|
| 36755055 | AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms. | Commun Biol | 2023 |
| 37936309 | Alignment-based Protein Mutational Landscape Prediction: Doing More with Less. | Genome Biol Evol | 2023 |
| 37833283 | The importance of planning CT-based imaging features for machine learning-based prediction of pain response. | Sci Rep | 2023 |
| 38087198 | Rendering protein mutation movies with MutAmore. | BMC Bioinformatics | 2023 |
| 37567881 | Domain loss enabled evolution of novel functions in the snake three-finger toxin gene superfamily. | Nat Commun | 2023 |
| 37867198 | Prevalent bee venom genes evolved before the aculeate stinger and eusociality. | BMC Biol | 2023 |
| 36648327 | CATHe: detection of remote homologues for CATH superfamilies using embeddings from protein language models. | Bioinformatics | 2023 |
| 36504138 | Novel machine learning approaches revolutionize protein knowledge. | Trends Biochem Sci | 2023 |
| 36755055 | AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms. | Commun Biol | 2023 |
| 36865220 | Structural Analysis of Genomic and Proteomic Signatures Reveal Dynamic Expression of Intrinsically Disordered Regions in Breast Cancer and Tissue. | bioRxiv | 2023 |
| 37046811 | Development and Evaluation of MR-Based Radiogenomic Models to Differentiate Atypical Lipomatous Tumors from Lipomas. | Cancers (Basel) | 2023 |
| 36454227 | LambdaPP: Fast and accessible protein-specific phenotype predictions. | Protein Sci | 2023 |
| 38087198 | Rendering protein mutation movies with MutAmore. | BMC Bioinformatics | 2023 |
| 37867198 | Prevalent bee venom genes evolved before the aculeate stinger and eusociality. | BMC Biol | 2023 |
| 37833283 | The importance of planning CT-based imaging features for machine learning-based prediction of pain response. | Sci Rep | 2023 |
| 37936309 | Alignment-based Protein Mutational Landscape Prediction: Doing More with Less. | Genome Biol Evol | 2023 |
| 37567881 | Domain loss enabled evolution of novel functions in the snake three-finger toxin gene superfamily. | Nat Commun | 2023 |
| 37046811 | Development and Evaluation of MR-Based Radiogenomic Models to Differentiate Atypical Lipomatous Tumors from Lipomas. | Cancers (Basel) | 2023 |
| 36648327 | CATHe: detection of remote homologues for CATH superfamilies using embeddings from protein language models. | Bioinformatics | 2023 |
| 36504138 | Novel machine learning approaches revolutionize protein knowledge. | Trends Biochem Sci | 2023 |
| 36865220 | Structural Analysis of Genomic and Proteomic Signatures Reveal Dynamic Expression of Intrinsically Disordered Regions in Breast Cancer and Tissue. | bioRxiv | 2023 |
| 36454227 | LambdaPP: Fast and accessible protein-specific phenotype predictions. | Protein Sci | 2023 |
| 34232869 | ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning. | IEEE Trans Pattern Anal Mach Intell | 2022 |
| 36304335 | SETH predicts nuances of residue disorder from protein embeddings. | Front Bioinform | 2022 |
| 35702380 | Contrastive learning on protein embeddings enlightens midnight zone. | NAR Genom Bioinform | 2022 |
| 36279274 | Engineering indel and substitution variants of diverse and ancient enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP). | PLoS Comput Biol | 2022 |
| 35609601 | Protein language-model embeddings for fast, accurate, and alignment-free protein structure prediction. | Structure | 2022 |
| 36466147 | Nearest neighbor search on embeddings rapidly identifies distant protein relations. | Front Bioinform | 2022 |
| 34232869 | ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning. | IEEE Trans Pattern Anal Mach Intell | 2022 |
| 34791421 | ProteomicsDB: toward a FAIR open-source resource for life-science research. | Nucleic Acids Res | 2022 |
| 35702380 | Contrastive learning on protein embeddings enlightens midnight zone. | NAR Genom Bioinform | 2022 |
| 35609601 | Protein language-model embeddings for fast, accurate, and alignment-free protein structure prediction. | Structure | 2022 |
| 36466147 | Nearest neighbor search on embeddings rapidly identifies distant protein relations. | Front Bioinform | 2022 |
| 36279274 | Engineering indel and substitution variants of diverse and ancient enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP). | PLoS Comput Biol | 2022 |
| 36304335 | SETH predicts nuances of residue disorder from protein embeddings. | Front Bioinform | 2022 |
| 34791421 | ProteomicsDB: toward a FAIR open-source resource for life-science research. | Nucleic Acids Res | 2022 |
| 32672331 | Mutations in transmembrane proteins: diseases, evolutionary insights, prediction and comparison with globular proteins. | Brief Bioinform | 2021 |
| 36700108 | Light attention predicts protein location from the language of life. | Bioinform Adv | 2021 |
| 33961736 | Learned Embeddings from Deep Learning to Visualize and Predict Protein Sets. | Curr Protoc | 2021 |
| 33999203 | PredictProtein - Predicting Protein Structure and Function for 29 Years. | Nucleic Acids Res | 2021 |
| 33441905 | Embeddings from deep learning transfer GO annotations beyond homology. | Sci Rep | 2021 |
| 34328525 | Spectrum of Protein Location in Proteomes Captures Evolutionary Relationship Between Species. | J Mol Evol | 2021 |
| 32672331 | Mutations in transmembrane proteins: diseases, evolutionary insights, prediction and comparison with globular proteins. | Brief Bioinform | 2021 |
| 34519429 | SARS-CoV-2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms. | Mol Syst Biol | 2021 |
| 34672956 | Protein matchmaking through representation learning. | Cell Syst | 2021 |
| 36700108 | Light attention predicts protein location from the language of life. | Bioinform Adv | 2021 |
| 34672956 | Protein matchmaking through representation learning. | Cell Syst | 2021 |
| 34519429 | SARS-CoV-2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms. | Mol Syst Biol | 2021 |
| 34328525 | Spectrum of Protein Location in Proteomes Captures Evolutionary Relationship Between Species. | J Mol Evol | 2021 |
| 33961736 | Learned Embeddings from Deep Learning to Visualize and Predict Protein Sets. | Curr Protoc | 2021 |