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Author Details

Jennifer Fostel
National Institute of Environmental Health Sciences
1980
67
33
PMIDPaper TitleJournal TitlePublished Year
36909352ToxicR: A computational platform in R for computational toxicology and dose-response analyses.Comput Toxicol2023
36909352ToxicR: A computational platform in R for computational toxicology and dose-response analyses.Comput Toxicol2023
34751388CEBS update: curated toxicology database with enhanced tools for data integration.Nucleic Acids Res2022
34751388CEBS update: curated toxicology database with enhanced tools for data integration.Nucleic Acids Res2022
27899660CEBS: a comprehensive annotated database of toxicological data.Nucleic Acids Res2017
28766826The TGx-28.65 biomarker online application for analysis of transcriptomics data to identify DNA damage-inducing chemicals in human cell cultures.Environ Mol Mutagen2017
27899660CEBS: a comprehensive annotated database of toxicological data.Nucleic Acids Res2017
28766826The TGx-28.65 biomarker online application for analysis of transcriptomics data to identify DNA damage-inducing chemicals in human cell cultures.Environ Mol Mutagen2017
27128319The Ontology for Biomedical Investigations.PLoS One2016
27128319The Ontology for Biomedical Investigations.PLoS One2016
26232693NIEHS/FDA CLARITY-BPA research program update.Reprod Toxicol2015
26232693NIEHS/FDA CLARITY-BPA research program update.Reprod Toxicol2015
26361796Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues.Toxicol Sci2015
26361796Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues.Toxicol Sci2015
24836576Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine.Nat Med2014
25012808Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway.Sci Rep2014
24836576Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine.Nat Med2014
25012808Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway.Sci Rep2014
23303777Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation.Nucleic Acids Res2013
23303777Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation.Nucleic Acids Res2013
23664763Transcriptional and epigenetic dynamics during specification of human embryonic stem cells.Cell2013
23664763Transcriptional and epigenetic dynamics during specification of human embryonic stem cells.Cell2013
22400915Targeted deletion of nrf2 impairs lung development and oxidant injury in neonatal mice.Antioxid Redox Signal2012
22400915Targeted deletion of nrf2 impairs lung development and oxidant injury in neonatal mice.Antioxid Redox Signal2012
23034176Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA methylation profiling.Genome Biol2012
22230429Sources of variance in baseline gene expression in the rodent liver.Mutat Res2012
23034176Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA methylation profiling.Genome Biol2012
22230429Sources of variance in baseline gene expression in the rodent liver.Mutat Res2012
22039513Targeted deletion of Nrf2 reduces urethane-induced lung tumor development in mice.PLoS One2011
22369133Maximizing biomarker discovery by minimizing gene signatures.BMC Genomics2011
22039513Targeted deletion of Nrf2 reduces urethane-induced lung tumor development in mice.PLoS One2011
22369133Maximizing biomarker discovery by minimizing gene signatures.BMC Genomics2011
20100679Current and future applications of toxicogenomics: Results summary of a survey from the HESI Genomics State of Science Subcommittee.Environ Health Perspect2010
21304730Meeting Report from the Second "Minimum Information for Biological and Biomedical Investigations" (MIBBI) workshop.Stand Genomic Sci2010
20935265Prolonged drug selection of breast cancer cells and enrichment of cancer stem cell characteristics.J Natl Cancer Inst2010
20826374Protective role of interleukin-10 in ozone-induced pulmonary inflammation.Environ Health Perspect2010
20676074The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models.Nat Biotechnol2010
20100679Current and future applications of toxicogenomics: Results summary of a survey from the HESI Genomics State of Science Subcommittee.Environ Health Perspect2010
20626927Modeling biomedical experimental processes with OBI.J Biomed Semantics2010
21304730Meeting Report from the Second "Minimum Information for Biological and Biomedical Investigations" (MIBBI) workshop.Stand Genomic Sci2010
20826374Protective role of interleukin-10 in ozone-induced pulmonary inflammation.Environ Health Perspect2010
20935265Prolonged drug selection of breast cancer cells and enrichment of cancer stem cell characteristics.J Natl Cancer Inst2010
20626927Modeling biomedical experimental processes with OBI.J Biomed Semantics2010
20676074The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models.Nat Biotechnol2010
19465456Characterization and interlaboratory comparison of a gene expression signature for differentiating genotoxic mechanisms.Toxicol Sci2009
19465456Characterization and interlaboratory comparison of a gene expression signature for differentiating genotoxic mechanisms.Toxicol Sci2009
19374479Creating a controlled vocabulary for the ethics of human research: towards a biomedical ethics ontology.J Empir Res Hum Res Ethics2009
19925653Transcriptomic analysis of pathways regulated by toll-like receptor 4 in a murine model of chronic pulmonary inflammation and carcinogenesis.Mol Cancer2009
19925653Transcriptomic analysis of pathways regulated by toll-like receptor 4 in a murine model of chronic pulmonary inflammation and carcinogenesis.Mol Cancer2009
19374479Creating a controlled vocabulary for the ethics of human research: towards a biomedical ethics ontology.J Empir Res Hum Res Ethics2009
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Collaborators

Philippe Rocca-Serra
University of Oxford
Co-authored papers 11
Susanna-Assunta Sansone
Oxford e-Research Centre, University of Oxford
Co-authored papers 11
Pierre R Bushel
Co-authored papers 9
Norman Morrison
European Bioinformatics Institute
Co-authored papers 9
Weida Tong
National Center for Toxicological Research
Co-authored papers 8
Chris F Taylor
European Molecular Biology Laboratory- European Bioinformatics Institute
Co-authored papers 7
Christian J Stoeckert
Perelman School of Medicine, University of Pennsylvania
Co-authored papers 6
Helen Parkinson
European Bioinformatics Institute
Co-authored papers 6
Ryan R Brinkman
University of British Columbia
Co-authored papers 5
Patricia L Whetzel
University of Colorado Anschutz Medical Campus
Co-authored papers 5
Liju Fan
Hebei General Hospital Shijiazhuang 050051 Hebei China.
Co-authored papers 5
Michael D Waters
Washington University School of Medicine
Co-authored papers 5
Dawn Field
Biodiversity Institute, University of Oxford
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Mervi Heiskanen
National Cancer Institute
Co-authored papers 4
Richard S Paules
Co-authored papers 4
Barry Smith
University at Buffalo
Co-authored papers 4
Gilberto Fragoso
NCI Center for Bioinformatics, National Cancer Institute
Co-authored papers 4
Daniel Schober
Institute of Forensic Medicine, University of Bern
Co-authored papers 3
Phillip Lord
Newcastle University
Co-authored papers 3
Alvis Brazma
European Bioinformatics Institute
Co-authored papers 3
Nigel Hardy
Co-authored papers 3
Eric S Lander
Vanderbilt-Ingram Cancer Center, Vanderbilt University
Co-authored papers 3
Nianqing Xiao
Co-authored papers 3
John Quackenbush
Harvard T. H. Chan School of Public Health
Co-authored papers 3
David J Dix
Co-authored papers 3
Tieliu Shi
Co-authored papers 2
Dirk Derom
The Vrije Universiteit Brussel
Co-authored papers 2
Richard H Scheuermann
J. Craig Venter Institute
Co-authored papers 2
Stefan Wiemann
Co-authored papers 2
Tina Hernandez-Boussard
Stanford University
Co-authored papers 2
Release 1.2