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Author Details

Carolyn J Lawrence
Iowa State University
2000
59
29
PMIDPaper TitleJournal TitlePublished Year
34980221The Agricultural Genome to Phenome Initiative (AG2PI): creating a shared vision across crop and livestock research communities.Genome Biol2022
35426911Standardized genome-wide function prediction enables comparative functional genomics: a new application area for Gene Ontologies in plants.Gigascience2022
35421080Ten simple rules to ruin a collaborative environment.PLoS Comput Biol2022
34034755Gene Ontology Meta Annotator for Plants (GOMAP).Plant Methods2021
33763106Utility of Climatic Information via Combining Ability Models to Improve Genomic Prediction for Yield Within the Genomes to Fields Maize Project.Front Genet2021
32122303GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations.BMC Genomics2020
31998331Automated Methods Enable Direct Computation on Phenotypic Descriptions for Novel Candidate Gene Prediction.Front Plant Sci2020
33343612Editorial: Phenotyping; From Plant, to Data, to Impact and Highlights of the International Plant Phenotyping Symposium - IPPS 2018.Front Plant Sci2020
33313544Computing on Phenotypic Descriptions for Candidate Gene Discovery and Crop Improvement.Plant Phenomics2020
31555312MaizeDIG: Maize Database of Images and Genomes.Front Plant Sci2019
31744902A high-resolution gene expression atlas links dedicated meristem genes to key architectural traits.Genome Res2019
31660060Assessing plant performance in the Enviratron.Plant Methods2019
31882637High-frequency random DNA insertions upon co-delivery of CRISPR-Cas9 ribonucleoprotein and selectable marker plasmid in rice.Sci Rep2019
29972722Activities and specificities of CRISPR/Cas9 and Cas12a nucleases for targeted mutagenesis in maize.Plant Biotechnol J2019
29561212Sowing the seeds of skepticism: Russian state news and anti-GMO sentiment.GM Crops Food2018
29802214Response to Persistent ER Stress in Plants: A Multiphasic Process That Transitions Cells from Prosurvival Activities to Cell Death.Plant Cell2018
29986751Maize Genomes to Fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets.BMC Res Notes2018
30059508Crowdsourcing image analysis for plant phenomics to generate ground truth data for machine learning.PLoS Comput Biol2018
31245718Maize GO Annotation-Methods, Evaluation, and Review (maize-GAMER).Plant Direct2018
29116144The effect of artificial selection on phenotypic plasticity in maize.Nat Commun2017
27482076The Quest for Understanding Phenotypic Variation via Integrated Approaches in the Field Environment.Plant Physiol2016
26432828MaizeGDB update: new tools, data and interface for the maize model organism database.Nucleic Acids Res2016
26519406MaizeGDB: The Maize Genetics and Genomics Database.Methods Mol Biol2016
27902801Achieving Plant CRISPR Targeting that Limits Off-Target Effects.Plant Genome2016
25384563Automated update, revision, and quality control of the maize genome annotations using MAKER-P improves the B73 RefGen_v3 gene models and identifies new genes.Plant Physiol2015
26745836A quick guide to CRISPR sgRNA design tools.GM Crops Food2015
26713234Emerging semantics to link phenotype and environment.PeerJ2015
25774204An ontology approach to comparative phenomics in plants.Plant Methods2015
25562316Finding our way through phenotypes.PLoS Biol2015
24306534MAKER-P: a tool kit for the rapid creation, management, and quality control of plant genome annotations.Plant Physiol2014
25527104G-quadruplex (G4) motifs in the maize (Zea mays L.) genome are enriched at specific locations in thousands of genes coupled to energy status, hypoxia, low sugar, and nutrient deprivation.J Genet Genomics2014
23223973Maize chromosomal knobs are located in gene-dense areas and suppress local recombination.Chromosoma2013
23451294RCN4GSC Workshop Report: Managing Data at the Interface of Biodiversity and (Meta)Genomics, March 2011.Stand Genomic Sci2012
21565781The MaizeGDB Genome Browser tutorial: one example of database outreach to biologists via video.Database (Oxford)2011
22253616POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data.Int J Plant Genomics2011
21558151Multi-source and ontology-based retrieval engine for maize mutant phenotypes.Database (Oxford)2011
21624896MaizeGDB: curation and outreach go hand-in-hand.Database (Oxford)2011
20150665BioExtract server--an integrated workflow-enabling system to access and analyze heterogeneous, distributed biomolecular data.IEEE/ACM Trans Comput Biol Bioinform2010
20627860Choosing a genome browser for a Model Organism Database: surveying the maize community.Database (Oxford)2010
20124413The Locus Lookup tool at MaizeGDB: identification of genomic regions in maize by integrating sequence information with physical and genetic maps.Bioinformatics2010
19207214High-throughput linkage analysis of Mutator insertion sites in maize.Plant J2009
21847242MaizeGDB becomes 'sequence-centric'.Database (Oxford)2009
19126689A recommendation for naming transcription factor proteins in the grasses.Plant Physiol2009
18063570PlantGDB: a resource for comparative plant genomics.Nucleic Acids Res2008
20054995Implementing bioinformatic workflows within the bioextract server.Int J Comput Biol Drug Des2008
18769488MaizeGDB: The maize model organism database for basic, translational, and applied research.Int J Plant Genomics2008
17202174MaizeGDB's new data types, resources and activities.Nucleic Acids Res2007
18287701MaizeGDB.Methods Mol Biol2007
17660357Translational genomics for bioenergy production from fuelstock grasses: maize as the model species.Plant Cell2007
16387866Predicting chromosomal locations of genetically mapped loci in maize using the Morgan2McClintock Translator.Genetics2006
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Collaborators

USDA-ARS, Corn Insects and Crop Genetics Research Unit
Co-authored papers 14
Corn Insects and Crop Genetics Research Unit, USDA Agricultural Research Service
Co-authored papers 12
University of Missouri
Co-authored papers 10
USDA, Crop Improvement Genetics Research Unit, Western Regional Research Center
Co-authored papers 8
USDA-ARS, Corn Insects and Crop Genetics Research Unit
Co-authored papers 7
Co-authored papers 6
Critical Path Institute
Co-authored papers 4
Oregon State University
Co-authored papers 3
Carnegie Institution for Science
Co-authored papers 3
USDA ARS NAA Robert W. Holley Center for Agriculture and Health
Co-authored papers 3
Oregon State University
Co-authored papers 3
Iowa State University
Co-authored papers 3
Co-authored papers 2
University of California irvine
Co-authored papers 2
Institut fur Evolutionsbiologie und Okologie, Universitat Bonn
Co-authored papers 2
University of South Dakota
Co-authored papers 2
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 2
Institute of Cancer and Genomic Sciences, University of Birmingham
Co-authored papers 2
Cornell University
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Uniformed Services University of the Health Sciences
Co-authored papers 2
University of Utah
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King's College London
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Lawrence Berkeley National Laboratory
Co-authored papers 2
University of Kansas
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Arizona State University
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Center for Genomics-Enabled Plant Science, Michigan State University
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Duke University
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Biodiversity Information Standards, Coastal and Estuarine Research Federation, Oregon State University, Phycological Society of America, Society of Professional Consultants, The Data Detektiv, University of Colorado Anschutz Medical Campus, University of Maryland College Park, Women in the Enterprise of Science and Technology
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The Pennsylvania State University, University Park
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University of Utah
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