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Author Details

Lei S Qi
Stanford University
2008
100
47
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36280707Advances in CRISPR therapeutics.Nat Rev Nephrol2023
37550295Cas9-mediated knockout of Ndrg2 enhances the regenerative potential of dendritic cells for wound healing.Nat Commun2023
37127707Stable expression of large transgenes via the knock-in of an integrase-deficient lentivirus.Nat Biomed Eng2023
36855120Nanoscale, antigen encounter-dependent, IL-12 delivery by CAR T cells plus PD-L1 blockade for cancer treatment.J Transl Med2023
36736311Reversing the Central Dogma: RNA-guided control of DNA in epigenetics and genome editing.Mol Cell2023
34127974Multi-color super-resolution imaging to study human coronavirus RNA during cellular infection.bioRxiv2022
35618183Hormone sensitive lipase ablation promotes bone regeneration.Biochim Biophys Acta Mol Basis Dis2022
35637351Scalable biological signal recording in mammalian cells using Cas12a base editors.Nat Chem Biol2022
35758824Enhanced Myogenesis by Silencing Myostatin with Nonviral Delivery of a dCas9 Ribonucleoprotein Complex.CRISPR J2022
35589813Broad-spectrum CRISPR-mediated inhibition of SARS-CoV-2 variants and endemic coronaviruses in vitro.Nat Commun2022
35414015Multiplexed genome regulation in vivo with hyper-efficient Cas12a.Nat Cell Biol2022
37214176High-content CRISPR screening.Nat Rev Methods Primers2022
36543165SARS-CoV-2 escapes direct NK cell killing through Nsp1-mediated downregulation of ligands for NKG2D.Cell Rep2022
35926435Corrigendum to "Hormone sensitive lipase ablation promotes bone regeneration" [Biochim. Biophys. Acta Mol. Basis Dis. Volume 1868, Issue 9, 1 September 2022, 166449].Biochim Biophys Acta Mol Basis Dis2022
35952672Single-cell transcriptome analysis of regenerating RGCs reveals potent glaucoma neural repair genes.Neuron2022
35951677Nested epistasis enhancer networks for robust genome regulation.Science2022
35981511What are the current bottlenecks in developing and applying CRISPR technologies?Cell Syst2022
35130925Dual CRISPR interference and activation for targeted reactivation of X-linked endogenous FOXP3 in human breast cancer cells.Mol Cancer2022
35128513Multi-color super-resolution imaging to study human coronavirus RNA during cellular infection.Cell Rep Methods2022
35145236The use of new CRISPR tools in cardiovascular research and medicine.Nat Rev Cardiol2022
35271371CRISPR-Mediated Synergistic Epigenetic and Transcriptional Control.CRISPR J2022
33420494CRISPR technologies for precise epigenome editing.Nat Cell Biol2021
37849948Durable CRISPR-Based Epigenetic Silencing.Biodes Res2021
33545038Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression.Cell2021
33893274CRISPR-based genome editing in primary human pancreatic islet cells.Nat Commun2021
33558716Engineering 3D genome organization.Nat Rev Genet2021
33778788A comprehensive analysis and resource to use CRISPR-Cas13 for broad-spectrum targeting of RNA viruses.Cell Rep Med2021
34499031Enhanced Cas12a multi-gene regulation using a CRISPR array separator.Elife2021
34428454Interrogation of the dynamic properties of higher-order heterochromatin using CRISPR-dCas9.Mol Cell2021
34480847Engineered miniature CRISPR-Cas system for mammalian genome regulation and editing.Mol Cell2021
34743703Contextual reprogramming of CAR-T cells for treatment of HER2<sup>+</sup> cancers.J Transl Med2021
34302664CRISPRi/a Screening with Human iPSCs.Methods Mol Biol2021
34337559Single-cell transcriptomic profiling reveals distinct mechanical responses between normal and diseased tendon progenitor cells.Cell Rep Med2021
32092381Therapeutic genome editing in cardiovascular diseases.Adv Drug Deliv Rev2021
32430322Low-frequency ultrasound-mediated cytokine transfection enhances T cell recruitment at local and distant tumor sites.Proc Natl Acad Sci U S A2020
32027839Multiple Input Sensing and Signal Integration Using a Split Cas12a System.Mol Cell2020
