Author details

Full Name

David Osumi-Sutherland

Affiliation

European Bioinformatics Institute

ORCID

Career Start Year

2004

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37992296	Expression Atlas update: insights from sequencing data at both bulk and single cell level.	Nucleic Acids Res	2024
38000386	The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genesÂ and diseases across species.	Nucleic Acids Res	2024
37992296	Expression Atlas update: insights from sequencing data at both bulk and single cell level.	Nucleic Acids Res	2024
38000386	The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genesÂ and diseases across species.	Nucleic Acids Res	2024
36350656	The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource.	Nucleic Acids Res	2023
36350656	The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource.	Nucleic Acids Res	2023
37094905	Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics.	Syst Biol	2023
36973309	Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas.	Sci Data	2023
36776967	Virtual Fly Brain-An interactive atlas of the <i>Drosophila</i> nervous system.	Front Physiol	2023
36511598	COVoc and COVTriage: novel resources to support literature triage.	Bioinformatics	2023
37076585	The Ontology of Biological Attributes (OBA)-computational traits for the life sciences.	Mamm Genome	2023
37390046	A guide to the BRAIN Initiative Cell Census Network data ecosystem.	PLoS Biol	2023
36747660	The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences.	bioRxiv	2023
36693887	Brain Data Standards - A method for building data-driven cell-type ontologies.	Sci Data	2023
37117232	Author Correction: Brain Data Standards - A method for building data-driven cell-type ontologies.	Sci Data	2023
37390046	A guide to the BRAIN Initiative Cell Census Network data ecosystem.	PLoS Biol	2023
37117232	Author Correction: Brain Data Standards - A method for building data-driven cell-type ontologies.	Sci Data	2023
37076585	The Ontology of Biological Attributes (OBA)-computational traits for the life sciences.	Mamm Genome	2023
36973309	Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas.	Sci Data	2023
37094905	Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics.	Syst Biol	2023
36693887	Brain Data Standards - A method for building data-driven cell-type ontologies.	Sci Data	2023
36747660	The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences.	bioRxiv	2023
36511598	COVoc and COVTriage: novel resources to support literature triage.	Bioinformatics	2023
36776967	Virtual Fly Brain-An interactive atlas of the <i>Drosophila</i> nervous system.	Front Physiol	2023
35239393	Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly.	Science	2022
36208225	Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.	Database (Oxford)	2022
35616100	A Simple Standard for Sharing Ontological Mappings (SSSOM).	Database (Oxford)	2022
35239393	Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly.	Science	2022
34850121	Expression Atlas update: gene and protein expression in multiple species.	Nucleic Acids Res	2022
35616100	A Simple Standard for Sharing Ontological Mappings (SSSOM).	Database (Oxford)	2022
36208225	Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.	Database (Oxford)	2022
34850121	Expression Atlas update: gene and protein expression in multiple species.	Nucleic Acids Res	2022
34750578	Cell type ontologies of the Human Cell Atlas.	Nat Cell Biol	2021
34697637	OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.	Database (Oxford)	2021
34750582	Anatomical structures, cell types and biomarkers of the Human Reference Atlas.	Nat Cell Biol	2021
34750578	Cell type ontologies of the Human Cell Atlas.	Nat Cell Biol	2021
34697637	OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.	Database (Oxford)	2021
34750582	Anatomical structures, cell types and biomarkers of the Human Reference Atlas.	Nat Cell Biol	2021
30476213	Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources.	Nucleic Acids Res	2019
30476213	Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources.	Nucleic Acids Res	2019
31171447	SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse.	Neuron	2019
31548717	Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems.	Nat Genet	2019
31548717	Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems.	Nat Genet	2019
31171447	SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse.	Neuron	2019
29590361	Cell type discovery using single-cell transcriptomics: implications for ontological representation.	Hum Mol Genet	2018
29444698	Using OWL reasoning to support the generation of novel gene sets for enrichment analysis.	J Biomed Semantics	2018
29440116	Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology.	Circ Genom Precis Med	2018
29590361	Cell type discovery using single-cell transcriptomics: implications for ontological representation.	Hum Mol Genet	2018
29444698	Using OWL reasoning to support the generation of novel gene sets for enrichment analysis.	J Biomed Semantics	2018
29440116	Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology.	Circ Genom Precis Med	2018

1 - 50 of 88

Michael Ku Yu

University of California San Diego

Career Start Year 2014

Number of shared co-authors 1

Frederic B Bastian

University of Lausanne

Career Start Year 2010

Number of shared co-authors 22

Prashanti Manda

University of North Carolina at Greensboro

Career Start Year 2009

Number of shared co-authors 12

Alejandra Gonzalez-Beltran

Oxford e-Research Centre, University of Oxford

Career Start Year 2009

Number of shared co-authors 29

Janna Hastings

Institute for Implementation Science in Health Care, University of Zurich

Career Start Year 2008

Number of shared co-authors 22

Tim Beck

University of Leicester

Career Start Year 2007

Number of shared co-authors 24

Daniel Schober

Institute of Forensic Medicine, University of Bern

Career Start Year 2005

Number of shared co-authors 26

Larisa N Soldatova

University of London

Career Start Year 2005

Number of shared co-authors 21

Jennifer Deegan

Texas Epidemic Public Health Institute (TEPHI)

