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Author Details

Olivier Bodenreider
National Institutes of Health
1993
171
28
Timothy Clark (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36539234A deep learning approach to identify missing is-a relations in SNOMED CT.J Am Med Inform Assoc2023
37528056Two complementary AI approaches for predicting UMLS semantic group assignment: heuristic reasoning and deep learning.J Am Med Inform Assoc2023
37407272A practical strategy to use the ICD-11 for morbidity coding in the United States without a clinical modification.J Am Med Inform Assoc2023
36093038Evaluating Biomedical Word Embeddings for Vocabulary Alignment at Scale in the UMLS Metathesaurus Using Siamese Networks.Proc Conf Assoc Comput Linguist Meet2022
35672978Sequential Mapping - A Novel Approach to Map from ICD-10-CM to ICD-11.Stud Health Technol Inform2022
36108322Context-Enriched Learning Models for Aligning Biomedical Vocabularies at Scale in the UMLS Metathesaurus.Proc Int World Wide Web Conf2022
34514472Biomedical Vocabulary Alignment at Scale in the UMLS Metathesaurus.Proc Int World Wide Web Conf2021
34383897Feasibility of replacing the ICD-10-CM with the ICD-11 for morbidity coding: A content analysis.J Am Med Inform Assoc2021
32364236The new International Classification of Diseases 11th edition: a comparative analysis with ICD-10 and ICD-10-CM.J Am Med Inform Assoc2020
36277606Siamese KG-LSTM: A deep learning model for enriching UMLS Metathesaurus synonymy.Int Conf Knowl Syst Eng2020
32940692Assessing the enrichment of dietary supplement coverage in the Unified Medical Language System.J Am Med Inform Assoc2020
31437910Automatic Identification of Individual Drugs in Death Certificates.Stud Health Technol Inform2019
36276234Comparing the representation of medicinal products in RxNorm and SNOMED CT - Consequences on interoperability.CEUR Workshop Proc2019
31437955Normalizing Dietary Supplement Product Names Using the RxNorm Model.Stud Health Technol Inform2019
29274386Auditing SNOMED CT hierarchical relations based on lexical features of concepts in non-lattice subgraphs.J Biomed Inform2018
36277122The New SNOMED CT International Medicinal Product Model.CEUR Workshop Proc2018
30157516Recent Developments in Clinical Terminologies - SNOMED CT, LOINC, and RxNorm.Yearb Med Inform2018
29295179"Hybrid Topics" - Facilitating the Interpretation of Topics Through the Addition of MeSH Descriptors to Bags of Words.Stud Health Technol Inform2017
28339775Mining non-lattice subgraphs for detecting missing hierarchical relations and concepts in SNOMED CT.J Am Med Inform Assoc2017
28339701Comparison of three commercial knowledge bases for detection of drug-drug interactions in clinical decision support.J Am Med Inform Assoc2017
28326432Harnessing scientific literature reports for pharmacovigilance. Prototype software analytical tool development and usability testing.Appl Clin Inform2017
29081385Toward multimodal signal detection of adverse drug reactions.J Biomed Inform2017
29295414Terminology Status APIs - Mapping Obsolete Codes to Current RxNorm, SNOMED CT, and LOINC Concepts.Stud Health Technol Inform2017
29295337MetaMap Lite in Excel: Biomedical Named-Entity Recognition for Non-Technical Users.Stud Health Technol Inform2017
29295235Interoperability of Disease Concepts in Clinical and Research Ontologies: Contrasting Coverage and Structure in the Disease Ontology and SNOMED CT.Stud Health Technol Inform2017
29295234Interoperability of Medication Classification Systems: Lessons Learned Mapping Established Pharmacologic Classes (EPCs) to SNOMED CT.Stud Health Technol Inform2017
29295220Trends in Fetal Medicine: A 10-Year Bibliometric Analysis of Prenatal Diagnosis.Stud Health Technol Inform2017
29295218Eliciting the Intension of Drug Value Sets - Principles and Quality Assurance Applications.Stud Health Technol Inform2017
26865946Interoperability between phenotypes in research and healthcare terminologies--Investigating partial mappings between HPO and SNOMED CT.J Biomed Semantics2016
36277863Identifying Missing Hierarchical Relations in SNOMED CT from Logical Definitions Based on the Lexical Features of Concept Names.CEUR Workshop Proc2016