33346712Regenerating Urethral Striated Muscle by CRISPRi/dCas9-KRAB-Mediated Myostatin Silencing for Obesity-Associated Stress Urinary Incontinence.CRISPR J2020
32967676Lentiviral delivery of combinatorial CAR/CRISPRi circuit into human primary T cells is enhanced by TBK1/IKKÉ¿ complex inhibitor BX795.J Transl Med2020
32900183Double Emulsion Picoreactors for High-Throughput Single-Cell Encapsulation and Phenotyping via FACS.Anal Chem2020
32151271A benchmark of algorithms for the analysis of pooled CRISPR screens.Genome Biol2020
32210226Transient non-integrative expression of nuclear reprogramming factors promotes multifaceted amelioration of aging in human cells.Nat Commun2020
32205365Fibrinogen Alpha Chain Knockout Promotes Tumor Growth and Metastasis through Integrin-AKT Signaling Pathway in Lung Cancer.Mol Cancer Res2020
32353252Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza.Cell2020
30643127Anti-CRISPR-mediated control of gene editing and synthetic circuits in eukaryotic cells.Nat Commun2019
37850090Biodesign Research to Advance the Principles and Applications of Biosystems Design.Biodes Res2019
31748579Identification of cell context-dependent YAP-associated proteins reveals β<sub>1</sub> and β<sub>4</sub> integrin mediate YAP translocation independently of cell spreading.Sci Rep2019
29958882A CRISPR-dCas Toolbox for Genetic Engineering and Synthetic Biology.J Mol Biol2019
31348878Site-Programmable Transposition: Shifting the Paradigm for CRISPR-Cas Systems.Mol Cell2019
31488703CRISPR-mediated live imaging of genome editing and transcription.Science2019
31015465YAP-independent mechanotransduction drives breast cancer progression.Nat Commun2019
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Collaborators

Adam P Arkin
Lawrence Berkeley National Laboratory
Co-authored papers 10
Jonathan S Weissman
Whitehead Institute for Biomedical Research
Co-authored papers 10
Xueqiu Lin
Co-authored papers 10
Wendell A Lim
University of California san francisco
Co-authored papers 9
Luke A Gilbert
Arc Institute
Co-authored papers 9
Meng Chen
Sean N. Parker Center for Allergy and Asthma Research at Stanford University
Co-authored papers 4
Jennifer A Doudna
Innovative Genomics Institute, University of California berkeley
Co-authored papers 4
Chang C Liu
University of California irvine
Co-authored papers 4
Dan Du
University of California san francisco
Co-authored papers 4
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 3
Jason M Peters
School of Pharmacy, University of Wisconsin-Madison
Co-authored papers 3
Wing Hung Wong
Stanford University
Co-authored papers 3
Prashant Mali (CM4AI)
University of California San Diego
Co-authored papers 3
Vittorio Sebastiano
Stanford University
Co-authored papers 2
Thomas A Rando
Stanford University
Co-authored papers 2
Trey Ideker (CM4AI)
University of California San Diego
Co-authored papers 2
Assen Roguev
University of California, USA Quantitative Biosciences Institute (QBI) san francisco
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John Paul Shen
The University of Texas MD Anderson Cancer Center
Co-authored papers 2
Jacqueline E Villalta
University of California san francisco
Co-authored papers 2
Carol A Gross
University of California san francisco
Co-authored papers 2
David E Gordon
Emory University
Co-authored papers 2
Max A Horlbeck
Broad Institute of MIT and Harvard
Co-authored papers 2
Kyle S Sanchez
University of California San Diego
Co-authored papers 1
Luke M Judge
Gladstone Institutes
Co-authored papers 1
Miguel Ramalho-Santos
University of Toronto
Co-authored papers 1
Roman Sasik
Center for Computational Biology & Bioinformatics (CCBB), University of California
Co-authored papers 1
James Zou
Stanford University
Co-authored papers 1
Annie Truong
Gladstone Institutes
Co-authored papers 1
Kristin Holmes
Gladstone Institute of Cardiovascular Disease
Co-authored papers 1
David M Barrett
Co-authored papers 1
Release 1.2