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Author Details

Marian J A Groot Koerkamp
Princess Maxima Center for Pediatric Oncology Research
1983
87
36
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37152023Targeted locus amplification to develop robust patient-specific assays for liquid biopsies in pediatric solid tumors.Front Oncol2023
37662907ErbB2 (HER2)-CAR-NK-92 cells for enhanced immunotherapy of metastatic fusion-driven alveolar rhabdomyosarcoma.Front Immunol2023
35032896Infantile fibrosarcoma with an EGFR kinase domain duplication: Underlining a close relationship with congenital mesoblastic nephroma and highlighting a similar morphological spectrum.Ann Diagn Pathol2022
36402763PPARγ lipodystrophy mutants reveal intermolecular interactions required for enhancer activation.Nat Commun2022
36066422A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans.Genetics2022
35916583Mesenchymal tumor organoid models recapitulate rhabdomyosarcoma subtypes.EMBO Mol Med2022
34520050Shortening of membrane lipid acyl chains compensates for phosphatidylcholine deficiency in choline-auxotroph yeast.EMBO J2021
28681971Growth plate expression profiling: Large and small breed dogs provide new insights in endochondral bone formation.J Orthop Res2018
29440168FOXO Transcription Factors Both Suppress and Support Breast Cancer Progression.Cancer Res2018
29770973Genome-wide based model predicting recovery from portosystemic shunting after liver shunt attenuation in dogs.J Vet Intern Med2018
27979920Molecular mechanisms that distinguish TFIID housekeeping from regulatable SAGA promoters.EMBO J2017
28459846Gene expression patterns in the progression of canine copper-associated chronic hepatitis.PLoS One2017
28241084Characterization of bovine embryos cultured under conditions appropriate for sustaining human naïve pluripotency.PLoS One2017
28416598EBV MicroRNA BART16 Suppresses Type I IFN Signaling.J Immunol2017
26797113An endometrial gene expression signature accurately predicts recurrent implantation failure after IVF.Sci Rep2016
27791111FoxO6 affects Plxna4-mediated neuronal migration during mouse cortical development.Proc Natl Acad Sci U S A2016
27690330Mapping of a FEB3 homologous febrile seizure locus on mouse chromosome 2 containing candidate genes Scn1a and Scn3a.Eur J Neurosci2016
27384923Expression of ERAP2 and LST1 is increased before start of therapy in rheumatoid arthritis patients with good clinical response to glucocorticoids.Clin Exp Rheumatol2016
26681691Genome-wide analysis reveals NRP1 as a direct HIF1α-E2F7 target in the regulation of motorneuron guidance in vivo.Nucleic Acids Res2016
25648147FOXOs support the metabolic requirements of normal and tumor cells by promoting IDH1 expression.EMBO Rep2015
26684451Expression Profiling after Prolonged Experimental Febrile Seizures in Mice Suggests Structural Remodeling in the Hippocampus.PLoS One2015
26700642A high-resolution gene expression atlas of epistasis between gene-specific transcription factors exposes potential mechanisms for genetic interactions.BMC Biol2015
25888366A mRNA landscape of bovine embryos after standard and MAPK-inhibited culture conditions: a comparative analysis.BMC Genomics2015
25990325FOXO target gene CTDSP2 regulates cell cycle progression through Ras and p21(Cip1/Waf1).Biochem J2015
24463277Translation of branched-chain aminotransferase-1 transcripts is impaired in cells haploinsufficient for ribosomal protein genes.Exp Hematol2014
25590037Identification of Srp9 as a febrile seizure susceptibility gene.Ann Clin Transl Neurol2014
25157590The genomic landscape of compensatory evolution.PLoS Biol2014
24749075Detailed analysis of the genetic and epigenetic signatures of iPSC-derived mesodiencephalic dopaminergic neurons.Stem Cell Reports2014
24766815Large-scale genetic perturbations reveal regulatory networks and an abundance of gene-specific repressors.Cell2014
24952590Cell cycle population effects in perturbation studies.Mol Syst Biol2014
24945279Aberrant expression and distribution of enzymes of the urea cycle and other ammonia metabolizing pathways in dogs with congenital portosystemic shunts.PLoS One2014
24856209Insulin-FOXO3 signaling modulates circadian rhythms via regulation of clock transcription.Curr Biol2014
24886914The two main forms of histiocytic sarcoma in the predisposed Flatcoated retriever dog display variation in gene expression.PLoS One2014
