Author details

Full Name

Mark J Raftery

Affiliation

ORCID

Career Start Year

1990

Papers

162

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37142923	Evaluating Cellular Viability by iTRAQ Proteomic Profiling.		2023
37601354	Integrating proteomic data with metabolic modeling provides insight into key pathways of biofilms.		2023
37789858	Characterization of an archaeal virus-host system reveals massive genomic rearrangements in a laboratory strain.		2023
33928046	Comparative Phosphoproteomics of Classical Bordetellae Elucidates the Potential Role of Serine, Threonine and Tyrosine Phosphorylation in Biology and Virulence.	Frontiers in Cellular and Infection Microbiology	2021
33471535	Extending the Depth of Human Plasma Proteome Coverage Using Simple Fractionation Techniques.	Journal of Proteome Research	2021
33895784	Combination efficacy of ruxolitinib with standard-of-care drugs in CRLF2-rearranged Ph-like acute lymphoblastic leukemia.	Leukemia	2021
33508088	Truncated YY1 interacts with BASP1 through a 339KLK341 motif in YY1 and suppresses vascular smooth muscle cell growth and intimal hyperplasia after vascular injury.	Cardiovasc Res	2021
33322613	Comparative Analysis of Milk Triglycerides Profile between Jaffarabadi Buffalo and Holstein Friesian Cow.	Metabolites	2020
31703933	Surfaceome analysis of Australian epidemic Bordetella pertussis reveals potential vaccine antigens.	Vaccine	2020
32923607	Thermostable small-molecule inhibitor of angiogenesis and vascular permeability that suppresses a pERK-FosB/Î¿FosB-VCAM-1 axis.	Sci Adv	2020
32801162	Targeting TSLP-Induced Tyrosine Kinase Signaling Pathways in <i>CRLF2</i>-Rearranged Ph-like ALL.	Mol Cancer Res	2020
30711252	Extracellular signal-regulated kinase-1 phosphorylates early growth response-1 at serine 26.	Biochem Biophys Res Commun	2019
30658981	Sucrose Metabolism in Haloarchaea: Reassessment Using Genomics, Proteomics, and Metagenomics.	Applied and Environmental Microbiology	2019
31253704	Unexpected host dependency of Antarctic Nanohaloarchaeota.	Proc Natl Acad Sci U S A	2019
29464899	Proteomic Adaptation of Australian Epidemic Bordetella pertussis.	Proteomics	2018
30538686	Comparison of the Whole Cell Proteome and Secretome of Epidemic Strains From the 2008-2012 Australian Epidemic Under Sulfate-Modulating Conditions.	Frontiers in Microbiology	2018
29249821	AZA-MS: a novel multiparameter mass spectrometry method to determine the intracellular dynamics of azacitidine therapy in vivo.	Leukemia	2018
28242451	Characterisation of the Bordetella pertussis secretome under different media.	Journal of Proteomics	2017
28580786	Quantitative Performance Evaluator for Proteomics (QPEP): Web-based Application for Reproducible Evaluation of Proteomics Preprocessing Methods.	Journal of Proteome Research	2017
28827601	A plasmid from an Antarctic haloarchaeon uses specialized membrane vesicles to disseminate and infect plasmid-free cells.	Nature Microbiology	2017
28217912	Cold adaptation of the Antarctic haloarchaea Halohasta litchfieldiae and Halorubrum lacusprofundi.	Environmental Microbiology	2017
27725776	Leukocyte immunoglobulin-like receptor B4 regulates key signalling molecules involved in FcÎ³RI-mediated clathrin-dependent endocytosis and phagocytosis.	Scientific Reports	2016
26844590	Amyloid Plaque in the Human Brain Can Decompose from AÎ²(1-40/1-42) by Spontaneous Nonenzymatic Processes.	Analytical Chemistry	2016
26838458	Aptamer based peptide enrichment for quantitative analysis of gonadotropin-releasing hormone by LC-MS/MS.	Talanta	2016
27381087	Changes in the plasma proteome at asymptomatic and symptomatic stages of autosomal dominant Alzheimer's disease.	Sci Rep	2016
