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Author Details

Eoin Fahy
1990
62
36
PMIDPaper TitleJournal TitlePublished Year
37855672LIPID MAPS: update to databases and tools for the lipidomics community.Nucleic Acids Res2024
36543939Guiding the choice of informatics software and tools for lipidomics research applications.Nat Methods2023
34862502GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser.Nat Methods2022
37983749MetGENE: gene-centric metabolomics information retrieval tool.Gigascience2022
34455770ADAP-KDB: A Spectral Knowledgebase for Tracking and Prioritizing Unknown GC-MS Spectra in the NIH's Metabolomics Data Repository.Anal Chem2021
32990942Neurofibromatosis -1 diagnosed from an intraoral swelling - a case series.Australian Dental Journal2021
33027502LipidFinder 2.0: advanced informatics pipeline for lipidomics discovery applications.Bioinformatics2021
35190800Cloud-based archived metabolomics data: A resource for in-source fragmentation/annotation, meta-analysis and systems biology.Anal Sci Adv2020
33199890RefMet: a reference nomenclature for metabolomics.Nat Methods2020
33037133Update on LIPID MAPS classification, nomenclature, and shorthand notation for MS-derived lipid structures.J Lipid Res2020
31155658The Consortium of Metabolomics Studies (COMETS): Metabolomics in 47 Prospective Cohort Studies.Am J Epidemiol2019
30101336LipidFinder on LIPID MAPS: peak filtering, MS searching and statistical analysis for lipidomics.2019
28486464Discovering and linking public omics data sets using the Omics Discovery Index.Nat Biotechnol2017
27867422ClassyFire: automated chemical classification with a comprehensive, computable taxonomy.J Cheminform2016
26467476Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools.Nucleic Acids Res2016
25598080Biomarkers of NAFLD progression: a lipidomics approach to an epidemic.J Lipid Res2015
23420730An insulinoma presenting as hypoglycaemia associated with exercise stress testing.BMJ Case Reports2013
23776196Analysis of inflammatory and lipid metabolic networks across RAW264.7 and thioglycolate-elicited macrophages.J Lipid Res2013
24038259Lipidomics technologies at the end of the first decade and the beginning of the next.Advances in Nutrition2013
23981351A combined omics study on activated macrophages--enhanced role of STATs in apoptosis, immunity and lipid metabolism.Bioinformatics2013
2418906925-Hydroxycholesterol activates the integrated stress response to reprogram transcription and translation in macrophages.J Biol Chem2013
24764601LIPID MAPS-Nature Lipidomics Gateway: An Online Resource for Students and Educators Interested in Lipids.J Chem Educ2012
23006594Template-based combinatorial enumeration of virtual compound libraries for lipids.J Cheminform2012
23021221Regulated accumulation of desmosterol integrates macrophage lipid metabolism and inflammatory responses.Cell2012
21939287Bioinformatics and systems biology of the lipidome.Chem Rev2011
21704189Lipid classification, structures and tools.Biochim Biophys Acta2011
20671299Lipidomics reveals a remarkable diversity of lipids in human plasma.J Lipid Res2010
20923771A mouse macrophage lipidome.J Biol Chem2010
20574076Subcellular organelle lipidomics in TLR-4-activated macrophages.J Lipid Res2010
19884172Application of proteomic marker ensembles to subcellular organelle identification.Mol Cell Proteomics2010
20092991Isoprostane nomenclature: more suggestions.2010
19098281Update of the LIPID MAPS comprehensive classification system for lipids.J Lipid Res2009
17098933LMSD: LIPID MAPS structure database.Nucleic Acids Res2007
17954221Bioinformatics for lipidomics.Methods Enzymol2007
17954217The lipid maps initiative in lipidomics.Methods Enzymol2007
17584797LIPID MAPS online tools for lipid research.Nucleic Acids Res2007
17135246Arachidonate-derived dihomoprostaglandin production observed in endotoxin-stimulated macrophage-like cells.Journal of Biological Chemistry2007
15722563A comprehensive classification system for lipids.J Lipid Res2005
14681458MitoProteome: mitochondrial protein sequence database and annotation system.Nucleic Acids Res2004
15253431Expanded coverage of the human heart mitochondrial proteome using multidimensional liquid chromatography coupled with tandem mass spectrometry.J Proteome Res2004
15133837Identification of protein associations in organelles, using mass spectrometry-based proteomics.Mass Spectrometry Reviews2004
15037509MITOPRED: a genome-scale method for prediction of nucleus-encoded mitochondrial proteins.Bioinformatics2004
15215413MITOPRED: a web server for the prediction of mitochondrial proteins.Nucleic Acids Res2004
12592411Characterization of the human heart mitochondrial proteome.Nat Biotechnol2003
12573857Global organellar proteomics.Trends in Biotechnology2003
12679331Oxidative post-translational modification of tryptophan residues in cardiac mitochondrial proteins.Journal of Biological Chemistry2003
12611891The subunit composition of the human NADH dehydrogenase obtained by rapid one-step immunopurification.Journal of Biological Chemistry2003
12645917An alternative strategy to determine the mitochondrial proteome using sucrose gradient fractionation and 1D PAGE on highly purified human heart mitochondria.J Proteome Res2002
11938495Reduced-median-network analysis of complete mitochondrial DNA coding-region sequences for the major African, Asian, and European haplogroups.Am J Hum Genet2002
11041529Transmission of the human mitochondrial genome.Hum Reprod2000
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