Author details

Full Name

Hiro Tsuruta

Affiliation

Stanford University

ORCID

Career Start Year

1988

Papers

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
26287631	Prion Protein-Antibody Complexes Characterized by Chromatography-Coupled Small-Angle X-Ray Scattering.	Biophys J	2015
25139911	Integrative structure-function mapping of the nucleoporin Nup133 suggests a conserved mechanism for membrane anchoring of the nuclear pore complex.	Mol Cell Proteomics	2014
23583912	The structure of yeast glutaminyl-tRNA synthetase and modeling of its interaction with tRNA.	J Mol Biol	2013
22547808	Trapping and structure determination of an intermediate in the allosteric transition of aspartate transcarbamoylase.	Proc Natl Acad Sci U S A	2012
22451934	Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect.	Proc Natl Acad Sci U S A	2012
22544723	Atomic structure of the nuclear pore complex targeting domain of a Nup116 homologue from the yeast, Candida glabrata.	Proteins	2012
22514181	An integrated high-throughput data acquisition system for biological solution X-ray scattering studies.	J Synchrotron Radiat	2012
21462184	Small angle X-ray scattering as a complementary tool for high-throughput structural studies.	Biopolymers	2011
21903166	Characterization of lipid matrices for membrane protein crystallization by high-throughput small angle X-ray scattering.	Methods	2011
21365675	Structure of the C-terminal domain of Saccharomyces cerevisiae Nup133, a component of the nuclear pore complex.	Proteins	2011
20310066	Structures of the autoproteolytic domain from the Saccharomyces cerevisiae nuclear pore complex component, Nup145.	Proteins	2010
20371334	Balanced electrostatic and structural forces guide the large conformational change associated with maturation of T = 4 virus.	Biophys J	2010
19458715	The origin of the electrostatic perturbation in acetoacetate decarboxylase.	Nature	2009
18004787	Use of L-asparagine and N-phosphonacetyl-L-asparagine to investigate the linkage of catalysis and homotropic cooperativity in E. coli aspartate transcarbomoylase.	Proteins	2008
18823998	Time evolution of the quaternary structure of Escherichia coli aspartate transcarbamoylase upon reaction with the natural substrates and a slow, tight-binding inhibitor.	J Mol Biol	2008
18785758	A covalent linker allows for membrane targeting of an oxylipin biosynthetic complex.	Biochemistry	2008
18801437	Experimental approaches for solution X-ray scattering and fiber diffraction.	Curr Opin Struct Biol	2008
18940605	Virus capsid expansion driven by the capture of mobile surface loops.	Structure	2008
18978942	Structures of the signal recognition particle receptor from the archaeon Pyrococcus furiosus: implications for the targeting step at the membrane.	PLoS One	2008
18582476	Detection of intermediates and kinetic control during assembly of bacteriophage P22 procapsid.	J Mol Biol	2008
18694757	Integration of small-angle X-ray scattering data into structural modeling of proteins and their assemblies.	J Mol Biol	2008
17567155	Conformational differences between Azotobacter vinelandii nitrogenase MoFe proteins as studied by small-angle X-ray scattering.	Biochemistry	2007
18001132	Probing the MgATP-bound conformation of the nitrogenase Fe protein by solution small-angle X-ray scattering.	Biochemistry	2007
18096501	Gain-of-function mutational activation of human tRNA synthetase procytokine.	Chem Biol	2007
17004708	N-phosphonacetyl-L-isoasparagine a potent and specific inhibitor of Escherichia coli aspartate transcarbamoylase.	J Med Chem	2006
15698563	Conformational changes of p97 during nucleotide hydrolysis determined by small-angle X-Ray scattering.	Structure	2005
16120448	Structure of the E.coli aspartate transcarbamoylase trapped in the middle of the catalytic cycle.	J Mol Biol	2005
15890205	A single amino acid substitution in the active site of Escherichia coli aspartate transcarbamoylase prevents the allosteric transition.	J Mol Biol	2005
15808863	Influence of nucleotide effectors on the kinetics of the quaternary structure transition of allosteric aspartate transcarbamylase.	J Mol Biol	2005
16095623	Cooperative reorganization of a 420 subunit virus capsid.	J Mol Biol	2005
14581486	A fluorescent probe-labeled Escherichia coli aspartate transcarbamoylase that monitors the allosteric conformational state.	J Biol Chem	2004
15210344	Evidence that a local refolding event triggers maturation of HK97 bacteriophage capsid.	J Mol Biol	2004
15207623	Conformational changes in Sindbis virions resulting from exposure to low pH and interactions with cells suggest that cell penetration may occur at the cell surface in the absence of membrane fusion.	Virology	2004
15014067	240s loop interactions stabilize the T state of Escherichia coli aspartate transcarbamoylase.	J Biol Chem	2004
12941707	Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2.	EMBO J	2003
12016227	Importance of domain closure for the catalysis and regulation of Escherichia coli aspartate transcarbamoylase.	J Biol Chem	2002
12359710	Stabilization of the R allosteric structure of Escherichia coli aspartate transcarbamoylase by disulfide bond formation.	J Biol Chem	2002
12399459	The role of intersubunit interactions for the stabilization of the T state of Escherichia coli aspartate transcarbamoylase.	J Biol Chem	2002
11170383	Characterization of subunit structural changes accompanying assembly of the bacteriophage P22 procapsid.	Biochemistry	2001
11356062	Fourier amplitude decay of electron cryomicroscopic images of single particles and effects on structure determination.	J Struct Biol	2001
11352920	Domain bridging interactions. A necessary contribution to the function and structure of Escherichia coli aspartate transcarbamoylase.	J Biol Chem	2001
11323717	Direct structural evidence for a concerted allosteric transition in Escherichia coli aspartate transcarbamoylase.	Nat Struct Biol	2001
11478862	Structure and mechanism of the RuvB Holliday junction branch migration motor.	J Mol Biol	2001
11518532	Analysis of rapid, large-scale protein quaternary structural changes: time-resolved X-ray solution scattering of Nudaurelia capensis omega virus (NomegaV) maturation.	J Mol Biol	2001
10625604	Three of the six possible intersubunit stabilizing interactions involving Glu-239 are sufficient for restoration of the homotropic and heterotropic properties of Escherichia coli aspartate transcarbamoylase.	J Biol Chem	2000
11000116	Topologically linked protein rings in the bacteriophage HK97 capsid.	Science	2000
11106733	Crystal and solution structures of an HslUV protease-chaperone complex.	Cell	2000
10660048	Maturation dynamics of a viral capsid: visualization of transitional intermediate states.	Cell	2000
10600558	Scaling structure factor amplitudes in electron cryomicroscopy using X-Ray solution scattering.	J Struct Biol	1999
10386880	The 80s loop of the catalytic chain of Escherichia coli aspartate transcarbamoylase is critical for catalysis and homotropic cooperativity.	Protein Sci	1999

