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Author Details

John A Stamatoyannopoulos
Altius Institute for Biomedical Sciences
1992
157
84
Nathan Sheffield (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37986041Can polygenic risk scores help explain disease prevalence differences around the world? A worldwide investigation.BMC Genom Data2023
38014075An encyclopedia of enhancer-gene regulatory interactions in the human genome.bioRxiv2023
37986041Can polygenic risk scores help explain disease prevalence differences around the world? A worldwide investigation.BMC Genom Data2023
38014075An encyclopedia of enhancer-gene regulatory interactions in the human genome.bioRxiv2023
34400559Myasthenia gravis genome-wide association study implicates AGRN as a risk locus.J Med Genet2022
35412591Associations Between Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants and Risk of Coronavirus Disease 2019 (COVID-19) Hospitalization Among Confirmed Cases in Washington State: A Retrospective Cohort Study.Clin Infect Dis2022
35474001Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes.Nature2022
36191217The diverse genetic origins of a Classical period Greek army.Proc Natl Acad Sci U S A2022
36515579The missing link between genetic association and regulatory function.Elife2022
34400559Myasthenia gravis genome-wide association study implicates AGRN as a risk locus.J Med Genet2022
35150617Differences in nanoscale organization of regulatory active and inactive human chromatin.Biophys J2022
34996498Integrative analysis of 3604 GWAS reveals multiple novel cell type-specific regulatory associations.Genome Biol2022
35412591Associations Between Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants and Risk of Coronavirus Disease 2019 (COVID-19) Hospitalization Among Confirmed Cases in Washington State: A Retrospective Cohort Study.Clin Infect Dis2022
35474001Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes.Nature2022
36515579The missing link between genetic association and regulatory function.Elife2022
36191217The diverse genetic origins of a Classical period Greek army.Proc Natl Acad Sci U S A2022
35150617Differences in nanoscale organization of regulatory active and inactive human chromatin.Biophys J2022
34996498Integrative analysis of 3604 GWAS reveals multiple novel cell type-specific regulatory associations.Genome Biol2022
33990600Tissue context determines the penetrance of regulatory DNA variation.Nat Commun2021
33990600Tissue context determines the penetrance of regulatory DNA variation.Nat Commun2021
33770495Inaccessible LCG Promoters Act as Safeguards to Restrict T Cell Development to Appropriate Notch Signaling Environments.Stem Cell Reports2021
34815405Discrete regulatory modules instruct hematopoietic lineage commitment and differentiation.Nat Commun2021
33770495Inaccessible LCG Promoters Act as Safeguards to Restrict T Cell Development to Appropriate Notch Signaling Environments.Stem Cell Reports2021
34815405Discrete regulatory modules instruct hematopoietic lineage commitment and differentiation.Nat Commun2021
32241946De novo design of protein logic gates.Science2020
32241946De novo design of protein logic gates.Science2020
32101728Highly Parallel Quantification and Compartment Localization of Transcription Factors and Nuclear Proteins.Cell Rep2020
31757929Challenges and Approaches to Genotyping Repetitive DNA.G3 (Bethesda)2020
32579918Global Regulatory DNA Potentiation by SMARCA4 Propagates to Selective Gene Expression Programs via Domain-Level Remodeling.Cell Rep2020
32728249Expanded encyclopaedias of DNA elements in the human and mouse genomes.Nature2020
32728250Global reference mapping of human transcription factor footprints.Nature2020
32728217Index and biological spectrum of human DNase I hypersensitive sites.Nature2020
31757929Challenges and Approaches to Genotyping Repetitive DNA.G3 (Bethesda)2020
32101728Highly Parallel Quantification and Compartment Localization of Transcription Factors and Nuclear Proteins.Cell Rep2020
