expression one gene at a time.	Biometrics	2023
35833513	Prioritizing candidate peptides for cancer vaccines through predicting peptide presentation by HLA-I proteins.	Biometrics	2023
36217816	Associating somatic mutation with clinical outcomes through kernel regression and optimal transport.	Biometrics	2023
36436869	Water-borne, durable and multicolor silicon nanoparticles/sodium alginate inks for anticounterfeiting applications.	Carbohydrate Polymers	2023
36445035	Body mass index and molecular subtypes of colorectal cancer.	J Natl Cancer Inst	2023
36707929	Molecular Characteristics of Early-Onset Colorectal Cancer According to Detailed Anatomical Locations: Comparison With Later-Onset Cases.	Am J Gastroenterol	2023
36696954	New C-indices for assessing importance of longitudinal biomarkers in fitting competing risks survival data inÂ theÂ presence of partially masked causes.	Stat Med	2023
37231002	A computational method for cell type-specific expression quantitative trait loci mapping using bulk RNA-seq data.		2023
35286297	eQTL mapping using allele-specific count data is computationally feasible, powerful, and provides individual-specific estimates of genetic effects.	PLoS Genet	2022
35715570	Association between germline variants and somatic mutations in colorectal cancer.	Sci Rep	2022
35529781	Prioritizing Autism Risk Genes using Personalized Graphical Models Estimated from Single Cell RNA-seq Data.	Journal of the American Statistical Association	2022
35383926	Diabetes mellitus in relation to colorectal tumor molecular subtypes: A pooled analysis of more than 9000 cases.	Int J Cancer	2022
35484495	TCR-L: an analysis tool for evaluating the association between the T-cell receptor repertoire and clinical phenotypes.	BMC Bioinformatics	2022
35668106	Identifying colorectal cancer caused by biallelic MUTYH pathogenic variants using tumor mutational signatures.	Nat Commun	2022
34737207	Molecular and Pathology Features of Colorectal Tumors and Patient Outcomes Are Associated with <i>Fusobacterium nucleatum</i> and Its Subspecies <i>animalis</i>.	Cancer Epidemiol Biomarkers Prev	2022
35247911	Genetic Regulation of DNA Methylation Yields Novel Discoveries in GWAS of Colorectal Cancer.	Cancer Epidemiol Biomarkers Prev	2022
34996992	Genome-wide association study identifies tumor anatomical site-specific risk variants for colorectal cancer survival.	Sci Rep	2022
34813466	Unsupervised Intrinsic Image Decomposition Using Internal Self-Similarity Cues.		2022
35073995	IDEAS: individual level differential expression analysis for single-cell RNA-seq data.	Genome Biol	2022
31292609	Gaussian process regression for survival time prediction with genome-wide gene expression.	Biostatistics	2021
33707472	EMeth: An EM algorithm for cell type decomposition based on DNA methylation data.	Sci Rep	2021
34177376	Joint modelling of longitudinal and survival data in the presence of competing risks with applications to prostate cancer data.	Stat Modelling	2021
33203692	Genetic Predictors of Severe Skin Toxicity in Patients with Stage III Colon Cancer Treated with Cetuximab: NCCTG N0147 (Alliance).	Cancer Epidemiol Biomarkers Prev	2021
33040542	Coexistence of antineutrophil cytoplasmic antibody-associated vasculitis and membranous nephropathy: a case report.	Annals of palliative medicine	2021
34957416	Cell type-aware analysis of RNA-seq data.	Nature Computational Science	2021
34377935	Association Between Smoking and Molecular Subtypes of Colorectal Cancer.	JNCI Cancer Spectr	2021
34367406	MODEL FREE ESTIMATION OF GRAPHICAL MODEL USING GENE EXPRESSION DATA.	Annals of Applied Statistics	2021
35003378	A Statistical Method for Association Analysis of Cell Type Compositions.	Stat Biosci	2021
34413922	A COVARIANCE-ENHANCED APPROACH TO MULTI-TISSUE JOINT EQTL MAPPING WITH APPLICATION TO TRANSCRIPTOME-WIDE ASSOCIATION STUDIES.	Annals of Applied Statistics	2021
30596892	Estimation of high-dimensional directed acyclic graphs with surrogate intervention.	Biostatistics	2020
32396776	COMPARISON OF DIAGNOSTIC PERFORMANCE BETWEEN THE AMERICAN COLLEGE OF RADIOLOGY THYROID IMAGING REPORTING AND DATA SYSTEM AND AMERICAN THYROID ASSOCIATION GUIDELINES: A SYSTEMATIC REVIEW.	Endocrine Practice	2020
32226005	DNA methylation and cis-regulation of gene expression by prostate cancer risk SNPs.	PLoS Genet	2020
31813161	Joint analysis of single-cell and bulk tissue sequencing data to infer intratumor heterogeneity.	Biometrics	2020
31811950	Genetic Variant Associated With Survival of Patients With Stage II-III Colon Cancer.	Clin Gastroenterol Hepatol	2020
32655995	Integrative analysis of competitive endogenous RNA network reveals the regulatory role of non-coding RNAs in high-glucose-induced human retinal endothelial cells.	PeerJ	2020
32923935	Postmenopausal Hormone Therapy and Colorectal Cancer Risk by Molecularly Defined Subtypes and Tumor Location.	JNCI Cancer Spectr	2020
32816852	Intake of Dietary Fruit, Vegetables, and Fiber and Risk of Colorectal Cancer According to Molecular Subtypes: A Pooled Analysis of 9 Studies.	Cancer Res	2020
32686686	Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival.	Nat Commun	2020
30666629	A statistical method for joint estimation of cis-eQTLs and parent-of-origin effects under family trio design.	Biometrics	2019
30081434	Joint skeleton estimation of multiple directed acyclic graphs for heterogeneous population.	Biometrics	2019
31138328	Associating somatic mutations to clinical outcomes: a pan-cancer study of survival time.	Genome Medicine	2019
31427824	Statistical inference of genetic pathway analysis in high dimensions.	Biometrika	2019
29255115	Joint Analysis of Strain and Parent-of-Origin Effects for Recombinant Inbred Intercrosses Generated from Multiparent Populations with the Collaborative Cross as an Example.	G3: Genes, Genomes, Genetics	2018
28555076	Comparative genomic evidence for the involvement of schizophrenia risk genes in antipsychotic effects.	Mol Psychiatry	2018
30388102	Association analysis using somatic mutations.	PLoS Genetics	2018
30521517	Correction: Association analysis using somatic mutations.	PLoS Genetics	2018
29490610	A randomized approach to speed up the analysis of large-scale read-count data in the application of CNV detection.	BMC Bioinformatics	2018
29529299	The association between copy number aberration, DNA methylation and gene expression in tumor samples.	Nucleic Acids Res	2018
29306017	Statistical analysis of non-coding RNA data.	Cancer Letters	2018
28207250	DNA Product Formation in Female Sprague-Dawley Rats Following Polyhalogenated Aromatic Hydrocarbon (PHAH) Exposure.	Chemical Research in Toxicology	2017