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Author Details

Jeong-Hyeon Choi
National Marine Biodiversity Institute of Korea
2000
70
34
PMIDPaper TitleJournal TitlePublished Year
35022698Chromosome-level genome assembly of the shuttles hoppfish, Periophthalmus modestus.Gigascience2022
33505439The Draft Genome Sequence of a New Land-Hopper <i>Platorchestia hallaensis</i>.Front Genet2021
32152293First draft genome for the sand-hopper Trinorchestia longiramus.Sci Data2020
31088832Metabolic Reprogramming by MYCN Confers Dependence on the Serine-Glycine-One-Carbon Biosynthetic Pathway.Cancer Res2019
33365428The complete mitochondrial genome of the sand-hopper <i>Trinorchestia longiramus</i> (Amphipoda: Talitridae).Mitochondrial DNA B Resour2019
31266538MYC deregulates TET1 and TET2 expression to control global DNA (hydroxy)methylation and gene expression to maintain a neoplastic phenotype in T-ALL.Epigenetics Chromatin2019
30837522Discovery and Validation of a Novel Neutrophil Activation Marker Associated with Obesity.Sci Rep2019
27858497High fat diet and exercise lead to a disrupted and pathogenic DNA methylome in mouse liver.Epigenetics2017
28132025Long non-coding RNAs transcribed by ERV-9 LTR retrotransposon act in cis to modulate long-range LTR enhancer function.Nucleic Acids Res2017
28264810Promoter Methylation Modulates Indoleamine 2,3-Dioxygenase 1 Induction by Activated T Cells in Human Breast Cancers.Cancer Immunol Res2017
28971909Hydroxyurea differentially modulates activator and repressors of γ-globin gene in erythroblasts of responsive and non-responsive patients with sickle cell disease in correlation with Index of Hydroxyurea Responsiveness.Haematologica2017
28035030CAME: identification of chromatin accessibility from nucleosome occupancy and methylome sequencing.Bioinformatics2017
26774480KDM4C and ATF4 Cooperate in Transcriptional Control of Amino Acid Metabolism.Cell Rep2016
26646321Dynamic reprogramming of DNA methylation in SETD2-deregulated renal cell carcinoma.Oncotarget2016
27705805Transcriptional Profiling Reveals a Common Metabolic Program in High-Risk Human Neuroblastoma and Mouse Neuroblastoma Sphere-Forming Cells.Cell Rep2016
27659530CD133+CD24lo defines a 5-Fluorouracil-resistant colon cancer stem cell-like phenotype.Oncotarget2016
27302925Phenotypic alteration of CD8+ T cells in chronic lymphocytic leukemia is associated with epigenetic reprogramming.Oncotarget2016
27561358OGS2: genome re-annotation of the jewel wasp Nasonia vitripennis.BMC Genomics2016
27502037Targeted next generation sequencing approach identifies eighteen new candidate genes in normosmic hypogonadotropic hypogonadism and Kallmann syndrome.Mol Cell Endocrinol2016
27197203Combined Inhibition of DNMT and HDAC Blocks the Tumorigenicity of Cancer Stem-like Cells and Attenuates Mammary Tumor Growth.Cancer Res2016
25421684Sequencing the cancer methylome.Methods Mol Biol2015
26444857Evolutionary divergence of core and post-translational circadian clock genes in the pitcher-plant mosquito, Wyeomyia smithii.BMC Genomics2015
26136424H3K9 Trimethylation Silences Fas Expression To Confer Colon Carcinoma Immune Escape and 5-Fluorouracil Chemoresistance.J Immunol2015
26233891Identification of Global DNA Methylation Signatures in Glioblastoma-Derived Cancer Stem Cells.J Genet Genomics2015
25908435DNMT1 is essential for mammary and cancer stem cell maintenance and tumorigenesis.Nat Commun2015
25792550iTagPlot: an accurate computation and interactive drawing tool for tag density plot.Bioinformatics2015
24198265Potential for sexual conflict assessed via testosterone-mediated transcriptional changes in liver and muscle of a songbird.J Exp Biol2014
25431334An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits.BMC Genomics2014
25453758Acute depletion redefines the division of labor among DNA methyltransferases in methylating the human genome.Cell Rep2014
25210800MEIS2 is essential for neuroblastoma cell survival and proliferation by transcriptional control of M-phase progression.Cell Death Dis2014
25294808Epigenetic signatures of alcohol abuse and hepatitis infection during human hepatocarcinogenesis.Oncotarget2014
25071008Impact of human MLL/COMPASS and polycomb complexes on the DNA methylome.Oncotarget2014
