Author details

Full Name

Hyoung-Joo Lee

Affiliation

Yonsei University

ORCID

Career Start Year

2005

Papers

H Index

Expertise

CM4AI Collaborator

Trey Ideker (CM4AI)

PMID	Paper Title	Journal Title	Published Year
31199680	Liver disease-associated keratin 8 and 18 mutations modulate keratin acetylation and methylation.	FASEB J	2019
28965411	Next Generation Proteomic Pipeline for Chromosome-Based Proteomic Research Using NeXtProt and GENCODE Databases.	J Proteome Res	2017
28299940	Epsilon-Q: An Automated Analyzer Interface for Mass Spectral Library Search and Label-Free Protein Quantification.	J Proteome Res	2017
26751275	Quantitative Profiling Identifies Potential Regulatory Proteins Involved in Development from Dauer Stage to L4 Stage in Caenorhabditis elegans.	J Proteome Res	2016
26631510	Quantitative Profiling of Protein Tyrosine Kinases in Human Cancer Cell Lines by Multiplexed Parallel Reaction Monitoring Assays.	Mol Cell Proteomics	2016
27537616	Integrated Proteomic Pipeline Using Multiple Search Engines for a Proteogenomic Study with a Controlled Protein False Discovery Rate.	J Proteome Res	2016
27573070	gFinder: A Web-Based Bioinformatics Tool for the Analysis of N-Glycopeptides.	J Proteome Res	2016
27255222	Efficient Microscale Basic Reverse Phase Peptide Fractionation for Global and Targeted Proteomics.	J Proteome Res	2016
26148796	Distinct Protein Expression Profiles of Solid-Pseudopapillary Neoplasms of the Pancreas.	J Proteome Res	2015
26330117	Combination of Multiple Spectral Libraries Improves the Current Search Methods Used to Identify Missing Proteins in the Chromosome-Centric Human Proteome Project.	J Proteome Res	2015
26435392	Integrated Proteomic and Genomic Analysis of Gastric Cancer Patient Tissues.	J Proteome Res	2015
26267337	Comparative Study for Efficacy and Safety of Adenoidectomy according to the Surgical Method: A Prospective Multicenter Study.	PLoS One	2015
26549206	Chromosome-Based Proteomic Study for Identifying Novel Protein Variants from Human Hippocampal Tissue Using Customized neXtProt and GENCODE Databases.	J Proteome Res	2015
24274035	Proteogenomic analysis of human chromosome 9-encoded genes from human samples and lung cancer tissues.	J Proteome Res	2014
24628331	Abundance-ratio-based semiquantitative analysis of site-specific N-linked glycopeptides present in the plasma of hepatocellular carcinoma patients.	J Proteome Res	2014
23362793	Comprehensive genome-wide proteomic analysis of human placental tissue for the Chromosome-Centric Human Proteome Project.	J Proteome Res	2013
23255046	NSBP-1 mediates the effects of cholesterol on insulin/IGF-1 signaling in Caenorhabditis elegans.	Cell Mol Life Sci	2013
23252913	GenomewidePDB, a proteomic database exploring the comprehensive protein parts list and transcriptome landscape in human chromosomes.	J Proteome Res	2013
23286719	Chromosome 11-centric human proteome analysis of human brain hippocampus tissue.	J Proteome Res	2013
22398612	The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome.	Nat Biotechnol	2012
