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Author Details

Simona Panni
Universita della Calabria
1999
35
19
Dexter Pratt (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37819683The landscape of microRNA interaction annotation: analysis of three rare disorders as a case study.Database (Oxford)2023
34761267The IntAct database: efficient access to fine-grained molecular interaction data.Nucleic Acids Res2022
32637990The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST).Bioinformatics2021
31493559Non-coding RNA regulatory networks.Biochim Biophys Acta Gene Regul Mech2020
33206959The IMEx coronavirus interactome: an evolving map of Coronaviridae-host molecular interactions.Database (Oxford)2020
33262342Towards a unified open access dataset of molecular interactions.Nat Commun2020
32587962The IMEx Coronavirus interactome: an evolving map of Coronaviridae-Host molecular interactions.bioRxiv2020
31194995Phospho-peptide binding domains in S. cerevisiae model organism.Biochimie2019
29642841Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions.BMC Bioinformatics2018
27873207Profiling Phosphopeptide-Binding Domain Recognition Specificity Using Peptide Microarrays.Methods Mol Biol2017
28701522The yeast noncoding RNA interaction network.RNA2017
27611305A subset of RAB proteins modulates PP2A phosphatase activity.Sci Rep2016
24300112Searching for repetitions in biological networks: methods, resources and tools.Brief Bioinform2015
25261582The adapter protein CD2AP binds to p53 protein in the cytoplasm and can discriminate its polymorphic variants P72R.J Biochem2015
25195858RNF11 is a GGA protein cargo and acts as a molecular adaptor for GGA3 ubiquitination mediated by Itch.Oncogene2015
24603559Specificity of ε and non-ε isoforms of arabidopsis 14-3-3 proteins towards the H+-ATPase and other targets.PLoS One2014
25052780Transport mechanism and regulatory properties of the human amino acid transporter ASCT2 (SLC1A5).Amino Acids2014
24847354Combining affinity proteomics and network context to identify new phosphatase substrates and adapters in growth pathways.Front Genet2014
22804825HuPho: the human phosphatase portal.FEBS J2013
21182200Combining peptide recognition specificity and context information for the prediction of the 14-3-3-mediated interactome in S. cerevisiae and H. sapiens.Proteomics2011
21321368Asymmetric comparison and querying of biological networks.IEEE/ACM Trans Comput Biol Bioinform2011
20676133Multiple modification and protein interaction signals drive the Ring finger protein 11 (RNF11) E3 ligase to the endosomal compartment.Oncogene2010
18974184VirusMINT: a viral protein interaction database.Nucleic Acids Res2009
19841731Bayesian modeling of the yeast SH3 domain interactome predicts spatiotemporal dynamics of endocytosis proteins.PLoS Biol2009
20052906A technique to search for functional similarities in protein-protein interaction networks.Int J Data Min Bioinform2009
17916074Role of 14-3-3 proteins in the regulation of neutral trehalase in the yeast Saccharomyces cerevisiae.FEMS Yeast Res2008
18154663Binding to DPF-motif by the POB1 EH domain is responsible for POB1-Eps15 interaction.BMC Biochem2007
15165896Selectivity and promiscuity in the interaction network mediated by protein recognition modules.FEBS Lett2004
14737190Protein interaction networks by proteome peptide scanning.PLoS Biol2004
11929862In vitro evolution of recognition specificity mediated by SH3 domains reveals target recognition rules.J Biol Chem2002
11983234Mapping the C terminal epitope of the Alzheimer's disease specific antibody MN423.J Immunol Methods2002
11911878Can we infer peptide recognition specificity mediated by SH3 domains?FEBS Lett2002
11281829Alternative bacteriophage display systems.Comb Chem High Throughput Screen2001
10967328Domain repertoires as a tool to derive protein recognition rules.FEBS Lett2000
10508163A novel peptide-SH3 interaction.EMBO J1999
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Collaborators

Gianni Cesareni
University of Rome 'Tor Vergata'
Co-authored papers 24
Pablo Porras
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 8
Livia Perfetto
Department of Biology and Biotechnologies "Charles Darwin", La Sapienza University
Co-authored papers 7
Henning Hermjakob
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 7
Sandra Orchard
EMBL's European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 7
Luana Licata
University of Tor Vergata
Co-authored papers 7
Noemi Del-Toro
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 6
Margaret Duesbury
Co-authored papers 5
Sylvie Ricard-Blum
ICBMS UMR CNRS 5246, University Lyon 1
Co-authored papers 5
Lukasz Salwinski
university of california los angeles
Co-authored papers 4
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University College London, Institute for Cardiovascular Science
Co-authored papers 4
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Schroeder Arthritis Institute
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Co-authored papers 3
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Schroeder Arthritis Institute
Co-authored papers 3
Colin Combe
University of Edinburgh
Co-authored papers 2
Marc Vidal
Blavatnik Institute, Harvard Medical School
Co-authored papers 2
Arnaud Ceol
European Institute of Oncology IRCCS
Co-authored papers 2
David J Lynn
South Australian Health and Medical Research Institute
Co-authored papers 2
Glyn Bradley
Co-authored papers 2
David G Drubin
University of California berkeley
Co-authored papers 1
Charles Boone
University of Toronto
Co-authored papers 1
Dexter Pratt (CM4AI)
UC San Diego
Co-authored papers 1
Steven Vercruysse
Norwegian University of Science and Technology (NTNU)
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Vasundra Tour??
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Javier De Las Rivas
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Release 1.2