Author details

Full Name

Avinash Ramu

Affiliation

Washington University School of Medicine

ORCID

Career Start Year

2012

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37226217	Transcription factor fluctuations underlie cell-to-cell variability in a signaling pathway response.	Genetics	2023
37662358	Active learning of enhancer and silencer regulatory grammar in photoreceptors.	bioRxiv	2023
36949070	Integrated analysis of genomic and transcriptomic data for the discovery of splice-associated variants in cancer.	Nat Commun	2023
37053313	The origins and functional effects of postzygotic mutations throughout the human life span.	Science	2023
37226217	Transcription factor fluctuations underlie cell-to-cell variability in a signaling pathway response.	Genetics	2023
37662358	Active learning of enhancer and silencer regulatory grammar in photoreceptors.	bioRxiv	2023
36949070	Integrated analysis of genomic and transcriptomic data for the discovery of splice-associated variants in cancer.	Nat Commun	2023
37053313	The origins and functional effects of postzygotic mutations throughout the human life span.	Science	2023
35121658	A dominant negative variant of <i>RAB5B</i> disrupts maturation of surfactant protein B and surfactant protein C.	Proc Natl Acad Sci U S A	2022
35121658	A dominant negative variant of <i>RAB5B</i> disrupts maturation of surfactant protein B and surfactant protein C.	Proc Natl Acad Sci U S A	2022
33239672	The genetic architecture of sporadic and multiple consecutive miscarriage.	Nat Commun	2020
33239672	The genetic architecture of sporadic and multiple consecutive miscarriage.	Nat Commun	2020
30224629	Recurrent WNT pathway alterations are frequent in relapsed small cell lung cancer.	Nat Commun	2018
30224629	Recurrent WNT pathway alterations are frequent in relapsed small cell lung cancer.	Nat Commun	2018
29022589	Dynamic landscape and regulation of RNA editing in mammals.	Nature	2017
29022589	Dynamic landscape and regulation of RNA editing in mammals.	Nature	2017
28138153	CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer.	Nat Genet	2017
28138153	CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer.	Nat Genet	2017
27029710	A genomic case study of mixed fibrolamellar hepatocellular carcinoma.	Ann Oncol	2016
27181063	Comprehensive genomic analysis reveals FLT3 activation and a therapeutic strategy for a patient with relapsed adult B-lymphoblastic leukemia.	Exp Hematol	2016
27029710	A genomic case study of mixed fibrolamellar hepatocellular carcinoma.	Ann Oncol	2016
26563128	A Phase I Trial of BKM120 (Buparlisib) in Combination with Fulvestrant in Postmenopausal Women with Estrogen Receptor-Positive Metastatic Breast Cancer.	Clin Cancer Res	2016
26563128	A Phase I Trial of BKM120 (Buparlisib) in Combination with Fulvestrant in Postmenopausal Women with Estrogen Receptor-Positive Metastatic Breast Cancer.	Clin Cancer Res	2016
27181063	Comprehensive genomic analysis reveals FLT3 activation and a therapeutic strategy for a patient with relapsed adult B-lymphoblastic leukemia.	Exp Hematol	2016
25409150	Convergent loss of PTEN leads to clinical resistance to a PI(3)KÎ± inhibitor.	Nature	2015
25409150	Convergent loss of PTEN leads to clinical resistance to a PI(3)KÎ± inhibitor.	Nature	2015
26645048	Optimizing cancer genome sequencing and analysis.	Cell Syst	2015
26158448	Genome Modeling System: A Knowledge Management Platform for Genomics.	PLoS Comput Biol	2015
26645048	Optimizing cancer genome sequencing and analysis.	Cell Syst	2015
26158448	Genome Modeling System: A Knowledge Management Platform for Genomics.	PLoS Comput Biol	2015
23555275	Human spermatogenic failure purges deleterious mutation load from the autosomes and both sex chromosomes, including the gene DMRT1.	PLoS Genet	2013
23975140	DeNovoGear: de novo indel and point mutation discovery and phasing.	Nat Methods	2013
23555275	Human spermatogenic failure purges deleterious mutation load from the autosomes and both sex chromosomes, including the gene DMRT1.	PLoS Genet	2013
23975140	DeNovoGear: de novo indel and point mutation discovery and phasing.	Nat Methods	2013
23033843	A scalable method for identifying frequent subtrees in sets of large phylogenetic trees.	BMC Bioinformatics	2012
23033843	A scalable method for identifying frequent subtrees in sets of large phylogenetic trees.	BMC Bioinformatics	2012

1 - 36 of 36

Shantao Li

Yale University

Career Start Year 2015

Number of shared co-authors 2

Amin Zia

Ontario Institute for Cancer Research

Career Start Year 2011

Number of shared co-authors 0

Marta Gut

Universitat de Barcelona (UB)

