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Author Details

William D Duncan
University of Florida
2013
18
8
PMIDPaper TitleJournal TitlePublished Year
36823605The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond.J Biomed Semantics2023
37609265MRIO: The Magnetic Resonance Imaging Acquisition and Analysis Ontology.bioRxiv2023
36823605The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond.J Biomed Semantics2023
37609265MRIO: The Magnetic Resonance Imaging Acquisition and Analysis Ontology.bioRxiv2023
36303775Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale.Front Bioinform2022
36303775Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale.Front Bioinform2022
36208225Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.Database (Oxford)2022
35616100A Simple Standard for Sharing Ontological Mappings (SSSOM).Database (Oxford)2022
37324543A community effort for COVID-19 Ontology Harmonization.CEUR Workshop Proc2022
35616100A Simple Standard for Sharing Ontological Mappings (SSSOM).Database (Oxford)2022
37324543A community effort for COVID-19 Ontology Harmonization.CEUR Workshop Proc2022
36208225Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.Database (Oxford)2022
33947809Correction for Vangay et al., "Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities".mSystems2021
33622857Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities.mSystems2021
33947809Correction for Vangay et al., "Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities".mSystems2021
34697637OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.Database (Oxford)2021
33622857Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities.mSystems2021
34697637OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.Database (Oxford)2021
32349142Leveraging Electronic Dental Record Data for Clinical Research in the National Dental PBRN Practices.Appl Clin Inform2020
32350400The National Microbiome Data Collaborative: enabling microbiome science.Nat Rev Microbiol2020
32349142Leveraging Electronic Dental Record Data for Clinical Research in the National Dental PBRN Practices.Appl Clin Inform2020
32819435Structuring, reuse and analysis of electronic dental data using the Oral Health and Disease Ontology.J Biomed Semantics2020
32819435Structuring, reuse and analysis of electronic dental data using the Oral Health and Disease Ontology.J Biomed Semantics2020
32350400The National Microbiome Data Collaborative: enabling microbiome science.Nat Rev Microbiol2020
31272372An ontology for representing hematologic malignancies: the cancer cell ontology.BMC Bioinformatics2019
31272389OSCI: standardized stem cell ontology representation and use cases for stem cell investigation.BMC Bioinformatics2019
31272372An ontology for representing hematologic malignancies: the cancer cell ontology.BMC Bioinformatics2019
31272389OSCI: standardized stem cell ontology representation and use cases for stem cell investigation.BMC Bioinformatics2019
27899649Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.Nucleic Acids Res2017
27899649Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.Nucleic Acids Res2017
27034769Representing vision and blindness.J Biomed Semantics2016
27034769Representing vision and blindness.J Biomed Semantics2016
24303273An ontology-based method for secondary use of electronic dental record data.AMIA Jt Summits Transl Sci Proc2013
24314207The neurological disease ontology.J Biomed Semantics2013
24303273An ontology-based method for secondary use of electronic dental record data.AMIA Jt Summits Transl Sci Proc2013
24314207The neurological disease ontology.J Biomed Semantics2013
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Collaborators

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 8
Jacobs School of Medicine and Biomedical Sciences, University at Buffalo
Co-authored papers 7
American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison
Co-authored papers 6
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Co-authored papers 6
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DOE Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 4
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 4
Lawrence Berkeley National Laboratory
Co-authored papers 4
Los Alamos National Laboratory
Co-authored papers 4
University of Pennsylvania Perelman School of Medicine
Co-authored papers 4
Critical Path Institute
Co-authored papers 4
Pacific Northwest National Laboratory
Co-authored papers 4
University of Maryland School of Medicine, Institute for Genome Sciences
Co-authored papers 3
Los Alamos National Laboratory
Co-authored papers 3
European Bioinformatics Institute
Co-authored papers 3
Knocean Inc.
Co-authored papers 3
Lawrence Berkeley National Laboratory
Co-authored papers 3
Lawrence Berkely National Laboratory, Massachusetts Institute of Technology, Princeton University
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DOE Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 3
Renaissance Computing Institute, University of North Carolina
Co-authored papers 3
University at Buffalo
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Regenstrief Institute
Co-authored papers 3
University of Minnesota
Co-authored papers 3
Indiana University Indianapolis
Co-authored papers 3
University of Colorado - Anschutz Medical Campus
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Oak Ridge National Laboratory
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Lawrence Berkeley National Laboratory
Co-authored papers 2
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
Reparto Universitario
Co-authored papers 2
DOE Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 2