24503642Uterine selection of human embryos at implantation.Sci Rep2014
23106268Lmx1a is an activator of Rgs4 and Grb10 and is responsible for the correct specification of rostral and medial mdDA neurons.Eur J Neurosci2013
26105890PP035. Genome-wide expression profile of first and second trimester human uterine natural killer cells.Pregnancy Hypertens2013
24066094Lmx1a encodes a rostral set of mesodiencephalic dopaminergic neurons marked by the Wnt/B-catenin signaling activator R-spondin 2.PLoS One2013
24089412Elucidation of the distal convoluted tubule transcriptome identifies new candidate genes involved in renal Mg(2+) handling.Am J Physiol Renal Physiol2013
23863478Specification of dopaminergic subsets involves interplay of En1 and Pitx3.Development2013
23936488Gene expression profiling of histiocytic sarcomas in a canine model: the predisposed flatcoated retriever dog.PLoS One2013
23954131Canonical Wnt signaling negatively modulates regulatory T cell function.Immunity2013
24002600Maspin is a marker for early recurrence in primary stage III and IV colorectal cancer.Br J Cancer2013
23451256Aberrant gene expression in dogs with portosystemic shunts.PLoS One2013
23545502Balancing of histone H3K4 methylation states by the Kdm5c/SMCX histone demethylase modulates promoter and enhancer function.Cell Rep2013
23360510Gene expression profiling of early intervertebral disc degeneration reveals a down-regulation of canonical Wnt signaling and caveolin-1 expression: implications for development of regenerative strategies.Arthritis Res Ther2013
22180533E2F7 represses a network of oscillating cell cycle genes to control S-phase progression.Nucleic Acids Res2012
23185333Exploring gene expression signatures for predicting disease free survival after resection of colorectal cancer liver metastases.PLoS One2012
23213462Genome wide expression profiling of the mesodiencephalic region identifies novel factors involved in early and late dopaminergic development.Biol Open2012
22820375Modulation of glutamine metabolism by the PI(3)K-PKB-FOXO network regulates autophagy.Nat Cell Biol2012
22629472Amygdala 14-3-3ζ as a novel modulator of escalating alcohol intake in mice.PLoS One2012
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Collaborators

Frank C P Holstege
Princess Maxima Center for Pediatric Oncology
Co-authored papers 54
Dik van Leenen
Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University
Co-authored papers 21
Philip Lijnzaad
Princess Maxima Center for Pediatric Oncology
Co-authored papers 8
Patrick Kemmeren
Princess Maxima Center for Pediatric Oncology
Co-authored papers 8
Mariel O Brok
Princess Maxima Center for Pediatric Oncology
Co-authored papers 7
Sander R van Hooff
Princess Maxima Center for Pediatric Oncology
Co-authored papers 7
Joris J Benschop
Center for Molecular Medicine, University Medical Center Utrecht
Co-authored papers 6
Tineke L Lenstra
the Netherlands Cancer Institute, Oncode Institute
Co-authored papers 5
Thanasis Margaritis
Princess Maxima Center for Pediatric Oncology
Co-authored papers 4
Katrin Sameith
Center for Molecular and Cellular Bioengineering
Co-authored papers 4
Loes A L van de Pasch
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 4
Nathalie Brabers
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 4
Cheuk W Ko
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 3
Edwin Cuppen
Hartwig Medical Foundation
Co-authored papers 3
Sake van Wageningen
Oncode Institute, The Netherlands Cancer Institute
Co-authored papers 3
Berend Snel
Utrecht University
Co-authored papers 3
Eva Apweiler
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 3
Jan J Molenaar
Co-authored papers 2
Antony J Miles
University Medical Centre Utrecht, Universiteitsweg
Co-authored papers 2
Michael S Kobor
University of British Columbia
Co-authored papers 2
Harm van Bakel
Icahn School of Medicine at Mount Sinai
Co-authored papers 2
Linda V Bakker
Wageningen University and Research
Co-authored papers 2
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 2
Albert J R Heck
Utrecht University
Co-authored papers 1
Calvin K Yip
The University of British Columbia
Co-authored papers 1
Raquel M Silva
Co-authored papers 1
Connie R Jimenez
Co-authored papers 1
Hindrik H D Kerstens
Co-authored papers 1
Marc van de Wetering
Princess Maxima Center for Pediatric Oncology
Co-authored papers 1
C Ellen van der Schoot
Co-authored papers 1
Release 1.2