Author details

Full Name

Kate R Rosenbloom

Affiliation

ORCID

Career Start Year

2004

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
35088925	Variant interpretation: UCSC Genome Browser Recommended Track Sets.	Hum Mutat	2022
34718705	The UCSC Genome Browser database: 2022 update.	Nucleic Acids Res	2022
33221922	The UCSC Genome Browser database: 2021 update.	Nucleic Acids Res	2021
31691824	UCSC Genome Browser enters 20th year.	Nucleic Acids Res	2020
30407534	The UCSC Genome Browser database: 2019 update.	Nucleic Acids Res	2019
29106570	The UCSC Genome Browser database: 2018 update.	Nucleic Acids Res	2018
27899642	The UCSC Genome Browser database: 2017 update.	Nucleic Acids Res	2017
28398314	Toil enables reproducible, open source, big biomedical data analyses.	Nat Biotechnol	2017
26590259	The UCSC Genome Browser database: 2016 update.	Nucleic Acids Res	2016
26740527	UCSC Data Integrator and Variant Annotation Integrator.	Bioinformatics	2016
25428374	The UCSC Genome Browser database: 2015 update.	Nucleic Acids Res	2015
25369122	Use of ENCODE resources to characterize novel proteoforms and missing proteins in the human proteome.	J Proteome Res	2015
24270787	The UCSC Genome Browser database: 2014 update.	Nucleic Acids Res	2014
25409824	A comparative encyclopedia of DNA elements in the mouse genome.	Nature	2014
25685613	The UCSC Ebola Genome Portal.	PLoS Curr	2014
23193274	ENCODE data in the UCSC Genome Browser: year 5 update.	Nucleic Acids Res	2013
23155063	The UCSC Genome Browser database: extensions and updates 2013.	Nucleic Acids Res	2013
22075998	ENCODE whole-genome data in the UCSC Genome Browser: update 2012.	Nucleic Acids Res	2012
22889292	An encyclopedia of mouse DNA elements (Mouse ENCODE).	Genome Biol	2012
22086951	The UCSC Genome Browser database: extensions and updates 2011.	Nucleic Acids Res	2012
20959295	The UCSC Genome Browser database: update 2011.	Nucleic Acids Res	2011
21037257	ENCODE whole-genome data in the UCSC genome browser (2011 update).	Nucleic Acids Res	2011
19906737	The UCSC Genome Browser database: update 2010.	Nucleic Acids Res	2010
19920125	ENCODE whole-genome data in the UCSC Genome Browser.	Nucleic Acids Res	2010
20100942	Rodent evolution: back to the root.	Molecular Biology and Evolution	2010
19858363	Detection of nonneutral substitution rates on mammalian phylogenies.	Genome Res	2010
18996895	The UCSC Genome Browser Database: update 2009.	Nucleic Acids Res	2009
18629665	Phylogenomic resources at the UCSC Genome Browser.	Methods Mol Biol	2008
18086701	The UCSC Genome Browser Database: 2008 update.	Nucleic Acids Res	2008
17571346	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.	Nature	2007
17567995	Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome.	Genome Res	2007
17993665	Comparative genomic analysis using the UCSC genome browser.	Methods Mol Biol	2007
17166863	The ENCODE Project at UC Santa Cruz.	Nucleic Acids Res	2007
17984227	28-way vertebrate alignment and conservation track in the UCSC Genome Browser.	Genome Res	2007
17142222	The UCSC genome browser database: update 2007.	Nucleic Acids Res	2007
16381938	The UCSC Genome Browser Database: update 2006.	Nucleic Acids Res	2006
16628248	Identification and classification of conserved RNA secondary structures in the human genome.	PLoS Comput Biol	2006
17040131	Forces shaping the fastest evolving regions in the human genome.	PLoS Genet	2006
16024819	Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.	Genome Res	2005
15057822	Genome sequence of the Brown Norway rat yields insights into mammalian evolution.	Nature	2004
15060014	Aligning multiple genomic sequences with the threaded blockset aligner.	Genome Res	2004