Author details

Full Name

Joshua S Kaminker

Affiliation

Genentech Inc.

ORCID

Career Start Year

1998

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37477665	Single-Cell Transcriptomic Analysis Links Nonmyelinating Schwann Cells to Proinflammatory Response in the Lung.	J Immunol	2023
37477665	Single-Cell Transcriptomic Analysis Links Nonmyelinating Schwann Cells to Proinflammatory Response in the Lung.	J Immunol	2023
37344884	Whole genome sequencing across clinical trials identifies rare coding variants in GPR68 associated with chemotherapy-induced peripheral neuropathy.	Genome Med	2023
37388919	A systems biology approach uncovers novel disease mechanisms in age-related macular degeneration.	Cell Genom	2023
37352856	Nav1.7 is essential for nociceptor action potentials in the mouse in a manner independent of endogenous opioids.	Neuron	2023
37352856	Nav1.7 is essential for nociceptor action potentials in the mouse in a manner independent of endogenous opioids.	Neuron	2023
37388919	A systems biology approach uncovers novel disease mechanisms in age-related macular degeneration.	Cell Genom	2023
37344884	Whole genome sequencing across clinical trials identifies rare coding variants in GPR68 associated with chemotherapy-induced peripheral neuropathy.	Genome Med	2023
36001972	Disease-associated oligodendrocyte responses across neurodegenerative diseases.	Cell Rep	2022
36001972	Disease-associated oligodendrocyte responses across neurodegenerative diseases.	Cell Rep	2022
35354047	NMDA receptor-dependent prostaglandin-endoperoxide synthase 2 induction in neurons promotes glial proliferation during brain development and injury.	Cell Rep	2022
35354047	NMDA receptor-dependent prostaglandin-endoperoxide synthase 2 induction in neurons promotes glial proliferation during brain development and injury.	Cell Rep	2022
32960962	MicrobiomeExplorer: an R package for the analysis and visualization of microbial communities.	Bioinformatics	2021
33443214	Single-molecule nanopore sequencing reveals extreme target copy number heterogeneity in arylomycin-resistant mutants.	Proc Natl Acad Sci U S A	2021
32960962	MicrobiomeExplorer: an R package for the analysis and visualization of microbial communities.	Bioinformatics	2021
33443214	Single-molecule nanopore sequencing reveals extreme target copy number heterogeneity in arylomycin-resistant mutants.	Proc Natl Acad Sci U S A	2021
31831521	Genome-Wide Analysis of Differential Gene Expression and Splicing in Excitatory Neurons and Interneuron Subtypes.	J Neurosci	2020
31831521	Genome-Wide Analysis of Differential Gene Expression and Splicing in Excitatory Neurons and Interneuron Subtypes.	J Neurosci	2020
29346778	Diverse Brain Myeloid Expression Profiles Reveal Distinct Microglial Activation States and Aspects of Alzheimer's Disease Not Evident in Mouse Models.	Cell Rep	2018
29346778	Diverse Brain Myeloid Expression Profiles Reveal Distinct Microglial Activation States and Aspects of Alzheimer's Disease Not Evident in Mouse Models.	Cell Rep	2018
28778989	Progranulin deficiency causes impairment of autophagy and TDP-43 accumulation.	J Exp Med	2017
28814543	Loss of dual leucine zipper kinase signaling is protective in animal models of neurodegenerative disease.	Sci Transl Med	2017
28440222	Dual leucine zipper kinase-dependent PERK activation contributes to neuronal degeneration following insult.	Elife	2017
28778989	Progranulin deficiency causes impairment of autophagy and TDP-43 accumulation.	J Exp Med	2017
28106546	A Common Variant of IL-6R is Associated with Elevated IL-6 Pathway Activity in Alzheimer's Disease Brains.	J Alzheimers Dis	2017
28440222	Dual leucine zipper kinase-dependent PERK activation contributes to neuronal degeneration following insult.	Elife	2017
28106546	A Common Variant of IL-6R is Associated with Elevated IL-6 Pathway Activity in Alzheimer's Disease Brains.	J Alzheimers Dis	2017
28814543	Loss of dual leucine zipper kinase signaling is protective in animal models of neurodegenerative disease.	Sci Transl Med	2017
26768488	Complex regulation of ADAR-mediated RNA-editing across tissues.	BMC Genomics	2016
27097852	Untangling the brain's neuroinflammatory and neurodegenerative transcriptional responses.	Nat Commun	2016
26768488	Complex regulation of ADAR-mediated RNA-editing across tissues.	BMC Genomics	2016
27097852	Untangling the brain's neuroinflammatory and neurodegenerative transcriptional responses.	Nat Commun	2016
25877200	A resource for cell line authentication, annotation and quality control.	Nature	2015
25877200	A resource for cell line authentication, annotation and quality control.	Nature	2015
24976215	Activity-induced Nr4a1 regulates spine density and distribution pattern of excitatory synapses in pyramidal neurons.	Neuron	2014
25392500	Regulation of neuronal gene expression and survival by basal NMDA receptor activity: a role for histone deacetylase 4.	J Neurosci	2014
24976215	Activity-induced Nr4a1 regulates spine density and distribution pattern of excitatory synapses in pyramidal neurons.	Neuron	2014
25392500	Regulation of neuronal gene expression and survival by basal NMDA receptor activity: a role for histone deacetylase 4.	J Neurosci	2014
23431164	DLK initiates a transcriptional program that couples apoptotic and regenerative responses to axonal injury.	Proc Natl Acad Sci U S A	2013
24078713	ReportingTools: an automated result processing and presentation toolkit for high-throughput genomic analyses.	Bioinformatics	2013
23897821	Histone deacetylase (HDAC) inhibitor kinetic rate constants correlate with cellular histone acetylation but not transcription and cell viability.	J Biol Chem	2013
23685835	Identification and analysis of in vivo VEGF downstream markers link VEGF pathway activity with efficacy of anti-VEGF therapies.	Clin Cancer Res	2013
23431164	DLK initiates a transcriptional program that couples apoptotic and regenerative responses to axonal injury.	Proc Natl Acad Sci U S A	2013
24078713	ReportingTools: an automated result processing and presentation toolkit for high-throughput genomic analyses.	Bioinformatics	2013
23897821	Histone deacetylase (HDAC) inhibitor kinetic rate constants correlate with cellular histone acetylation but not transcription and cell viability.	J Biol Chem	2013
23685835	Identification and analysis of in vivo VEGF downstream markers link VEGF pathway activity with efficacy of anti-VEGF therapies.	Clin Cancer Res	2013
22340501	Death receptors DR6 and TROY regulate brain vascular development.	Dev Cell	2012
22340501	Death receptors DR6 and TROY regulate brain vascular development.	Dev Cell	2012
23015435	Spatially coordinated kinase signaling regulates local axon degeneration.	J Neurosci	2012
23015435	Spatially coordinated kinase signaling regulates local axon degeneration.	J Neurosci	2012

