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Author Details

Lincoln Stein
Ontario Institute for Cancer Research, University Avenue
1986
233
81
Antoine Forget (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36648320JBrowse Jupyter: a Python interface to JBrowse 2.Bioinformatics2023
36648320JBrowse Jupyter: a Python interface to JBrowse 2.Bioinformatics2023
37467006Illuminate the Functions of Dark Proteins Using the Reactome-IDG Web Portal.Curr Protoc2023
37333417Illuminating Dark Proteins using Reactome Pathways.bioRxiv2023
37069644JBrowse 2: a modular genome browser with views of synteny and structural variation.Genome Biol2023
36697832Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.Nature2023
37053306Using the Reactome Database.Curr Protoc2023
37053306Using the Reactome Database.Curr Protoc2023
37467006Illuminate the Functions of Dark Proteins Using the Reactome-IDG Web Portal.Curr Protoc2023
37333417Illuminating Dark Proteins using Reactome Pathways.bioRxiv2023
37069644JBrowse 2: a modular genome browser with views of synteny and structural variation.Genome Biol2023
36697832Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.Nature2023
34788843The reactome pathway knowledgebase 2022.Nucleic Acids Res2022
35618754Author Correction: scRNA-seq in medulloblastoma shows cellular heterogeneity and lineage expansion support resistance to SHH inhibitor therapy.Nat Commun2022
36131014Failure of human rhombic lip differentiation underlies medulloblastoma formation.Nature2022
35853870A brain precursor atlas reveals the acquisition of developmental-like states in adult cerebral tumours.Nat Commun2022
36446943Author Correction: Failure of human rhombic lip differentiation underlies medulloblastoma formation.Nature2022
36481739Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower.Nat Commun2022
36481665Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns.Nat Commun2022
34788843The reactome pathway knowledgebase 2022.Nucleic Acids Res2022
35247876Reconstructing Complex Cancer Evolutionary Histories from Multiple Bulk DNA Samples Using Pairtree.Blood Cancer Discov2022
35134929WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans.Genetics2022
35348650Evaluating the predictive accuracy of curated biological pathways in a public knowledgebase.Database (Oxford)2022
35348650Evaluating the predictive accuracy of curated biological pathways in a public knowledgebase.Database (Oxford)2022
35853870A brain precursor atlas reveals the acquisition of developmental-like states in adult cerebral tumours.Nat Commun2022
35618754Author Correction: scRNA-seq in medulloblastoma shows cellular heterogeneity and lineage expansion support resistance to SHH inhibitor therapy.Nat Commun2022
36446943Author Correction: Failure of human rhombic lip differentiation underlies medulloblastoma formation.Nature2022
36481739Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower.Nat Commun2022
36481665Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns.Nat Commun2022
36131014Failure of human rhombic lip differentiation underlies medulloblastoma formation.Nature2022
35247876Reconstructing Complex Cancer Evolutionary Histories from Multiple Bulk DNA Samples Using Pairtree.Blood Cancer Discov2022
35134929WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans.Genetics2022
32486891Using Reactome to build an autophagy mechanism knowledgebase.Autophagy2021
32486891Using Reactome to build an autophagy mechanism knowledgebase.Autophagy2021
33741928The transcriptional landscape of Shh medulloblastoma.Nat Commun2021
34007079Author Correction: The NCI Genomic Data Commons.Nat Genet2021
33619384The NCI Genomic Data Commons.Nat Genet2021
34196689JBrowseR: an R interface to the JBrowse 2 genome browser.Bioinformatics2021
33978761The Dockstore: enhancing a community platform for sharing reproducible and accessible computational protocols.Nucleic Acids Res2021
33170273Gramene 2021: harnessing the power of comparative genomics and pathways for plant research.Nucleic Acids Res2021
34664389COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
34664389COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
34939300COVID-19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
35072136GA4GH: International policies and standards for data sharing across genomic research and healthcare.Cell Genom2021
33741928The transcriptional landscape of Shh medulloblastoma.Nat Commun2021
33619384The NCI Genomic Data Commons.Nat Genet2021
35072136GA4GH: International policies and standards for data sharing across genomic research and healthcare.Cell Genom2021
34939300COVID-19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
34664389COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
34664389COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.Mol Syst Biol2021
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Collaborators

NYU Grossman School of Medicine
Co-authored papers 34
USDA ARS NAA Robert W. Holley Center for Agriculture and Health
Co-authored papers 30
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 23
Oregon Health and Science University
Co-authored papers 22
Ontario Institute for Cancer Research
Co-authored papers 22
Ontario Institute for Cancer Research
Co-authored papers 21
NYU Grossman School of Medicine
Co-authored papers 17
Oregon State University
Co-authored papers 17
California Institute of Technology
Co-authored papers 16
Ontario Institute for Cancer Research
Co-authored papers 15
Co-authored papers 15
Co-authored papers 15
Ontario Institute for Cancer Research
Co-authored papers 14
Co-authored papers 13
Heidelberg University Biochemistry Center
Co-authored papers 13
California Institute of Technology
Co-authored papers 13
California Institute of Technology
Co-authored papers 13
EMD Serono Research & Development Institute, Inc. (an affiliate of Merck KGaA)
Co-authored papers 13
Ontario Institute for Cancer Research
Co-authored papers 12
California Institute of Technology
Co-authored papers 12
Co-authored papers 12
University of Cambridge
Co-authored papers 11
Ontario Institute for Cancer Research
Co-authored papers 11
Co-authored papers 11
Ontario Institute for Cancer Research
Co-authored papers 11
Lawrence Berkeley National Laboratory
Co-authored papers 11
Co-authored papers 10
Lunenfeld Tanenbaum Research Institute, Mount Sinai Hospital, University of Toronto
Co-authored papers 10
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Co-authored papers 10