Career Start Year 2010

Number of shared co-authors 7

Sebastian M Waszak

University of California san francisco

Career Start Year 2010

Number of shared co-authors 1

Noah Spies

Stanford University

Career Start Year 2008

Number of shared co-authors 3

Jeroen de Ridder

Center for Molecular Medicine, University Medical Center Utrecht

Career Start Year 2006

Number of shared co-authors 0

Yongjun Zhao

Canada British Columbia Cancer Research Centre, University of British Columbia

Career Start Year 2005

Number of shared co-authors 25

Praveen F Cherukuri

Sanford School of Medicine, University of South Dakota

Career Start Year 2005

Number of shared co-authors 1

Chip Stewart

Broad Institute of MIT and Harvard

Career Start Year 2004

Number of shared co-authors 12

Peter Van Loo

The Francis Crick Institute

Career Start Year 2003

Number of shared co-authors 4

Benjamin J Raphael

Princeton University

Career Start Year 2003

Number of shared co-authors 30

Manolis Kellis

Massachusetts Institute of Technology

Career Start Year 2003

Number of shared co-authors 11

Yufeng Shen

Columbia University

Career Start Year 2002

Number of shared co-authors 4

Olivier Elemento

Meyer Cancer Center

Career Start Year 2002

Number of shared co-authors 12

Peter J Park

Harvard Medical School

Career Start Year 2001

Number of shared co-authors 9

Brent S Pedersen

Center for Molecular Medicine, University Medical Center Utrecht

Career Start Year 2001

Number of shared co-authors 0

Jan O Korbel

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2001

Number of shared co-authors 10

Suleyman Cenk Sahinalp

National Cancer Institute, National Institutes of Health

Career Start Year 2001

Number of shared co-authors 7

Saurabh Asthana

University of California San Francisco

Career Start Year 2000

Number of shared co-authors 7

Nancy F Hansen

National Human Genome Research Institute, National Institutes of Health

Career Start Year 2000

Number of shared co-authors 8

Michael N Edmonson

St. Jude Children's Research Hospital

Career Start Year 1999

Number of shared co-authors 6

Vineet Bafna

University of California San Diego

Career Start Year 1998

Number of shared co-authors 2

Sarah J Wheelan

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1998

Number of shared co-authors 2

Jay Shendure

University of Washington

Career Start Year 1996

Number of shared co-authors 12

Marco A Marra

University of British Columbia

Career Start Year 1993

Number of shared co-authors 38

Jinghui Zhang

Changhai Hospital, Second Military Medical University

Career Start Year 1992

Number of shared co-authors 27

Jean-Pierre A Kocher

Mayo Clinic

Career Start Year 1991

Number of shared co-authors 0

James C Mullikin

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1985

Number of shared co-authors 14

David A Wheeler

Baylor College of Medicine

Career Start Year 1984

Number of shared co-authors 23

Kelly A Frazer

University of California, USA Institute for Genomic Medicine

Career Start Year 1967

Number of shared co-authors 4

row(s) 1 - 30 of 30

Obi L Griffith

Washington University

Co-authored papers 9

Malachi Griffith

Washington University

Co-authored papers 9

Zachary L Skidmore

Washington University in St. Louis School of Medicine

Co-authored papers 8

Elaine R Mardis

The Ohio State University

Co-authored papers 8

Jason Walker

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 5

Donald F Conrad

Co-authored papers 5

Richard K Wilson

The Ohio State University

Co-authored papers 5

David E Larson

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 5

Christopher A Maher

Washington University in St Louis

Co-authored papers 5

Kilannin Krysiak

Washington University School of Medicine

Co-authored papers 5

Nicholas C Spies

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 4

Joshua F McMichael

Washington University

Co-authored papers 4

Vincent Magrini

The Ohio State University

Co-authored papers 4

Lee Trani

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 4

James M Eldred

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 4

Benjamin J Ainscough

McDonnell Genome Institute, Washington University in St Louis School of Medicine

Co-authored papers 4

Ni Huang

Washington University School of Medicine

Co-authored papers 3

Christopher A Miller

Washington University School of Medicine

Co-authored papers 3

Jason Kunisaki

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 3

Robert S Fulton

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 3

Alex H Wagner

Iowa State University, Mayo Clinic, Nationwide Children's Hospital, The Ohio State University College of Medicine, University of Iowa, Washington University in Saint Louis

Co-authored papers 3

Barak A Cohen

Co-authored papers 3

Sean McGrath

Harvard T.H. Chan School of Public Health

Co-authored papers 3

Michiel J Noordam

Co-authored papers 3

Katie M Campbell

McDonnell Genome Institute, Washington University School of Medicine

Co-authored papers 3

Matthew E Hurles