22723866	Quantitative proteomic analysis of human embryonic stem cell differentiation by 8-plex iTRAQ labelling.	PLoS One	2012
22824781	Enhanced delivery of T cells to tumor after chemotherapy using membrane-anchored, apoptosis-targeted peptide.	J Control Release	2012
22443261	Standard guidelines for the chromosome-centric human proteome project.	J Proteome Res	2012
20659929	Prediction of feather damage in laying hens using optical flows and Markov models.	J R Soc Interface	2011
22034872	Enhanced peptide quantification using spectral count clustering and cluster abundance.	BMC Bioinformatics	2011
21940909	Targeted mass spectrometric approach for biomarker discovery and validation with nonglycosylated tryptic peptides from N-linked glycoproteins in human plasma.	Mol Cell Proteomics	2011
21389045	Contribution of sams-1 and pmt-1 to lipid homoeostasis in adult Caenorhabditis elegans.	J Biochem	2011
21500349	A new versatile peptide-based size exclusion chromatography platform for global profiling and quantitation of candidate biomarkers in hepatocellular carcinoma specimens.	Proteomics	2011
19899825	Simple method for quantitative analysis of N-linked glycoproteins in hepatocellular carcinoma specimens.	J Proteome Res	2010
20521991	Anti-Inflammatory activity of Angelica keiskei through suppression of mitogen-activated protein kinases and nuclear factor-kappaB activation pathways.	J Med Food	2010
20175082	Data management and functional annotation of the Korean reference plasma proteome.	Proteomics	2010
19562805	Quantitative analysis of phosphopeptides in search of the disease biomarker from the hepatocellular carcinoma specimen.	Proteomics	2009
19658107	Human plasma carboxylesterase 1, a novel serologic biomarker candidate for hepatocellular carcinoma.	Proteomics	2009
19639590	BiomarkerDigger: a versatile disease proteome database and analysis platform for the identification of plasma cancer biomarkers.	Proteomics	2009
18187311	Supporting diagnosis of attention-deficit hyperactive disorder with novelty detection.	Artif Intell Med	2008
19003859	IntelliMS: a platform to efficiently manage and visualize tandem mass spectral data.	Proteomics	2008
18528841	Establishment of a PF2D-MS/MS platform for rapid profiling and semiquantitative analysis of membrane protein biomarkers.	Proteomics	2008
18651672	Application of a peptide-based PF2D platform for quantitative proteomics in disease biomarker discovery.	Proteomics	2008
18259167	Human Proteinpedia enables sharing of human protein data.	Nat Biotechnol	2008
18287768	Protein profiling of human plasma samples by two-dimensional electrophoresis.	Methods Mol Biol	2008
16404720	Proteomic analysis of mammalian basic proteins by liquid-based two-dimensional column chromatography.	Proteomics	2006
16418010	Biomarker discovery from the plasma proteome using multidimensional fractionation proteomics.	Curr Opin Chem Biol	2006
16047310	Efficient prefractionation of low-abundance proteins in human plasma and construction of a two-dimensional map.	Proteomics	2005