Career Start Year 2004

Number of shared co-authors 13

Anne Niknejad

University of Lausanne

Career Start Year 2004

Number of shared co-authors 20

Steven Vercruysse

Norwegian University of Science and Technology (NTNU)

Career Start Year 2004

Number of shared co-authors 7

Erick Antezana

Norwegian University of Science and Technology

Career Start Year 2004

Number of shared co-authors 10

Andrew I Su

The Scripps Research Institute

Career Start Year 2001

Number of shared co-authors 16

Norman Morrison

European Bioinformatics Institute

Career Start Year 2001

Number of shared co-authors 33

Michael Bada

Center for Health AI, University of Colorado Anschutz Medical Campus

Career Start Year 2000

Number of shared co-authors 19

Marco Roos

Leiden University Medical Center

Career Start Year 1999

Number of shared co-authors 27

Fabien Campagne

Weill Cornell Medical College

Career Start Year 1998

Number of shared co-authors 1

Midori A Harris

University of Cambridge

Career Start Year 1998

Number of shared co-authors 45

Philippe Rocca-Serra

University of Oxford

Career Start Year 1998

Number of shared co-authors 51

Robert Stevens

The University of Manchester

Career Start Year 1998

Number of shared co-authors 14

Nick Juty

University of Manchester

Career Start Year 1997

Number of shared co-authors 21

Katherine Wolstencroft

Leiden Institute of Advanced Computer Science, Leiden University

Career Start Year 1997

Number of shared co-authors 20

Susanna-Assunta Sansone

Oxford e-Research Centre, University of Oxford

Career Start Year 1997

Number of shared co-authors 53

Carole Goble

University of Manchester

Career Start Year 1993

Number of shared co-authors 28

Lawrence E Hunter

University of Colorado School of Medicine

Career Start Year 1993

Number of shared co-authors 8

Mark D Wilkinson

Universidad Politecnica de Madrid (UPM)

Career Start Year 1993

Number of shared co-authors 13

Kei-Hoi Cheung

Yale University School of Medicine

Career Start Year 1992

Number of shared co-authors 9

Phillip Lord

Newcastle University

Career Start Year 1991

Number of shared co-authors 23

Martin Kuiper

Norwegian University of Science and Technology

Career Start Year 1983

Number of shared co-authors 19

Stuart Aitken

Queensland Children's Hospital

Career Start Year 1982

Number of shared co-authors 4

row(s) 1 - 30 of 30

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 17

Melissa A Haendel

American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison

Co-authored papers 10

Nomi L Harris

Lawrence Berkely National Laboratory, Massachusetts Institute of Technology, Princeton University

Co-authored papers 10

James P Balhoff

Renaissance Computing Institute, University of North Carolina

Co-authored papers 9

Melissa A Haendel

Co-authored papers 9

Nicole Vasilevsky

Critical Path Institute

Co-authored papers 8

Julie A McMurry

University of Colorado - Anschutz Medical Campus

Co-authored papers 6

Helen Parkinson

European Bioinformatics Institute

Co-authored papers 6

Raymund Stefancsik

European Bioinformatics Institute

Co-authored papers 5

Ed S Lein

Allen Institute for Brain Science

Co-authored papers 5

Richard H Scheuermann

J. Craig Venter Institute

Co-authored papers 4

Ruth C Lovering

University College London, Institute for Cardiovascular Science

Co-authored papers 4

Rebecca E Foulger

Queen Mary University of London

Co-authored papers 4

Shawn Zheng Kai Tan

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 4

Ramona L Walls

Critical Path Institute

Co-authored papers 4

M??lanie Courtot

Ontario Institute for Cancer Research

Co-authored papers 4

Alan Ruttenberg

University at Buffalo

Co-authored papers 4

Brian D Aevermann

J. Craig Venter Institute

Co-authored papers 4

Susan M Bello

School of Pharmacy, University of Wisconsin

Co-authored papers 4

Damian Smedley

William Harvey Research Institute, Queen Mary University of London

Co-authored papers 4

Anne E Thessen

Biodiversity Information Standards, Coastal and Estuarine Research Federation, Oregon State University, Phycological Society of America, Society of Professional Consultants, The Data Detektiv, University of Colorado Anschutz Medical Campus, University of Maryland College Park, Women in the Enterprise of Science and Technology

Co-authored papers 4

Seth Carbon

Lawrence Berkeley National Laboratory

Co-authored papers 4

Monica C Munoz-Torres

University of Colorado Anschutz Medical Campus

Co-authored papers 4

Susan Tweedie

European Bioinformatics Institute

Co-authored papers 3

Alexander D Diehl

Jacobs School of Medicine and Biomedical Sciences, University at Buffalo