32579918Global Regulatory DNA Potentiation by SMARCA4 Propagates to Selective Gene Expression Programs via Domain-Level Remodeling.Cell Rep2020
32728249Expanded encyclopaedias of DNA elements in the human and mouse genomes.Nature2020
32728250Global reference mapping of human transcription factor footprints.Nature2020
32728217Index and biological spectrum of human DNase I hypersensitive sites.Nature2020
30605160Amendments: Author Correction: ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification.Nat Biotechnol2019
31798605Mapping and Dynamics of Regulatory DNA in Maturing <i>Arabidopsis thaliana</i> Siliques.Front Plant Sci2019
30605160Amendments: Author Correction: ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification.Nat Biotechnol2019
31161210eFORGE v2.0: updated analysis of cell type-specific signal in epigenomic data.Bioinformatics2019
31192450Genetic history of the population of Crete.Ann Hum Genet2019
31798605Mapping and Dynamics of Regulatory DNA in Maturing <i>Arabidopsis thaliana</i> Siliques.Front Plant Sci2019
31192450Genetic history of the population of Crete.Ann Hum Genet2019
31161210eFORGE v2.0: updated analysis of cell type-specific signal in epigenomic data.Bioinformatics2019
28526559A single nucleotide polymorphism of cyclin-dependent kinase inhibitor 1B (p27<sup>Kip1</sup>) associated with human vein graft failure affects growth of human venous adventitial cells but not smooth muscle cells.J Vasc Surg2018
28526559A single nucleotide polymorphism of cyclin-dependent kinase inhibitor 1B (p27<sup>Kip1</sup>) associated with human vein graft failure affects growth of human venous adventitial cells but not smooth muscle cells.J Vasc Surg2018
30202056Integrative detection and analysis of structural variation in cancer genomes.Nat Genet2018
30418432ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification.Nat Biotechnol2018
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Collaborators

Richard Sandstrom
Altius Institute for Biomedical Sciences
Co-authored papers 45
Robert E Thurman
University of Washington
Co-authored papers 40
Peter J Sabo
University of Washington
Co-authored papers 35
Jeff Vierstra
Altius Institute for Biomedical Sciences
Co-authored papers 21
Eric Haugen
Altius Institute for Biomedical Sciences
Co-authored papers 21
Shane Neph
Altius Institute for Biomedical Sciences
Co-authored papers 21
Alex P Reynolds
Altius Institute for Biomedical Sciences
Co-authored papers 20
Kristen Lee
Altius Institute for Biomedical Sciences
Co-authored papers 17
Rajinder Kaul
Altius Institute for Biomedical Sciences
Co-authored papers 17
Theresa K Canfield
University of Washington
Co-authored papers 16
William Stafford Noble
Co-authored papers 16
Richard Humbert
University of Washington
Co-authored papers 15
Hao Wang
Altius Institute for Biomedical Sciences
Co-authored papers 15
Sam John
National Cancer Institute
Co-authored papers 15
Matthew T Maurano
Institute for Systems Genetics, NYU School of Medicine
Co-authored papers 14
Michael O Dorschner
University of Washington
Co-authored papers 14
Audra K Johnson
Altius Institute for Biomedical Sciences
Co-authored papers 13
Job Dekker
University of Massachusetts Chan Medical School
Co-authored papers 13
Shamil R Sunyaev
Harvard Medical School
Co-authored papers 13
Manolis Kellis
Massachusetts Institute of Technology
Co-authored papers 12
Andrew B Stergachis
University of Washington School of Medicine
Co-authored papers 12
R S Hansen
University of Washington
Co-authored papers 12
Anthony Shafer
University of Washington
Co-authored papers 12
Fidencio Neri
Altius Institute for Biomedical Sciences
Co-authored papers 12
Morgan Diegel
Altius Institute for Biomedical Sciences
Co-authored papers 12
Molly Weaver
University of Kentucky
Co-authored papers 12
Bing Ren
Center for Epigenomics, University of California San Diego
Co-authored papers 11
Roderic Guig??
Barcelona Institute of Science and Technology
Co-authored papers 11
Eric Rynes
Altius Institute for Biomedical Sciences
Co-authored papers 10
George Stamatoyannopoulos
University of Washington
Co-authored papers 10
Release 1.2