1 - 43 of 43

Vladimir Ignatchenko

Margaret Cancer Center

Career Start Year 2009

Number of shared co-authors 1

Yansheng Liu

Yale University School of Medicine

Career Start Year 2008

Number of shared co-authors 3

Paolo Nanni

Functional Genomics Center Zurich (FGCZ)-University of Zurich/ETH Zurich

Career Start Year 2007

Number of shared co-authors 1

Athena A Schepmoes

Pacific Northwest National Laboratory

Career Start Year 2006

Number of shared co-authors 2

Therese R W Clauss

Pacific Northwest National Laboratory

Career Start Year 2005

Number of shared co-authors 3

Alex Ignatchenko

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 2005

Number of shared co-authors 2

Sanjeeva Srivastava

Indian Institute of Technology Bombay

Career Start Year 2004

Number of shared co-authors 15

Brian L Hood

The Henry M. Jackson Foundation for the Advancement of Military Medicine

Career Start Year 2004

Number of shared co-authors 2

Matthew E Monroe

Pacific Northwest National Laboratory

Career Start Year 2004

Number of shared co-authors 9

Yassene Mohammed

Center for Proteomics and Metabolomics, Leiden University Medical Center

Career Start Year 2003

Number of shared co-authors 16

Jon M Jacobs

Pacific Northwest National Laboratory

Career Start Year 2003

Number of shared co-authors 2

Sharon J Pitteri

Stanford University

Career Start Year 2003

Number of shared co-authors 15

Siqi Liu

The Second Hospital, Jilin University

Career Start Year 2002

Number of shared co-authors 21

Kai St??hler

Universitatsklinikum

Career Start Year 2002

Number of shared co-authors 2

Melinda Rezeli

Clinical Protein Science & Imaging, Biomedical Centre, Lund University

Career Start Year 2002

Number of shared co-authors 14

Hanno Steen

Boston Children's Hospital, USA Harvard Medical School, Harvard Medical School

Career Start Year 2000

Number of shared co-authors 5

Marina A Gritsenko

Pacific Northwest National Laboratory

Career Start Year 2000

Number of shared co-authors 3

Emily S Boja

Office of Cancer Clinical Proteomics Research, National Cancer Institute

Career Start Year 2000

Number of shared co-authors 15

Tao Liu

Pacific Northwest National Laboratory

Career Start Year 1998

Number of shared co-authors 8

Thomas P Conrads

Women's Health Integrated Research Center, Inova Health System

Career Start Year 1998

Number of shared co-authors 5

Janne Lehti??

Karolinska Institutet

Career Start Year 1997

Number of shared co-authors 3

Thomas Kislinger

Princess Margaret Cancer Centre, University Health Network, University of Toronto

Career Start Year 1997

Number of shared co-authors 3

Nathan A Yates

University of Pittsburgh School of Medicine

Career Start Year 1996

Number of shared co-authors 10

Martin R Larsen

University of Southern Denmark

Career Start Year 1995

Number of shared co-authors 10

Si Wu

The Fourth Hospital of Hebei Medical University

Career Start Year 1995

Number of shared co-authors 2

Christoph H Borchers

McGill University

Career Start Year 1994

Number of shared co-authors 27

Yasushi Ishihama

Graduate School of Pharmaceutical Sciences, Kyoto University

Career Start Year 1994

Number of shared co-authors 5

Yu-Ju Chen

Institute of Chemistry

Career Start Year 1992

Number of shared co-authors 18

Timothy J Griffin

University of Minnesota

Career Start Year 1985

Number of shared co-authors 7

Steven A Carr

Broad Institute of MIT and Harvard

Career Start Year 1980

Number of shared co-authors 14

row(s) 1 - 30 of 30

Young-Ki Paik

College of Life Sciences and Biotechnology, Yonsei University

Co-authored papers 37

Seul-Ki Jeong

Seul-Ki Jeong Neurology Clinic

Co-authored papers 15

Hoguen Kim

Korea Advanced Institute of Science and Technology (KAIST)

Co-authored papers 13

Jong Shin Yoo

Co-authored papers 13

William S Hancock

Northeastern University

Co-authored papers 11

Sang Yun Cho

Co-authored papers 10

Min-Seok Kwon

Co-authored papers 9

Gilbert S Omenn

and School of Public Health, University of Michigan ann arbor

Co-authored papers 5

Samir M Hanash

University of Texas MD Anderson Cancer Center

Co-authored papers 4

John R Yates

TheScripps Research Institute

Co-authored papers 4

Jong-Sun Lim

Yonsei Proteome Research Center, Yonsei University

Co-authored papers 4

Mathias Uhl??n

KTH Royal Institute of Technology

Co-authored papers 3

Ruedi Aebersold

Institute of Molecular Systems Biology, ETH Zurich

Co-authored papers 3

Gy??rgy Marko-Varga

Clinical Protein Science & Imaging, Biomedical Centre, Lund University

Co-authored papers 2

Tao Xu

Co-authored papers 2

Eric W Deutsch

Institute for Systems Biology

Co-authored papers 2

Ghasem Hosseini Salekdeh

Macquarie University

Co-authored papers 2

Michael Snyder

Stanford University

Co-authored papers 2

Fuchu He

International Academy of Phronesis Medicine

Co-authored papers 2

Denis F Hochstrasser

Co-authored papers 2

Fangfei Yan

Beijing Mental Health Care Institute

Co-authored papers 2

Akhilesh Pandey

Co-authored papers 2

Taesung Park

Co-authored papers 2

Daniel C Liebler

Co-authored papers 2

Amos Bairoch

University of Geneva

Co-authored papers 2

Pierre Legrain

Co-authored papers 2

Mark S Baker

Macquarie University

Co-authored papers 2

Winston Hide

Harvard Medical School

Co-authored papers 1

Robert J Cotter

Co-authored papers 1

Lennart Martens

Co-authored papers 1

1 - 30

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