Author details

Full Name

Laura Clarke

Affiliation

ORCID

Career Start Year

2002

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
34850121	Expression Atlas update: gene and protein expression in multiple species.	Nucleic Acids Res	2022
32703790	Cell type-specific novel long non-coding RNA and circular RNA in the BLUEPRINT hematopoietic transcriptomes atlas.	Haematologica	2021
33863903	Genetic perturbation of PU.1 binding and chromatin looping at neutrophil enhancers associates with autoimmune disease.	Nat Commun	2021
33188371	Guidelines for reporting single-cell RNA-seq experiments.	Nat Biotechnol	2020
32075696	Towards a European health research and innovation cloud (HRIC).	Genome Med	2020
31359622	An evaluation of sequencing coverage and genotyping strategies to assess neutral and adaptive diversity.	Mol Ecol Resour	2019
31064398	Correction to: Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome.	Genome Biol	2019
30673601	Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes.	Cell Rep	2019
29785028	The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia.	Nat Med	2018
30311252	FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community.	Anim Genet	2018
29876014	Multi-omics profiling reveals a distinctive epigenome signature for high-risk acute promyelocytic leukemia.	Oncotarget	2018
30184510	Dynamics of Transcription Regulation in Human Bone Marrow Myeloid Differentiation to Mature Blood Neutrophils.	Cell Rep	2018
29140475	The European Nucleotide Archive in 2017.	Nucleic Acids Res	2018
29563166	Repeat associated mechanisms of genome evolution and function revealed by the <i>Mus caroli</i> and <i>Mus pahari</i> genomes.	Genome Res	2018
29511174	Convergent genomic signatures of domestication in sheep and goats.	Nat Commun	2018
29320760	A Standard Nomenclature for Referencing and Authentication of Pluripotent Stem Cells.	Stem Cell Reports	2018
27733501	The human-induced pluripotent stem cell initiative-data resources for cellular genetics.	Nucleic Acids Res	2017
28334554	Rapid establishment of the European Bank for induced Pluripotent Stem Cells (EBiSC) - the Hot Start experience.	Stem Cell Res	2017
28489815	Common genetic variation drives molecular heterogeneity in human iPSCs.	Nature	2017
28531267	Alignment of 1000 Genomes Project reads to reference assembly GRCh38.	Gigascience	2017
28614302	Corrigendum: Common genetic variation drives molecular heterogeneity in human iPSCs.	Nature	2017
28703137	Platelet function is modified by common sequence variation in megakaryocyte super enhancers.	Nat Commun	2017
28396521	Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly.	Genome Res	2017
29067781	Report of the International Stem Cell Banking Initiative Workshop Activity: Current Hurdles and Progress in Seed-Stock Banking of Human Pluripotent Stem Cells.	Stem Cells Transl Med	2017
27899630	European Nucleotide Archive in 2016.	Nucleic Acids Res	2017
28283040	Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome.	Genome Biol	2017
27638885	The international Genome sample resource (IGSR): A worldwide collection of genome variation incorporating the 1000 Genomes Project data.	Nucleic Acids Res	2017
27863248	Î²-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance.	Cell	2016
27111036	Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences.	Nat Genet	2016
27337980	The Ensembl gene annotation system.	Database (Oxford)	2016
27453069	GO-FAANG meeting: a Gathering On Functional Annotation of Animal Genomes.	Anim Genet	2016
27898055	Increased DNA methylation variability in type 1 diabetes across three immune effector cell types.	Nat Commun	2016
27851971	Distinct Trends of DNA Methylation Patterning in the Innate and Adaptive Immune Systems.	Cell Rep	2016
27863955	The BLUEPRINT Data Analysis Portal.	Cell Syst	2016
27863251	Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells.	Cell	2016
26432246	An integrated map of structural variation in 2,504 human genomes.	Nature	2015
25904931	Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data.	Front Genet	2015
25854118	Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project.	Genome Biol	2015
25644835	Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers.	Genome Res	2015
26053498	Whole-genome fingerprint of the DNA methylome during human B cell differentiation.	Nat Genet	2015
24942464	Relationship between genome and epigenome--challenges and requirements for future research.	BMC Genomics	2014
25258084	Transcriptional diversity during lineage commitment of human blood progenitors.	Science	2014
24092746	Integrative annotation of variants from 1092 humans: application to cancer genomics.	Science	2013
22543379	The 1000 Genomes Project: data management and community access.	Nat Methods	2012
21917140	The functional spectrum of low-frequency coding variation.	Genome Biol	2011
19033362	Ensembl 2009.	Nucleic Acids Res	2009
18464734	Genome analysis of the platypus reveals unique signatures of evolution.	Nature	2008
18000006	Ensembl 2008.	Nucleic Acids Res	2008
17431167	Evolutionary and biomedical insights from the rhesus macaque genome.	Science	2007
17148474	Ensembl 2007.	Nucleic Acids Res	2007