1 - 50 of 67

Michael C Thompson

University of California

Career Start Year 2011

Number of shared co-authors 1

David A Jacques

University of New South Wales

Career Start Year 2007

Number of shared co-authors 4

Andrew E Whitten

Institute for Molecular Bioscience, University of Queensland

Career Start Year 2004

Number of shared co-authors 7

Frank Gabel

University Grenoble Alpes, CNRS

Career Start Year 2002

Number of shared co-authors 7

Greg L Hura

Lawrence Berkeley National Laboratory, University of California Santa Cruz

Career Start Year 2002

Number of shared co-authors 7

Sayan Gupta

Lawrence Berkeley National Laboratory

Career Start Year 2001

Number of shared co-authors 2

Anthony P Duff

Bragg Institute

Career Start Year 2000

Number of shared co-authors 7

James M Holton

Lawrence Berkeley National Laboratory

Career Start Year 1997

Number of shared co-authors 6

Chad A Brautigam

UT Southwestern Medical Center

Career Start Year 1997

Number of shared co-authors 2

Shira Albeck

Weizmann Institute of Science

Career Start Year 1996

Number of shared co-authors 12

Javier P??rez

(CNRS, Universite Paris-Sud

Career Start Year 1996

Number of shared co-authors 7

Clemens Vonrhein

Global Phasing Ltd

Career Start Year 1995

Number of shared co-authors 2

Tobin R Sosnick

Institute for Biophysical Dynamics, The University of Chicago

Career Start Year 1990

Number of shared co-authors 5

John F Hunt

Columbia University

Career Start Year 1986

Number of shared co-authors 14

Catherine L Lawson

Institute for Quantitative Biomedicine, State University of New Jersey

Career Start Year 1985

Number of shared co-authors 8

Vladimir N Malashkevich

Albert Einstein College of Medicine

Career Start Year 1982

Number of shared co-authors 9

Thomas Earnest

Washington University School of Medicine in St. Louis

Career Start Year 1982

Number of shared co-authors 4

Michal Hammel

Lawrence Berkeley National Laboratory

Career Start Year 1981

Number of shared co-authors 11

Udo Heinemann

Max-Delbruck-Center for Molecular Medicine in the Helmholtz Association (MDC)

