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Author Details

Arkarachai Fungtammasan
DNAnexus Inc.
2012
16
11
PMIDPaper TitleJournal TitlePublished Year
36662619A chromosome-level reference genome and pangenome for barn swallow population genomics.Cell Rep2023
37612512The complete sequence of a human Y chromosome.Nature2023
36662619A chromosome-level reference genome and pangenome for barn swallow population genomics.Cell Rep2023
37612512The complete sequence of a human Y chromosome.Nature2023
35143491Ten simple rules for large-scale data processing.PLoS Comput Biol2022
35361931Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies.Nat Methods2022
35143491Ten simple rules for large-scale data processing.PLoS Comput Biol2022
35132260Curated variation benchmarks for challenging medically relevant autosomal genes.Nat Biotechnol2022
35361931Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies.Nat Methods2022
35132260Curated variation benchmarks for challenging medically relevant autosomal genes.Nat Biotechnol2022
33089966Reference genome and demographic history of the most endangered marine mammal, the vaquita.Mol Ecol Resour2021
33911273Towards complete and error-free genome assemblies of all vertebrate species.Nature2021
34097816Hi-C scaffolded short- and long-read genome assemblies of the California sea lion are broadly consistent for syntenic inference across 45 million years of evolution.Mol Ecol Resour2021
33712587Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.Nat Commun2021
33089966Reference genome and demographic history of the most endangered marine mammal, the vaquita.Mol Ecol Resour2021
33288905Chromosome-scale, haplotype-resolved assembly of human genomes.Nat Biotechnol2021
33911273Towards complete and error-free genome assemblies of all vertebrate species.Nature2021
33712587Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.Nat Commun2021
34097816Hi-C scaffolded short- and long-read genome assemblies of the California sea lion are broadly consistent for syntenic inference across 45 million years of evolution.Mol Ecol Resour2021
33288905Chromosome-scale, haplotype-resolved assembly of human genomes.Nat Biotechnol2021
32385271Effect of sequence depth and length in long-read assembly of the maize inbred NC358.Nat Commun2020
32385271Effect of sequence depth and length in long-read assembly of the maize inbred NC358.Nat Commun2020
31406327Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.Nat Biotechnol2019
31406327Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.Nat Biotechnol2019
27413049Reverse Transcription Errors and RNA-DNA Differences at Short Tandem Repeats.Mol Biol Evol2016
27413049Reverse Transcription Errors and RNA-DNA Differences at Short Tandem Repeats.Mol Biol Evol2016
27698254Corrigendum: A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?Genome Res2016
27698254Corrigendum: A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?Genome Res2016
25823460Accurate typing of short tandem repeats from genome-wide sequencing data and its applications.Genome Res2015
25823460Accurate typing of short tandem repeats from genome-wide sequencing data and its applications.Genome Res2015
22456607A genome-wide analysis of common fragile sites: what features determine chromosomal instability in the human genome?Genome Res2012
22456607A genome-wide analysis of common fragile sites: what features determine chromosomal instability in the human genome?Genome Res2012
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Collaborators

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Johns Hopkins University
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Center for Digital Medicine, Heinrich Heine University Dusseldorf
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UC Santa Cruz Genomics Institute, University of California
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National Institute of Standards and Technology
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