29854569The National Library of Medicine Pill Image Recognition Challenge: An Initial Report.IEEE Appl Imag Pattern Recognit Workshop2016
26420780The digital revolution in phenotyping.Brief Bioinform2016
27195309Preparing for the ICD-10-CM Transition: Automated Methods for Translating ICD Codes in Clinical Phenotype Definitions.EGEMS (Wash DC)2016
27570659The Drug Data to Knowledge Pipeline: Large-Scale Claims Data Classification for Pharmacologic Insight.AMIA Jt Summits Transl Sci Proc2016
25661592Context-driven automatic subgraph creation for literature-based discovery.J Biomed Inform2015
26306232Mining Relation Reversals in the Evolution of SNOMED CT Using MapReduce.AMIA Jt Summits Transl Sci Proc2015
26262161Extending the coverage of phenotypes in SNOMED CT through post-coordination.Stud Health Technol Inform2015
26262156Fingerprinting Biomedical Terminologies--Automatic Classification and Visualization of Biomedical Vocabularies through UMLS Semantic Group Profiles.Stud Health Technol Inform2015
26342964Leveraging MEDLINE indexing for pharmacovigilance - Inherent limitations and mitigation strategies.J Biomed Inform2015
26958241Approaches to Supporting the Analysis of Historical Medication Datasets with RxNorm.AMIA Annu Symp Proc2015
25866612Using description logics to evaluate the consistency of drug-class membership relations in NDF-RT.J Biomed Semantics2015
25964850Evaluating drug-drug interaction information in NDF-RT and DrugBank.J Biomed Semantics2015
25937884Exploring adverse drug events at the class level.J Biomed Semantics2015
25101165A framework for assessing the consistency of drug classes across sources.J Biomed Semantics2014
25954433Desiderata for an authoritative Representation of MeSH in RDF.AMIA Annu Symp Proc2014
25954361Coverage of rare disease names in standard terminologies and implications for patients, providers, and research.AMIA Annu Symp Proc2014
25954332Analyzing U.S. prescription lists with RxNorm and the ATC/DDD Index.AMIA Annu Symp Proc2014
25632348A time-indexed reference standard of adverse drug reactions.Sci Data2014
25705725MaPLE: A MapReduce Pipeline for Lattice-based Evaluation and Its Application to SNOMED CT.Proc IEEE Int Conf Big Data2014
25750938Don't Like RDF Reification? Making Statements about Statements Using Singleton Property.Proc Int World Wide Web Conf2014
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Collaborators

National Institutes of Health
Co-authored papers 11
AI Institute, University of South Carolina
Co-authored papers 11
Columbia University in the City of New York.
Co-authored papers 10
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China-Japan Friendship Hospital
Co-authored papers 6
The University of Texas Health Science Center at Houston
Co-authored papers 5
Armand Trousseau Hospital, Sorbonne University
Co-authored papers 4
Center for Biomedical Informatics and Biostatistics, University of Arizona
Co-authored papers 3
University of Texas Health Science Center at Houston
Co-authored papers 3
National Institutes of Health
Co-authored papers 3
University of Amsterdam
Co-authored papers 3
Institute for Medical Informatics, Medical University of Graz
Co-authored papers 3
Lister Hill National Center for Biomedical Communications
Co-authored papers 3
Co-authored papers 3
Stanford University
Co-authored papers 3
Brown University, Rhode Island Hospital
Co-authored papers 2
MAASTRO Clinic
Co-authored papers 2
Co-authored papers 2
University of Virginia
Co-authored papers 2
Oracle Corporation
Co-authored papers 2
Institute of Data Science, Maastricht University
Co-authored papers 2
U.S. Public Health Service/U.S. FDA retired
Co-authored papers 2
University of Michigan Medical School ann arbor
Co-authored papers 2
Web Science Research Center, Rensselaer Polytechnic Institute
Co-authored papers 2
Institute of Artificial Intelligence, Medical University of Vienna
Co-authored papers 2
College of Medicine, University of Kentucky
Co-authored papers 2
University at Buffalo
Co-authored papers 2
ICAR-National Dairy Research Institute
Co-authored papers 2
Center for Biomedical Informatics, Brown University
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