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Author Details

Alvis Brazma
European Bioinformatics Institute
1996
163
62
PMIDPaper TitleJournal TitlePublished Year
37992296Expression Atlas update: insights from sequencing data at both bulk and single cell level.Nucleic Acids Res2024
37992296Expression Atlas update: insights from sequencing data at both bulk and single cell level.Nucleic Acids Res2024
36815791Application of Genomic Sequencing to Refine Patient Stratification for Adjuvant Therapy in Renal Cell Carcinoma.Clin Cancer Res2023
37756700Simulating structurally variable nuclear pore complexes for microscopy.Bioinformatics2023
38020918Canonical Wnt and TGF-β/BMP signaling enhance melanocyte regeneration but suppress invasiveness, migration, and proliferation of melanoma cells.Front Cell Dev Biol2023
37838716Benchmarking strategies for cross-species integration of single-cell RNA sequencing data.Nat Commun2023
36815791Application of Genomic Sequencing to Refine Patient Stratification for Adjuvant Therapy in Renal Cell Carcinoma.Clin Cancer Res2023
36697831Author Correction: Genomic basis for RNA alterations in cancer.Nature2023
38020918Canonical Wnt and TGF-β/BMP signaling enhance melanocyte regeneration but suppress invasiveness, migration, and proliferation of melanoma cells.Front Cell Dev Biol2023
37756700Simulating structurally variable nuclear pore complexes for microscopy.Bioinformatics2023
37838716Benchmarking strategies for cross-species integration of single-cell RNA sequencing data.Nat Commun2023
36697831Author Correction: Genomic basis for RNA alterations in cancer.Nature2023
34723319The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences.Nucleic Acids Res2022
35581257Author Correction: Tumour gene expression signature in primary melanoma predicts long-term outcomes.Nat Commun2022
36481652Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations.Nat Commun2022
35046942Single-Cell Analysis Reveals the Immune Characteristics of Myeloid Cells and Memory T Cells in Recovered COVID-19 Patients With Different Severities.Front Immunol2022
34850121Expression Atlas update: gene and protein expression in multiple species.Nucleic Acids Res2022
34723319The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences.Nucleic Acids Res2022
35189131The BioImage Archive - Building a Home for Life-Sciences Microscopy Data.J Mol Biol2022
35223842Brain Regeneration Resembles Brain Cancer at Its Early Wound Healing Stage and Diverges From Cancer Later at Its Proliferation and Differentiation Stages.Front Cell Dev Biol2022
35581257Author Correction: Tumour gene expression signature in primary melanoma predicts long-term outcomes.Nat Commun2022
36481652Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations.Nat Commun2022
35046942Single-Cell Analysis Reveals the Immune Characteristics of Myeloid Cells and Memory T Cells in Recovered COVID-19 Patients With Different Severities.Front Immunol2022
35223842Brain Regeneration Resembles Brain Cancer at Its Early Wound Healing Stage and Diverges From Cancer Later at Its Proliferation and Differentiation Stages.Front Cell Dev Biol2022
35189131The BioImage Archive - Building a Home for Life-Sciences Microscopy Data.J Mol Biol2022
34850121Expression Atlas update: gene and protein expression in multiple species.Nucleic Acids Res2022
33211879From ArrayExpress to BioStudies.Nucleic Acids Res2021
33893311An integrated landscape of protein expression in human cancer.Sci Data2021
33782609User-friendly, scalable tools and workflows for single-cell RNA-seq analysis.Nat Methods2021
33602918Tumour gene expression signature in primary melanoma predicts long-term outcomes.Nat Commun2021
34021280REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology.Nat Methods2021
33211879From ArrayExpress to BioStudies.Nucleic Acids Res2021
34675242Meta-analysis of COVID-19 single-cell studies confirms eight key immune responses.Sci Rep2021
34615866A proteomics sample metadata representation for multiomics integration and big data analysis.Nat Commun2021
33602918Tumour gene expression signature in primary melanoma predicts long-term outcomes.Nat Commun2021
33782609User-friendly, scalable tools and workflows for single-cell RNA-seq analysis.Nat Methods2021
33893311An integrated landscape of protein expression in human cancer.Sci Data2021
34675242Meta-analysis of COVID-19 single-cell studies confirms eight key immune responses.Sci Rep2021
34615866A proteomics sample metadata representation for multiomics integration and big data analysis.Nat Commun2021
34021280REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology.Nat Methods2021
32424270Putative cell type discovery from single-cell gene expression data.Nat Methods2020
32424270Putative cell type discovery from single-cell gene expression data.Nat Methods2020
31665515Expression Atlas update: from tissues to single cells.Nucleic Acids Res2020
32390008Dysregulation at multiple points of the kynurenine pathway is a ubiquitous feature of renal cancer: implications for tumour immune evasion.Br J Cancer2020
32937025Using Deep Learning to Extrapolate Protein Expression Measurements.Proteomics2020
33303834Urinary metabolic phenotyping for Alzheimer's disease.Sci Rep2020
33188371Guidelines for reporting single-cell RNA-seq experiments.Nat Biotechnol2020
33057217Transparency and reproducibility in artificial intelligence.Nature2020
32781641Gastric Microbiome Diversities in Gastric Cancer Patients from Europe and Asia Mimic the Human Population Structure and Are Partly Driven by Microbiome Quantitative Trait Loci.Microorganisms2020
31665515Expression Atlas update: from tissues to single cells.Nucleic Acids Res2020
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Jason R Swedlow
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Mar Gonz??lez-Porta
Illumina Cambridge Ltd
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Silvie Fexova
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Y Amy Tang
Northeastern University
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Emma Hastings
European Bioinformatics Institute
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Frank C P Holstege
Princess Maxima Center for Pediatric Oncology
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Maria Krestyaninova
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Laura Huerta
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Release 1.2