Author details

Full Name

Goran Nenadic

Affiliation

ORCID

Career Start Year

2002

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
34879823	Correction to: Mining a stroke knowledge graph from literature.	BMC Bioinformatics	2021
33949962	Extracting Drug Names and Associated Attributes From Discharge Summaries: Text Mining Study.	JMIR Medical Informatics	2021
34325669	Mining a stroke knowledge graph from literature.	BMC Bioinformatics	2021
32713359	Real-world effectiveness, its predictors and onset of action of cholinesterase inhibitors and memantine in dementia: retrospective health record study.	British Journal of Psychiatry	2021
33341543	Corrigendum to "Extraction of temporal relations from clinical free text: A systematic review of current approaches" [J. Biomed. Inf. 108 (2020) 103488].	Journal of Biomedical Informatics	2021
34600144	Attention-based bidirectional long short-term memory networks for extracting temporal relationships from clinical discharge summaries.	Journal of Biomedical Informatics	2021
32673788	Extraction of temporal relations from clinical free text: A systematic review of current approaches.	Journal of Biomedical Informatics	2020
32229465	Clinical Text Data in Machine Learning: Systematic Review.	JMIR Medical Informatics	2020
32278044	Identification of herbal categories active in pain disorder subtypes by machine learning help reveal novel molecular mechanisms of algesia.	Pharmacological Research	2020
32213492	Patient discussions of glucocorticoid-related side effects within an online health community forum.	Ann Rheum Dis	2020
32457202	Should free-text data in electronic medical records be shared for research? A citizens' jury study in the UK.	Journal of Medical Ethics	2020
32597785	Toward the Development of Data Governance Standards for Using Clinical Free-Text Data in Health Research: Position Paper.	Journal of Medical Internet Research	2020
30951492	Correction: Automatic Extraction of Mental Health Disorders From Domestic Violence Police Narratives: Text Mining Study.	Journal of Medical Internet Research	2019
32025649	A rule-based approach to identify patient eligibility criteria for clinical trials from narrative longitudinal records.	JAMIA Open	2019
31711540	Exploring semantic deep learning for building reliable and reusable one health knowledge from PubMed systematic reviews and veterinary clinical notes.	J Biomed Semantics	2019
30860490	Automated Analysis of Domestic Violence Police Reports to Explore Abuse Types and Victim Injuries: Text Mining Study.	Journal of Medical Internet Research	2019
31304310	Erratum: Author Correction: Frequent discussion of insomnia and weight gain with glucocorticoid therapy: an analysis of Twitter posts.	NPJ Digit Med	2018
30213778	Automatic Extraction of Mental Health Disorders From Domestic Violence Police Narratives: Text Mining Study.	J Med Internet Res	2018
30340461	Using set theory to reduce redundancy in pathway sets.	BMC Bioinformatics	2018
29900005	Mapping biological process relationships and disease perturbations within a pathway network.	npj Systems Biology and Applications	2018
30272184	Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task.	J Am Med Inform Assoc	2018
29271009	Automatic mining of symptom severity from psychiatric evaluation notes.	International Journal of Methods in Psychiatric Research	2018
29650041	Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature.	J Biomed Semantics	2018
28381392	#WhyWeTweetMH: Understanding Why People Use Twitter to Discuss Mental Health Problems.	Journal of Medical Internet Research	2017
28602908	Learning to identify Protected Health Information by integrating knowledge- and data-driven algorithms: A case study on psychiatric evaluation notes.	Journal of Biomedical Informatics	2017
28423846	A Case Study on Sepsis Using PubMed and Deep Learning for Ontology Learning.	Stud Health Technol Inform	2017
26939790	Bias in the reporting of sex and age in biomedical research on mouse models.	Elife	2016
27246819	The BioHub Knowledge Base: Ontology and Repository for Sustainable Biosourcing.	J Biomed Semantics	2016
27331905	A Survey of Bioinformatics Database and Software Usage through Mining the Literature.	PLoS One	2016
26860263	Modelling and extraction of variability in free-text medication prescriptions from an anonymised primary care electronic medical record research database.	BMC Med Inform Decis Mak	2016
26678917	Disentangling the multigenic and pleiotropic nature of molecular function.	BMC Systems Biology	2015
26133479	Using local lexicalized rules to identify heart disease risk factors in clinical notes.	Journal of Biomedical Informatics	2015
26131352	Ambiguity and variability of database and software names in bioinformatics.	J Biomed Semantics	2015
26210359	Combining knowledge- and data-driven methods for de-identification of clinical narratives.	Journal of Biomedical Informatics	2015
26679379	Constructing a molecular interaction network for thyroid cancer via large-scale text mining of gene and pathway events.	BMC Systems Biology	2015
25008281	Text mining of cancer-related information: review of current status and future directions.	International Journal of Medical Informatics	2014
25521965	Molecular profiling of thyroid cancer subtypes using large-scale text mining.	BMC Medical Genomics	2014
24949194	Mining characteristics of epidemiological studies from Medline: a case study in obesity.	Journal of Biomedical Semantics	2014
25161253	Extracting patterns of database and software usage from the bioinformatics literature.	Bioinformatics	2014
24978826	The pain interactome: connecting pain-specific protein interactions.	Pain	2014
24555844	PathNER: a tool for systematic identification of biological pathway mentions in the literature.	BMC Systems Biology	2013
23768135	bioNerDS: exploring bioinformatics' database and software use through literature mining.	BMC Bioinformatics	2013
23605114	Combining rules and machine learning for extraction of temporal expressions and events from clinical narratives.	Journal of the American Medical Informatics Association : JAMIA	2013
23707966	Cataloging the biomedical world of pain through semi-automated curation of molecular interactions.	Database (Oxford)	2013
23365570	Literature mining solutions for life science research.	Adv Bioinformatics	2013
22711795	BioContext: an integrated text mining system for large-scale extraction and contextualization of biomolecular events.	Bioinformatics	2012
22879767	Topic categorisation of statements in suicide notes with integrated rules and machine learning.		2012
22529179	Towards semi-automated curation: using text mining to recreate the HIV-1, human protein interaction database.	Database : the journal of biological databases and curation	2012
21980353	pubmed2ensembl: a resource for mining the biological literature on genes.	PLoS One	2011
21388573	Mining semantic networks of bioinformatics e-resources from the literature.	J Biomed Semantics	2011