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Author Details

Jayson Harshbarger
RIKEN Center for Integrative Medical Sciences
2014
17
13
PMIDPaper TitleJournal TitlePublished Year
33211864FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs.Nucleic Acids Res2021
30538238Author Correction: Transcription start site profiling of 15 anatomical regions of the Macaca mulatta central nervous system.Sci Data2018
28061742DEIVA: a web application for interactive visual analysis of differential gene expression profiles.BMC Genomics2017
28241135An atlas of human long non-coding RNAs with accurate 5' ends.Nature2017
29087374Transcription start site profiling of 15 anatomical regions of the Macaca mulatta central nervous system.Sci Data2017
29182598Monitoring transcription initiation activities in rat and dog.Sci Data2017
28829439An integrated expression atlas of miRNAs and their promoters in human and mouse.Nat Biotechnol2017
28850106FANTOM5 CAGE profiles of human and mouse samples.Sci Data2017
28850105FANTOM5 CAGE profiles of human and mouse reprocessed for GRCh38 and GRCm38 genome assemblies.Sci Data2017
27794045Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals.Nucleic Acids Res2017
26862012Corrigendum: A draft network of ligand-receptor-mediated multicellular signalling in human.Nat Commun2016
27402679FANTOM5 transcriptome catalog of cellular states based on Semantic MediaWiki.Database (Oxford)2016
25723102Gateways to the FANTOM5 promoter level mammalian expression atlas.Genome Biol2015
25897122The BioMart community portal: an innovative alternative to large, centralized data repositories.Nucleic Acids Res2015
25678556Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells.Science2015
24727769Interactive visualization and analysis of large-scale sequencing datasets using ZENBU.Nat Biotechnol2014
24670764A promoter-level mammalian expression atlas.Nature2014
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Collaborators

Hideya Kawaji
RIKEN Center for Integrative Medical Sciences
Co-authored papers 16
Marina Lizio
Cerevance Ltd
Co-authored papers 15
Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 14
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Co-authored papers 13
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 13
Takeya Kasukawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 13
Imad Abugessaisa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 12
Jessica Severin
Center for Integrative Medical Sciences
Co-authored papers 12
Akira Hasegawa
RIKEN Center for Integrative Medical Sciences
Co-authored papers 9
Masayoshi Itoh
RIKEN Center for Integrative Medical Sciences
Co-authored papers 9
Timo Lassmann
Telethon Kids Institute, University of Western Australia
Co-authored papers 9
Carsten O Daub
International Institute of Molecular and Cell Biology in Warsaw
Co-authored papers 8
Peter Heutink
German Center for Neurodegenerative Diseases (DZNE).
Co-authored papers 6
Erik Arner
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Co-authored papers 6
Dave S B Hoon
Saint John's Cancer Institute at Saint John's Health Center
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Nicolas Bertin
University Bordeaux, CNRS
Co-authored papers 6
Albin Sandelin
University of Copenhagen
Co-authored papers 5
Jordan A Ramilowski
Advanced Medical Research Center, Yokohama City University
Co-authored papers 5
Patrizia Rizzu
German Center for Neurodegenerative Diseases
Co-authored papers 5
Shoko Watanabe
The Jikei University School of Medicine
Co-authored papers 5
Mizuho Sakai
University of California berkeley
Co-authored papers 5
Fumi Hori
Center for Life Science Technologies, RIKEN Yokohama Institute
Co-authored papers 5
Atsushi Kondo
Tokyo University of Agriculture and Technology
Co-authored papers 5
Christopher J Mungall
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 5
Christine A Wells
The University of Melbourne
Co-authored papers 5
Serkan Sahin
RIKEN Center for Life Science Technologies
Co-authored papers 4
Andreas Lennartsson
Karolinska Institute
Co-authored papers 4
Dan Goldowitz
University of British Columbia
Co-authored papers 4
Michael Detmar
Institute of Pharmaceutical Sciences, ETH Zurich
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