|
| 37106037 | Characterizing expression changes in noncoding RNAs during aging and heterochronic parabiosis across mouse tissues. | Nat Biotechnol | 2024 |
| 35311638 | Prolonged silent carriage, genomic virulence potential and transmission between staff and patients characterize a neonatal intensive care unit (NICU) outbreak of methicillin-resistant <i>Staphylococcus aureus</i> (MRSA). | Infect Control Hosp Epidemiol | 2023 |
| 37808827 | Prolonged delays in human microbiota transmission after a controlled antibiotic perturbation. | bioRxiv | 2023 |
| 37712060 | In host evolution of beta lactam resistance during active treatment for <i>Pseudomonas aeruginosa</i> bacteremia. | Front Cell Infect Microbiol | 2023 |
| 37938000 | Hepatitis C virus infects and perturbs liver stem cells. | mBio | 2023 |
| 37348505 | Ultra-deep sequencing of Hadza hunter-gatherers recovers vanishing gut microbes. | Cell | 2023 |
| 37316563 | Purification and functional characterization of novel human skeletal stem cell lineages. | Nat Protoc | 2023 |
| 37468622 | KRAS(G12D) drives lepidic adenocarcinoma through stem-cell reprogramming. | Nature | 2023 |
| 37009900 | Integrated host/microbe metagenomics enables accurate lower respiratory tract infection diagnosis in critically ill children. | J Clin Invest | 2023 |
| 36711771 | Assembly of gut-derived bacterial communities follows "early-bird" resource utilization dynamics. | bioRxiv | 2023 |
| 36507688 | A 2-Gene Host Signature for Improved Accuracy of COVID-19 Diagnosis Agnostic to Viral Variants. | mSystems | 2023 |
| 36931245 | Purification and characterization of human neural stem and progenitor cells. | Cell | 2023 |
| 35051349 | Establishment and characterization of stable, diverse, fecal-derived in vitro microbial communities that model the intestinal microbiota. | Cell Host Microbe | 2022 |
| 35679413 | Robust variation in infant gut microbiome assembly across a spectrum of lifestyles. | Science | 2022 |
| 35803954 | Upper airway gene expression shows a more robust adaptive immune response to SARS-CoV-2 in children. | Nat Commun | 2022 |
| 35544065 | Lower respiratory tract infections in children requiring mechanical ventilation: a multicentre prospective surveillance study incorporating airway metagenomics. | Lancet Microbe | 2022 |
| 35858312 | Two distinct evolutionary conserved neural degeneration pathways characterized in a colonial chordate. | Proc Natl Acad Sci U S A | 2022 |
| 35396487 | DiMeLo-seq: a long-read, single-molecule method for mapping protein-DNA interactions genome wide. | Nat Methods | 2022 |
| 35818068 | Metagenomic prediction of antimicrobial resistance in critically ill patients with lower respiratory tract infections. | Genome Med | 2022 |
| 35752172 | Machine-learning-optimized Cas12a barcoding enables the recovery of single-cell lineages and transcriptional profiles. | Mol Cell | 2022 |
| 36516757 | The hepatic integrated stress response suppresses the somatotroph axis to control liver damage in nonalcoholic fatty liver disease. | Cell Rep | 2022 |
| 36526371 | Concordance of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing. | Life Sci Alliance | 2022 |
| 36070752 | Design, construction, and in vivo augmentation of a complex gut microbiome. | Cell | 2022 |
| 36042219 | Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy. | Nat Commun | 2022 |
| 36238714 | Ultra-deep Sequencing of Hadza Hunter-Gatherers Recovers Vanishing Gut Microbes. | bioRxiv | 2022 |
| 36266337 | Integrated host-microbe plasma metagenomics for sepsis diagnosis in a prospective cohort of critically ill adults. | Nat Microbiol | 2022 |
| 35239393 | Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly. | Science | 2022 |
| 35238677 | Discovering disease-causing pathogens in resource-scarce Southeast Asia using a global metagenomic pathogen monitoring system. | Proc Natl Acad Sci U S A | 2022 |
| 35140405 | Early prediction of preeclampsia in pregnancy with cell-free RNA. | Nature | 2022 |
| 33432193 | Molecular characterization of selectively vulnerable neurons in Alzheimer's disease. | Nat Neurosci | 2021 |
| 33503429 | Sexual and asexual development: two distinct programs producing the same tunicate. | Cell Rep | 2021 |
| 34911763 | Single-cell quantification of a broad RNA spectrum reveals unique noncoding patterns associated with cell types and states. | Proc Natl Acad Sci U S A | 2021 |
| 34473943 | Quantifying rapid bacterial evolution and transmission within the mouse intestine. | Cell Host Microbe | 2021 |
| 34381212 | Aged skeletal stem cells generate an inflammatory degenerative niche. | Nature | 2021 |
| 34462739 | Upper airway gene expression reveals a more robust innate and adaptive immune response to SARS-CoV-2 in children compared with older adults. | Res Sq | 2021 |
| 34805683 | uPIC-M: Efficient and Scalable Preparation of Clonal Single Mutant Libraries for High-Throughput Protein Biochemistry. | ACS Omega | 2021 |
| 34417469 | Metagenomic characterization of swine slurry in a North American swine farm operation. | Sci Rep | 2021 |
| 34280086 | Distinct skeletal stem cell types orchestrate long bone skeletogenesis. | Elife | 2021 |
| 32286221 | Chloride channels regulate differentiation and barrier functions of the mammalian airway. | Elife | 2020 |
| 33031771 | Recovery of the Gut Microbiota after Antibiotics Depends on Host Diet, Community Context, and Environmental Reservoirs. | Cell Host Microbe | 2020 |
| 33208946 | A molecular cell atlas of the human lung from single-cell RNA sequencing. | Nature | 2020 |
| 33203890 | Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses. | Nat Commun | 2020 |
| 32864588 | Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: A retrospective cohort study of patients with and without COVID-19. | EClinicalMedicine | 2020 |
| 32766602 | High-throughput SARS-CoV-2 and host genome sequencing from single nasopharyngeal swabs. | medRxiv | 2020 |
| 32822576 | Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing. | Cell | 2020 |
| 32732230 | Draft Genome Sequence of an Extensively Drug-Resistant Salmonella enterica Serovar Typhi Strain from a Returned Traveler from Pakistan. | Microbiol Resour Announc | 2020 |
| 32753494 | Bacterial Evolution in High-Osmolarity Environments. | mBio | 2020 |
| 32511488 | Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: a comparison of patients with and without COVID-19. | medRxiv | 2020 |
| 32511476 | Upper airway gene expression differentiates COVID-19 from other acute respiratory illnesses and reveals suppression of innate immune responses by SARS-CoV-2. | medRxiv | 2020 |
| 30606613 | Developmental Heterogeneity of Microglia and Brain Myeloid Cells Revealed by Deep Single-Cell RNA Sequencing. | Neuron | 2019 |