Career Start Year 1980

Number of shared co-authors 11

Dmitri I Svergun

King's College London BHF Centre for Research Excellence

Career Start Year 1980

Number of shared co-authors 14

Thomas C Terwilliger

Los Alamos National Laboratory

Career Start Year 1980

Number of shared co-authors 15

Andrzej Joachimiak

Center for Structural Biology of Infectious Diseases, University of Chicago

Career Start Year 1979

Number of shared co-authors 13

Jill Trewhella

The University of Sydney

Career Start Year 1979

Number of shared co-authors 12

Tom Alber

University of California berkeley

Career Start Year 1976

Number of shared co-authors 3

Helen R Saibil

Institute of Structural and Molecular Biology, University of London

Career Start Year 1976

Number of shared co-authors 4

Ivan Rayment

College of Agricultural and Life Sciences, University of Wisconsin-Madison

Career Start Year 1976

Number of shared co-authors 2

George N Phillips

Rice University

Career Start Year 1974

Number of shared co-authors 7

Wayne A Hendrickson

Columbia University

Career Start Year 1968

Number of shared co-authors 15

Alan R Fersht

Medical Research Council Laboratory of Molecular Biology

Career Start Year 1967

Number of shared co-authors 2

David Eisenberg

university of california los angeles

Career Start Year 1963

Number of shared co-authors 2

row(s) 1 - 30 of 30

Andrej Sali (CM4AI)

University of California San Francisco

Co-authored papers 6

Seung Joong Kim

Korea Advanced Institute of Science and Technology (KAIST)

Co-authored papers 5

Anne Martel

Institut Laue-Langevin (ILL)

Co-authored papers 5

Keith O Hodgson

Stanford University

Co-authored papers 5

Stephen K Burley

The State University of New Jersey

Co-authored papers 4

Wah Chiu

Stanford University

Co-authored papers 4

Subbiah Parthasarathy

New York University Grossman School of Medicine

Co-authored papers 4

Thomas M Weiss

Stanford University

Co-authored papers 4

Patrice Vachette

Universite Paris-Saclay, CNRS, Institute for Integrative Biology of the Cell (I2BC)

Co-authored papers 4

J Michael Sauder

Eli Lilly and Co.

Co-authored papers 4

Michael P Rout

The Rockefeller University

Co-authored papers 4

Javier Fernandez-Martinez

The Rockefeller University

Co-authored papers 4

Tsutomu Matsui

Stanford University

Co-authored papers 3

Ursula Pieper

University of California san francisco

Co-authored papers 3

Stephen R Wasserman

Argonne National Laboratory

Co-authored papers 3

Jeremy Phillips

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory

Co-authored papers 3

Josef D Franke

Creighton University

Co-authored papers 3

Kevin T Bain

NYU Langone Hospital - Brooklyn Brooklyn

Co-authored papers 3

Tarun Gheyi

New York SGX Research Center for Structural Genomics

Co-authored papers 3

David Eliezer

Brain and Mind Research Institute

Co-authored papers 3

Shane Atwell

Lilly Research Laboratories

Co-authored papers 3

Devon A Thompson

Stanford University

Co-authored papers 3

Kelly K Lee

University of Washington

Co-authored papers 3

J S Emtage

Co-authored papers 3

Alasdair C Steven

National Institutes of Health

Co-authored papers 2

Lester G Carter

Stanford University

Co-authored papers 2

Steven C Almo

Albert Einstein College of Medicine

Co-authored papers 2

Jeffrey B Bonanno

Albert Einstein College of Medicine

Co-authored papers 2

John A Tainer

The University of Texas MD Anderson Cancer Center

Co-authored papers 2

Mark Dickey

Co-authored papers 2

1 - 30

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