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Author Details

John R Yates
TheScripps Research Institute
1960
1236
168
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36191829The Fragile X Messenger Ribonucleoprotein 1 Participates in Axon Guidance Mediated by the Wnt/Planar Cell Polarity Pathway.Neuroscience2023
36175661Targeted protein S-nitrosylation of ACE2 inhibits SARS-CoV-2 infection.Nat Chem Biol2023
36191829The Fragile X Messenger Ribonucleoprotein 1 Participates in Axon Guidance Mediated by the Wnt/Planar Cell Polarity Pathway.Neuroscience2023
37217653Intrinsic mesoscale properties of a Polycomb protein underpin heterochromatin fidelity.Nat Struct Mol Biol2023
37214937Evolving spike-protein <i>N</i>-glycosylation in SARS-CoV-2 variants.bioRxiv2023
37339972Trans-Golgi protein TVP23B regulates host-microbe interactions via Paneth cell homeostasis and Goblet cell glycosylation.Nat Commun2023
36824861Comparative membrane proteomics reveals diverse cell regulators concentrated at the nuclear envelope.bioRxiv2023
37397995<i>In vivo</i> Protein Footprinting Reveals the Dynamic Conformational Changes of Proteome of Multiple Tissues in Progressing Alzheimer's Disease.bioRxiv2023
36948700DeGlyPHER: Highly sensitive site-specific analysis of N-linked glycans on proteins.Methods Enzymol2023
37010760Identification of Arginylated Proteins by Mass Spectrometry.Methods Mol Biol2023
37010761Analysis of Arginylated Peptides by Subtractive Edman Degradation.Methods Mol Biol2023
37068109Insulin secretion deficits in a Prader-Willi syndrome β-cell model are associated with a concerted downregulation of multiple endoplasmic reticulum chaperones.PLoS Genet2023
37314928Nuclear translocation of an aminoacyl-tRNA synthetase may mediate a chronic "integrated stress response".Cell Rep2023
37066274Do perineuronal nets stabilize the engram of a synaptic circuit?bioRxiv2023
37059883Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2.Nat Cell Biol2023
36864200Initial recommendations for performing, benchmarking and reporting single-cell proteomics experiments.Nat Methods2023
37433644Comparative membrane proteomics reveals diverse cell regulators concentrated at the nuclear envelope.Life Sci Alliance2023
37237245Publisher Correction: Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2.Nat Cell Biol2023
36993270Phosphorylation of pyruvate dehydrogenase marks the inhibition of <i>in vivo</i> neuronal activity.bioRxiv2023
36682868Quantitative structural proteomics in living cells by covalent protein painting.Methods Enzymol2023
36668891Montane Rattlesnakes in México: Venoms of <i>Crotalus tancitarensis</i> and Related Species within the <i>Crotalus intermedius</i> Group.Toxins (Basel)2023
37527410Differential Precipitation of Proteins: A Simple Protein Fractionation Strategy to Gain Biological Insights with Proteomics.J Am Soc Mass Spectrom2023
37495304Metarhizium anisopliae E6 secretome reveals molecular players in host specificity and toxicity linked to cattle tick infection.Fungal Biol2023
36913499Perm1 Protects the Heart From Pressure Overload-Induced Dysfunction by Promoting Oxidative Metabolism.Circulation2023
37527410Differential Precipitation of Proteins: A Simple Protein Fractionation Strategy to Gain Biological Insights with Proteomics.J Am Soc Mass Spectrom2023
37495304Metarhizium anisopliae E6 secretome reveals molecular players in host specificity and toxicity linked to cattle tick infection.Fungal Biol2023
37059883Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2.Nat Cell Biol2023
36993270Phosphorylation of pyruvate dehydrogenase marks the inhibition of <i>in vivo</i> neuronal activity.bioRxiv2023
37217653Intrinsic mesoscale properties of a Polycomb protein underpin heterochromatin fidelity.Nat Struct Mol Biol2023
36948700DeGlyPHER: Highly sensitive site-specific analysis of N-linked glycans on proteins.Methods Enzymol2023
37214937Evolving spike-protein <i>N</i>-glycosylation in SARS-CoV-2 variants.bioRxiv2023
37314928Nuclear translocation of an aminoacyl-tRNA synthetase may mediate a chronic "integrated stress response".Cell Rep2023
37010760Identification of Arginylated Proteins by Mass Spectrometry.Methods Mol Biol2023
37010761Analysis of Arginylated Peptides by Subtractive Edman Degradation.Methods Mol Biol2023
37339972Trans-Golgi protein TVP23B regulates host-microbe interactions via Paneth cell homeostasis and Goblet cell glycosylation.Nat Commun2023
37237245Publisher Correction: Arg-tRNA synthetase links inflammatory metabolism to RNA splicing and nuclear trafficking via SRRM2.Nat Cell Biol2023
37433644Comparative membrane proteomics reveals diverse cell regulators concentrated at the nuclear envelope.Life Sci Alliance2023
37068109Insulin secretion deficits in a Prader-Willi syndrome β-cell model are associated with a concerted downregulation of multiple endoplasmic reticulum chaperones.PLoS Genet2023
37397995<i>In vivo</i> Protein Footprinting Reveals the Dynamic Conformational Changes of Proteome of Multiple Tissues in Progressing Alzheimer's Disease.bioRxiv2023
37066274Do perineuronal nets stabilize the engram of a synaptic circuit?bioRxiv2023
36913499Perm1 Protects the Heart From Pressure Overload-Induced Dysfunction by Promoting Oxidative Metabolism.Circulation2023
36682868Quantitative structural proteomics in living cells by covalent protein painting.Methods Enzymol2023
36668891Montane Rattlesnakes in México: Venoms of <i>Crotalus tancitarensis</i> and Related Species within the <i>Crotalus intermedius</i> Group.Toxins (Basel)2023
36864200Initial recommendations for performing, benchmarking and reporting single-cell proteomics experiments.Nat Methods2023
36824861Comparative membrane proteomics reveals diverse cell regulators concentrated at the nuclear envelope.bioRxiv2023
36175661Targeted protein S-nitrosylation of ACE2 inhibits SARS-CoV-2 infection.Nat Chem Biol2023
35259089Quantitative transportomics identifies Kif5a as a major regulator of neurodegeneration.Elife2022
35972904Shared and Distinctive Neighborhoods of Emerin and Lamin B Receptor Revealed by Proximity Labeling and Quantitative Proteomics.J Proteome Res2022
35396330Quantitative BONCAT Allows Identification of Newly Synthesized Proteins after Optic Nerve Injury.J Neurosci2022
36179689Human immunoglobulin repertoire analysis guides design of vaccine priming immunogens targeting HIV V2-apex broadly neutralizing antibody precursors.Immunity2022
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Collaborators

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Co-authored papers 84
University of Illinois at Urbana-Champaign
Co-authored papers 80
Stanford University
Co-authored papers 79
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Massachusetts Institute of Technology
Co-authored papers 79
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UCL Institute of Ophthalmology, University College London
Co-authored papers 39
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Co-authored papers 27
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Co-authored papers 18
University of Washington
Co-authored papers 17
Amgen Inc.
Co-authored papers 16
University of Washington
Co-authored papers 15
Co-authored papers 15
University of California berkeley
Co-authored papers 14
US Military Malaria Vaccine Program, Naval Medical Research Center
Co-authored papers 14
The Scripps Research Institute
Co-authored papers 14
National Institute of Biological Sciences
Co-authored papers 14
Co-authored papers 14
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 14
University of Virginia
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