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Author Details

Armen Abnousi
2016
17
7
PMIDPaper TitleJournal TitlePublished Year
37425940Combinatorial transcription factor binding encodes cis-regulatory wiring of forebrain GABAergic neurogenesis.bioRxiv2023
35488276A systematic evaluation of Hi-C data enhancement methods for enhancing PLAC-seq and HiChIP data.Briefings in Bioinformatics2022
35685374SnapHiC2: A computationally efficient loop caller for single cell Hi-C data.Computational and Structural Biotechnology Journal2022
34524848Parallel characterization of cis-regulatory elements for multiple genes using CRISPRpath.Sci Adv2021
33545029HiC-ACT: improved detection of chromatin interactions from Hi-C data via aggregated Cauchy test.American Journal of Human Genetics2021
34921112Transcriptional network orchestrating regional patterning of cortical progenitors.Proc Natl Acad Sci U S A2021
34563051HPRep: Quantifying Reproducibility in HiChIP and PLAC-Seq Datasets.Curr Issues Mol Biol2021
34446921SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data.Nat Methods2021
34382190Proximity Ligation-Assisted ChIP-Seq (PLAC-Seq).Methods Mol Biol2021
34485947MUNIn: A statistical framework for identifying long-range chromatin interactions from multiple samples.Human Genetics and Genomics Advances2021
33057195Cell-type-specific 3D epigenomes in the developing human cortex.Nature2020
32533974Global analysis of histone modifications and long-range chromatin interactions revealed the differential cistrome changes and novel transcriptional players in human dilated cardiomyopathy.Journal of Molecular and Cellular Cardiology2020
31114059Publisher Correction: Sensory experience remodels genome architecture in neural circuit to drive motor learning.Nature2019
30986246MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments.PLoS Comput Biol2019
31068695Sensory experience remodels genome architecture in neural circuit to drive motor learning.Nature2019
29506470Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing.BMC Bioinformatics2018
27552220A Fast Alignment-Free Approach for De Novo Detection of Protein Conserved Regions.PLoS ONE2016
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