1 - 50 of 94

Verena Chung

Blavatnik Institute, Harvard Medical School

Career Start Year 2018

Number of shared co-authors 0

Hailiang Mei

Leiden University Medical Center

Career Start Year 2014

Number of shared co-authors 0

Rabi Murad

Sanford Burnham Prebys Medical Discovery Institute

Career Start Year 2014

Number of shared co-authors 2

Marta Gut

Universitat de Barcelona (UB)

Career Start Year 2010

Number of shared co-authors 4

Kathleen M Fisch

Center for Computational Biology and Bioinformatics, University of California

Career Start Year 2009

Number of shared co-authors 1

Riyue Bao

UPMC Hillman Cancer Center

Career Start Year 2007

Number of shared co-authors 1

Yue Lu

The University of Texas MD Anderson Cancer Center

Career Start Year 2006

Number of shared co-authors 0

Yongjun Zhao

Canada British Columbia Cancer Research Centre, University of British Columbia

Career Start Year 2005

Number of shared co-authors 1

Zhandong Liu

Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital

Career Start Year 2003

Number of shared co-authors 2

David E Larson

McDonnell Genome Institute, Washington University School of Medicine

Career Start Year 2003

Number of shared co-authors 7

Osvaldo Gra??a

Spanish National Cancer Research Centre-CNIO

Career Start Year 2002

Number of shared co-authors 0

Peter J Park

Harvard Medical School

Career Start Year 2001

Number of shared co-authors 10

Mikhail G Dozmorov

Virginia Commonwealth University

Career Start Year 2001

Number of shared co-authors 0

Elia Stupka

Center for Omics Sciences, IRCCS San Raffaele Scientific Institute

Career Start Year 2000

Number of shared co-authors 8

Stacey L Edwards

QIMR Berghofer Medical Research Institute

Career Start Year 1999

Number of shared co-authors 0

Shawn Levy

HudsonAlpha Institute for Biotechnology

Career Start Year 1999

Number of shared co-authors 6

Sarah J Wheelan

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1998

Number of shared co-authors 3

Shannon K McWeeney

Oregon Health & Science University, University of California Berkeley

Career Start Year 1997

Number of shared co-authors 0

Wolfgang Huber

Technische Universitat Munchen

Career Start Year 1995

Number of shared co-authors 4

Steven J M Jones

University of British Columbia

Career Start Year 1995

Number of shared co-authors 20

Alistair R R Forrest

RIKEN Center for Integrative Medical Sciences

Career Start Year 1994

Number of shared co-authors 2

Bianca Habermann

Aix Marseille University, CNRS, Turing Center for Living Systems

Career Start Year 1993

Number of shared co-authors 1

Marco A Marra

University of British Columbia

Career Start Year 1993

Number of shared co-authors 17

Stanley F Nelson

university of california los angeles

Career Start Year 1993

Number of shared co-authors 2

Samuel Aparicio

University of British Columbia

Career Start Year 1993

Number of shared co-authors 1

Zhiping Weng

University of Massachusetts Medical School

Career Start Year 1992

Number of shared co-authors 5

Winston Hide

Harvard Medical School

Career Start Year 1991

Number of shared co-authors 1

Sean M Grimmond

The University of Melbourne

Career Start Year 1990

Number of shared co-authors 3

Glenn S Cowley

Broad Institute of Harvard and MIT

Career Start Year 1990

Number of shared co-authors 0

John Quackenbush

Harvard T. H. Chan School of Public Health

Career Start Year 1989

Number of shared co-authors 7

row(s) 1 - 30 of 30

Gerald M Rubin

The University of Florida

Co-authored papers 6

Suzanna E Lewis

Lawrence Berkeley National Laboratory

Co-authored papers 5

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 5

Simon Prochnik

Joint Genome Institute

Co-authored papers 4

Chris Tyler-Smith

Wellcome Sanger Institute

Co-authored papers 4

Jonathan L Tupy

Lawrence Berkeley National Laboratory

Co-authored papers 3

Peter M Haverty

Co-authored papers 3