25013753Genome-wide analysis of HOXC9-induced neuronal differentiation of neuroblastoma cells.Genom Data2014
24982308Agrobacterium tumefaciens exoR controls acid response genes and impacts exopolysaccharide synthesis, horizontal gene transfer, and virulence gene expression.J Bacteriol2014
24958354Distinct and overlapping control of 5-methylcytosine and 5-hydroxymethylcytosine by the TET proteins in human cancer cells.Genome Biol2014
23684987An inherently bifunctional subset of Foxp3+ T helper cells is controlled by the transcription factor eos.Immunity2013
24315373The histone H3 methyltransferase G9A epigenetically activates the serine-glycine synthesis pathway to sustain cancer cell survival and proliferation.Cell Metab2013
24274069HOXC9 directly regulates distinct sets of genes to coordinate diverse cellular processes during neuronal differentiation.BMC Genomics2013
24130511Function and evolution of DNA methylation in Nasonia vitripennis.PLoS Genet2013
23829710Genetic analysis of Agrobacterium tumefaciens unipolar polysaccharide production reveals complex integrated control of the motile-to-sessile switch.Mol Microbiol2013
23613935Testosterone affects neural gene expression differently in male and female juncos: a role for hormones in mediating sexual dimorphism and conflict.PLoS One2013
22623972Gut pathology and responses to the microsporidium Nosema ceranae in the honey bee Apis mellifera.PLoS One2012
23177624Linking DNA methyltransferases to epigenetic marks and nucleosome structure genome-wide in human tumor cells.Cell Rep2012
23009593ESTclean: a cleaning tool for next-gen transcriptome shotgun sequencing.BMC Bioinformatics2012
22776250De novo transcriptome sequencing in a songbird, the dark-eyed junco (Junco hyemalis): genomic tools for an ecological model system.BMC Genomics2012
22534504Genome-wide DNA methylation analysis reveals novel epigenetic changes in chronic lymphocytic leukemia.Epigenetics2012
22495752GeneclusterViz: a tool for conserved gene cluster visualization, exploration and analysis.Bioinformatics2012
22665279Preparation of normalized cDNA libraries for 454 Titanium transcriptome sequencing.Methods Mol Biol2012
21177962The transcriptional diversity of 25 Drosophila cell lines.Genome Res2011
21785137Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing.Nucleic Acids Res2011
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Collaborators

John K Colbourne
University of Birmingham
Co-authored papers 15
Haixu Tang
Indiana University
Co-authored papers 8
Shuang Huang
Co-authored papers 6
Jacqueline A Lopez
University of Notre Dame
Co-authored papers 5
John H Werren
University of Rochester
Co-authored papers 5
Don Gilbert
Indiana University
Co-authored papers 4
Gregory D D Hurst
Institute of Infection, University of Liverpool
Co-authored papers 3
Timothy E Wilkes
Institute for Infection, University of Liverpool
Co-authored papers 3
Alistair C Darby
Institute of Infection, University of Liverpool
Co-authored papers 3
Jiong Yang
Co-authored papers 3
Dong Xu
University of Missouri
Co-authored papers 3
Miao Yu
Co-authored papers 2
Heewook Lee
Arizona State University
Co-authored papers 2
Michael E Pfrender
University of Notre Dame
Co-authored papers 2
Lewis R Roberts
Co-authored papers 2
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Co-authored papers 2
Daniel Gerlach
The Research Institute of Molecular Pathology
Co-authored papers 2
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University of Geneva Medical School
Co-authored papers 2
Amy V Paschall
Co-authored papers 2
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Mayo Clinic Arizona
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Alexandre Souvorov
Co-authored papers 2
Andreas Rechtsteiner
University of California
Co-authored papers 2
Zuojian Tang
Co-authored papers 2
Peer Bork
University of Wurzburg
Co-authored papers 2
Takuji Yamada
Tokyo Institute of Technology
Co-authored papers 2
William Kelley Thomas
Co-authored papers 2
Zachary D Smith
University of Maryland Baltimore County
Co-authored papers 2
Mengling Liu
NYU Grossman School of Medicine
Co-authored papers 2
Timothy B Sackton
Harvard University
Co-authored papers 2
Evgenia V Kriventseva
University of Geneva Medical School
Co-authored papers 2
Release 1.2