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Author Details

Alejandro Reyes
Dana-Farber Cancer Institute
2012
15
13
PMIDPaper TitleJournal TitlePublished Year
31164141A practical guide to methods controlling false discoveries in computational biology.Genome Biol2019
31739789Correction to: RNA sequencing identifies novel non-coding RNA and exon-specific effects associated with cigarette smoking.BMC Med Genomics2019
30016409Reproducible and replicable comparisons using SummarizedBenchmark.Bioinformatics2019
31164141A practical guide to methods controlling false discoveries in computational biology.Genome Biol2019
31739789Correction to: RNA sequencing identifies novel non-coding RNA and exon-specific effects associated with cigarette smoking.BMC Med Genomics2019
30016409Reproducible and replicable comparisons using SummarizedBenchmark.Bioinformatics2019
29202200Alternative start and termination sites of transcription drive most transcript isoform differences across human tissues.Nucleic Acids Res2018
29202200Alternative start and termination sites of transcription drive most transcript isoform differences across human tissues.Nucleic Acids Res2018
29199022CTCF-Mediated Chromatin Loops between Promoter and Gene Body Regulate Alternative Splicing across Individuals.Cell Syst2017
28985737RNA sequencing identifies novel non-coding RNA and exon-specific effects associated with cigarette smoking.BMC Med Genomics2017
29199022CTCF-Mediated Chromatin Loops between Promoter and Gene Body Regulate Alternative Splicing across Individuals.Cell Syst2017
28985737RNA sequencing identifies novel non-coding RNA and exon-specific effects associated with cigarette smoking.BMC Med Genomics2017
26871632Myc Depletion Induces a Pluripotent Dormant State Mimicking Diapause.Cell2016
26871632Myc Depletion Induces a Pluripotent Dormant State Mimicking Diapause.Cell2016
25633503Orchestrating high-throughput genomic analysis with Bioconductor.Nat Methods2015
25633503Orchestrating high-throughput genomic analysis with Bioconductor.Nat Methods2015
26237553Single-cell transcriptome analysis reveals coordinated ectopic gene-expression patterns in medullary thymic epithelial cells.Nat Immunol2015
26237553Single-cell transcriptome analysis reveals coordinated ectopic gene-expression patterns in medullary thymic epithelial cells.Nat Immunol2015
25158935Identification of regulatory networks in HSCs and their immediate progeny via integrated proteome, transcriptome, and DNA methylome analysis.Cell Stem Cell2014
25418729Transcriptome-wide profiling and posttranscriptional analysis of hematopoietic stem/progenitor cell differentiation toward myeloid commitment.Stem Cell Reports2014
25158935Identification of regulatory networks in HSCs and their immediate progeny via integrated proteome, transcriptome, and DNA methylome analysis.Cell Stem Cell2014
25418729Transcriptome-wide profiling and posttranscriptional analysis of hematopoietic stem/progenitor cell differentiation toward myeloid commitment.Stem Cell Reports2014
23374342Direct competition between hnRNP C and U2AF65 protects the transcriptome from the exonization of Alu elements.Cell2013
24003148Drift and conservation of differential exon usage across tissues in primate species.Proc Natl Acad Sci U S A2013
23374342Direct competition between hnRNP C and U2AF65 protects the transcriptome from the exonization of Alu elements.Cell2013
24003148Drift and conservation of differential exon usage across tissues in primate species.Proc Natl Acad Sci U S A2013
22908908Personal receptor repertoires: olfaction as a model.BMC Genomics2012
22722343Detecting differential usage of exons from RNA-seq data.Genome Res2012
22722343Detecting differential usage of exons from RNA-seq data.Genome Res2012
22908908Personal receptor repertoires: olfaction as a model.BMC Genomics2012
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Collaborators

Wolfgang Huber
Technische Universitat Munchen
Co-authored papers 8
Simon Anders
Heidelberg University
Co-authored papers 4
Lars M Steinmetz
Stanford University
Co-authored papers 2
Blanca E Himes
University of Pennsylvania
Co-authored papers 2
Peter J Castaldi
Harvard Medical School
Co-authored papers 2
Edwin K Silverman
Brigham and Women's Hospital
Co-authored papers 2
Margaret M Parker
Co-authored papers 2
Craig P Hersh
Co-authored papers 2
Aabida Saferali
Co-authored papers 2
Valerie Obenchain
Fred Hutchinson Cancer Research Center
Co-authored papers 1
Robert Gentleman
Center for Computational Biomedicine, Harvard Medical School
Co-authored papers 1
James W MacDonald
University of Washington
Co-authored papers 1
Paul Bertone
Co-authored papers 1
Florian Hahne
1 Preclinical Safety, Novartis Institutes for Biomedical Research
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Michelle Nguyen
School of Medicine Stanford University
Co-authored papers 1
Thomas Girke
Institute for Integrative Genome Biology, University of California Riverside
Co-authored papers 1
Michael Lawrence
Center for Cancer Research, Massachusetts General Hospital, Harvard Medical School
Co-authored papers 1
Eric J Alm
Massachusetts Institute of Technology 21 Ames St. Cambridge
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Paul Shannon
Institute for Systems Biology
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Raphael Gottardo
Fred Hutchinson Cancer Center
Co-authored papers 1
Dongliang Ge
Department of Pharmacy, Liyang People's Hospital
Co-authored papers 1
Martin Morgan
Roswell Park Comprehensive Cancer Center
Co-authored papers 1
Marc Carlson
Fred Hutchinson Cancer Research Center
Co-authored papers 1
Benedikt Brors
German Cancer Research Center (DKFZ)
Co-authored papers 1
Levi Waldron
City University of New York School of Public Health
Co-authored papers 1
Vincent J Carey
Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 1
Dieter Weichenhan
German Cancer Research Center (DKFZ)
Co-authored papers 1
Michael I Love
University of North Carolina at Chapel Hill
Co-authored papers 1
Inigo Martincorena
Wellcome Sanger Institute
Co-authored papers 1
Sebastian M Waszak
University of California san francisco
Co-authored papers 1
Release 1.2