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Author Details

Philipp Kapranov
1996
99
45
PMIDPaper TitleJournal TitlePublished Year
36596869Long non-coding RNAs: definitions, functions, challenges and recommendations.Nat Rev Mol Cell Biol2023
38001496Evidence for widespread existence of functional novel and non-canonical human transcripts.2023
37569439Genome-Wide Profiling of Endogenous Single-Stranded DNA Using the SSiNGLe-P1 Method.2023
37288167Transcriptomics for Clinical and Experimental Biology Research: Hang on a Seq.Adv Genet (Hoboken)2023
37468903Lessons from discovery of true ADAR RNA editing sites in a human cell line.2023
36835575Evidence for Existence of Multiple Functional Human Small RNAs Derived from Transcripts of Protein-Coding Genes.2023
37253670Traditional Chinese Medicine Treatment, Gua Sha, can Induce Subtle Molecular Changes in Gene Expression.2023
36681580Complexities of mammalian transcriptome revealed by targeted RNA enrichment techniques.2023
37298662Dynamic Patterns of Mammalian Mitochondrial DNA Replication Uncovered Using SSiNGLe-5'ES.2023
36198706Complex genomic patterns of abasic sites in mammalian DNA revealed by a high-resolution SSiNGLe-AP method.Nature Communications2022
36046604Hotspots of single-strand DNA "breakome" are enriched at transcriptional start sites of genes.Frontiers in Molecular Biosciences2022
35368711Methods to Analyze the Non-Coding RNA Interactome-Recent Advances and Challenges.Frontiers in Genetics2022
34544465Author Correction: Chromatin lncRNA Platr10 controls stem cell pluripotency by coordinating an intrachromosomal regulatory network.2021
33753927Hovlinc is a recently evolved class of ribozyme found in human lncRNA.Nature Chemical Biology2021
34016118Very long intergenic non-coding (vlinc) RNAs directly regulate multiple genes in cis and trans.BMC Biology2021
33717090FLI1 Induces Megakaryopoiesis Gene Expression Through WAS/WIP-Dependent and Independent Mechanisms; Implications for Wiskott-Aldrich Syndrome.Front Immunol2021
34721535Complex Age- and Cancer-Related Changes in Human Blood Transcriptome-Implications for Pan-Cancer Diagnostics.Frontiers in Genetics2021
33584810Emerging Technologies for Genome-Wide Profiling of DNA Breakage.Frontiers in Genetics2020
32020014A CRISPR/Cas13-based approach demonstrates biological relevance of vlinc class of long non-coding RNAs in anticancer drug response.Scientific Reports2020
32184809Editorial: Recent Progresses of Non-coding RNAs in Biological and Medical Research.Frontiers in Genetics2020
31894299FLI1 promotes protein translation via the transcriptional regulation of MKNK1 expression.Int J Oncol2020
32290841Reverse-genetics studies of lncRNAs-what we have learnt and paths forward.2020
31418797Diversification of Retinoblastoma Protein Function Associated with Cis and Trans Adaptations.Molecular Biology and Evolution2019
31862872Novel approach reveals genomic landscapes of single-strand DNA breaks with nucleotide resolution in human cells.Nature Communications2019
30098229Identification of novel GLI1 target genes and regulatory circuits in human cancer cells.Molecular Oncology2018
30017313Strategies to Annotate and Characterize Long Noncoding RNAs: Advantages and Pitfalls.Trends in Genetics2018
27001520Functional annotation of the vlinc class of non-coding RNAs using systems biology approach.Nucleic Acids Res2016
26111795The Bromodomain protein BRD4 controls HOTAIR, a long noncoding RNA essential for glioblastoma proliferation.Proceedings of the National Academy of Sciences of the United States of America2015
25869999The Landscape of long noncoding RNA classification.Trends in Genetics2015
25601475A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus.Nature Communications2015
25850412Erratum: A vlincRNA participates in senescence maintenance by relieving H2AZ-mediated repression at the INK4 locus.Nature Communications2015
25093498Efficient production of dual recombinant adeno-associated viral vectors for factor VIII delivery.Human gene therapy methods2014
24498275Proteomics analysis of co-purifying cellular proteins associated with rAAV vectors.PLoS ONE2014
24726458Identification of novel non-coding RNA-based negative feedback regulating the expression of the oncogenic transcription factor GLI1.Molecular Oncology2014
24924000Dark matter RNA illuminates the puzzle of genome-wide association studies.BMC Medicine2014
23517417Inflammation in soft tissue disorders: the evidence and potential role for a natural multi-target medication.Current Medical Research and Opinion2013
25401041and Model Systems for Hemophilia A Gene Therapy.2013
24077224Genome-wide analysis of A-to-I RNA editing by single-molecule sequencing in Drosophila.Nat Struct Mol Biol2013
24201902RNA editing regulates transposon-mediated heterochromatic gene silencing.Nat Commun2013
23876380VlincRNAs controlled by retroviral elements are a hallmark of pluripotency and cancer.Genome Biol2013
23563143On the importance of small changes in RNA expression.Methods2013
23677609A concept of eliminating nonhomologous recombination for scalable and safe AAV vector generation for human gene therapy.Nucleic Acids Research2013
23517420Genomics in the assessment of a multi-component, multi-target medication in soft tissue disorders.Current Medical Research and Opinion2013
22238572Evidence for transcript networks composed of chimeric RNAs in human cells.PLoS One2012
229613825-hmC in the brain is abundant in synaptic genes and shows differences at the exon-intron boundary.Nat Struct Mol Biol2012
22539933Dark matter RNA: an intelligent scaffold for the dynamic regulation of the nuclear information landscape.Front Genet2012
22536205Dark Matter RNA: Existence, Function, and Controversy.Frontiers in Genetics2012
22955620Landscape of transcription in human cells.Nature2012
23006825Intronic RNAs constitute the major fraction of the non-coding RNA in mammalian cells.BMC Genomics2012
22661986Genomic "dark matter": implications for understanding human disease mechanisms, diagnostics, and cures.Frontiers in Genetics2012
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