26960974	Quantitative phosphotyrosine profiling of patient-derived xenografts identifies therapeutic targets in pediatric leukemia.	Cancer Res	2016
26994078	Ecophysiological Distinctions of Haloarchaea from a Hypersaline Antarctic Lake as Determined by Metaproteomics.	Applied and Environmental Microbiology	2016
26119859	Specific global responses to N and Fe nutrition in toxic and non-toxic Microcystis aeruginosa.	Environmental Microbiology	2016
27762282	Application of Targeted Mass Spectrometry for the Quantification of Sirtuins in the Central Nervous System.	Scientific Reports	2016
27604872	A quantitative proteomics approach identifies ETV6 and IKZF1 as new regulators of an ERG-driven transcriptional network.	Nucleic Acids Research	2016
27519525	Isoaspartic acid is present at specific sites in myelin basic protein from multiple sclerosis patients: could this represent a trigger for disease onset?	Acta neuropathologica communications	2016
27874045	Morphological and proteomic analysis of biofilms from the Antarctic archaeon, Halorubrum lacusprofundi.	Scientific Reports	2016
25159666	Plasma protein profiling of mild cognitive impairment and Alzheimer's disease across two independent cohorts.	Journal of Alzheimer's Disease	2015
25785936	Upregulation of glycolytic enzymes, mitochondrial dysfunction and increased cytotoxicity in glial cells treated with Alzheimer's disease plasma.	PLoS ONE	2015
25486993	Transcriptomic and proteomic analyses reveal key innate immune signatures in the host response to the gastrointestinal pathogen Campylobacter concisus.	Infect Immun	2015
26125682	Antarctic archaea-virus interactions: metaproteome-led analysis of invasion, evasion and adaptation.	ISME Journal	2015
26528274	VarR controls colonization and virulence in the marine macroalgal pathogen Nautella italica R11.	Frontiers in Microbiology	2015
24702029	Determination of oxidative protein modifications using mass spectrometry.	Redox Report	2014
25502569	Cellular responses during morphological transformation in Azospirillum brasilense and Its flcA knockout mutant.	PLoS ONE	2014
25369144	Quantitative proteomics of delirium cerebrospinal fluid.	Translational Psychiatry	2014
24408985	Method development for quantification of five tear proteins using selected reaction monitoring (SRM) mass spectrometry.	Invest Ophthalmol Vis Sci	2014
24194567	Phosphoproteomic profiling identifies focal adhesion kinase as a mediator of docetaxel resistance in castrate-resistant prostate cancer.	Molecular Cancer Therapeutics	2014
24433274	Plasma protein profiling of Mild Cognitive Impairment and Alzheimer's disease using iTRAQ quantitative proteomics.	Proteome Science	2014
25214843	Examination of the Anaerobic Growth of Campylobacter concisus Strains.	International Journal of Microbiology	2014
25175814	Proteomic analysis of livers from fat-fed mice deficient in either PKCÎ´ or PKCÎµ identifies Htatip2 as a regulator of lipid metabolism.	Proteomics	2014
23067230	The pathogenic potential of Helicobacter pullorum: possible role for the type VI secretion system.	Helicobacter	2013
24085305	Glycosylation in a mammalian expression system is critical for the production of functionally active leukocyte immunoglobulin-like receptor A3 protein.	Journal of Biological Chemistry	2013
23856366	Heart research advances using database search engines, Human Protein Atlas and the Sydney Heart Bank.	Heart Lung Circ	2013
23874515	Shotgun redox proteomics: identification and quantitation of carbonylated proteins in the UVB-resistant marine bacterium, Photobacterium angustum S14.	PLoS ONE	2013
24320126	Detection and quantification of dermorphin and selected analogs in equine urine.	Bioanalysis	2013