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Author Details

Yidong Chen
The University of Texas Health Science Center at San Antonio
2001
171
35
PMIDPaper TitleJournal TitlePublished Year
36731891BRCA1 deficiency in mature CD8<sup>+</sup> T lymphocytes impairs antitumor immunity.J Immunother Cancer2023
37904250mTOR inhibition abrogates human mammary stem cells and early breast cancer progression markers.Breast Cancer Res2023
37650863Loss of BRD4 induces cell senescence in HSC/HPCs by deregulating histone H3 clipping.EMBO Rep2023
37733728Understanding painful versus non-painful dental pain in female and male patients: A transcriptomic analysis of human biopsies.PLoS One2023
37573456Sex-dependent differences in the genomic profile of lingual sensory neurons in naïve and tongue-tumor bearing mice.Sci Rep2023
37493258Preclinical Development of Brain Permeable ERβ Agonist for the Treatment of Glioblastoma.Mol Cancer Ther2023
37174684The RNA Demethylase ALKBH5 Maintains Endoplasmic Reticulum Homeostasis by Regulating UPR, Autophagy, and Mitochondrial Function.Cells2023
37359725DepLink: an R Shiny app to systematically link genetic and pharmacologic dependencies of cancer.Bioinform Adv2023
37093199Phase II Investigation of TVB-2640 (Denifanstat) with Bevacizumab in Patients with First Relapse High-Grade Astrocytoma.Clin Cancer Res2023
36656901Hepatic ribosomal protein S6 (Rps6) insufficiency results in failed bile duct development and loss of hepatocyte viability; a ribosomopathy-like phenotype that is partially p53-dependent.PLoS Genet2023
36696581Redundant Signaling as the Predominant Mechanism for Resistance to Antibodies Targeting the Type-I Insulin-Like Growth Factor Receptor in Cells Derived from Childhood Sarcoma.Mol Cancer Ther2023
36624165Developmentally programmed early-age skin localization of iNKT cells supports local tissue development and homeostasis.Nat Immunol2023
36652263Lysine-specific histone demethylase 1A (KDM1A/LSD1) inhibition attenuates DNA double-strand break repair and augments the efficacy of temozolomide in glioblastoma.Neuro Oncol2023
36773293Nitric oxide suppression by secreted frizzled-related protein 2 drives retinoblastoma.Cell Rep2023
34610962GLI3 Is Stabilized by SPOP Mutations and Promotes Castration Resistance via Functional Cooperation with Androgen Receptor in Prostate Cancer.Mol Cancer Res2022
35610507Targeting aberrant replication and DNA repair events for treating breast cancers.Commun Biol2022
35725429On the role of deep learning model complexity in adversarial robustness for medical images.BMC Med Inform Decis Mak2022
35395812SETDB1 interactions with PELP1 contributes to breast cancer endocrine therapy resistance.Breast Cancer Res2022
35568265The antidepressant imipramine inhibits breast cancer growth by targeting estrogen receptor signaling and DNA repair events.Cancer Lett2022
35452563SIRT1 inhibition-induced senescence as a strategy to prevent prostate cancer progression.Mol Carcinog2022
35657614Development and characterization of a mass cytometry panel for detecting the effect of acute doxorubicin exposure on murine cardiac nonmyocytes.Am J Physiol Heart Circ Physiol2022
35657344Integrin alpha 6 is upregulated and drives hepatocellular carcinoma progression through integrin α6β4 complex.Int J Cancer2022
36553530Characterizing Macrophages Diversity in COVID-19 Patients Using Deep Learning.Genes (Basel)2022
36313732Mechanisms of venetoclax resistance and solutions.Front Oncol2022
36242092PARP1-MGMT complex underpins pathway crosstalk in O<sup>6</sup>-methylguanine repair.J Hematol Oncol2022
36358818Inhibition of LIFR Blocks Adiposity-Driven Endometrioid Endometrial Cancer Growth.Cancers (Basel)2022
36230685Transformer for Gene Expression Modeling (T-GEM): An Interpretable Deep Learning Model for Gene Expression-Based Phenotype Predictions.Cancers (Basel)2022
35950923A First-in-Class Inhibitor of ER Coregulator PELP1 Targets ER+ Breast Cancer.Cancer Res2022
35255138Comparative Transcriptome Analysis of Superficial and Deep Partial-Thickness Burn Wounds in Yorkshire vs Red Duroc Pigs.J Burn Care Res2022
35288544Global profiling reveals common and distinct N6-methyladenosine (m6A) regulation of innate immune responses during bacterial and viral infections.Cell Death Dis2022
35212622Signature-scoring methods developed for bulk samples are not adequate for cancer single-cell RNA sequencing data.Elife2022
34997546Single-cell RNA profiling identifies diverse cellular responses to EWSR1/FLI1 downregulation in Ewing sarcoma cells.Cell Oncol (Dordr)2022
35205680Global Genomic and Proteomic Analysis Identified Critical Pathways Modulated by Proto-Oncogene PELP1 in TNBC.Cancers (Basel)2022
35303054M6A RNA Methylation Regulates Histone Ubiquitination to Support Cancer Growth and Progression.Cancer Res2022
34929734Deep learning tackles single-cell analysis-a survey of deep learning for scRNA-seq analysis.Brief Bioinform2022
34737198Vertical Inhibition of the RAF-MEK-ERK Cascade Induces Myogenic Differentiation, Apoptosis, and Tumor Regression in <i>H/NRAS<sup>Q61X</sup></i> Mutant Rhabdomyosarcoma.Mol Cancer Ther2022
32447501Genetic markers for treatment-related pancreatitis in a cohort of Hispanic children with acute lymphoblastic leukemia.Support Care Cancer2021
33484826Prediction and interpretation of cancer survival using graph convolution neural networks.Methods2021
33832920Bloom syndrome in a Mexican American family with rhabdomyosarcoma: evidence of a Mexican founder mutation.Cold Spring Harb Mol Case Stud2021
34462573Correction to: Campylobacter infection promotes IFNγ-dependent intestinal pathology via ILC3 to ILC1 conversion.Mucosal Immunol2021
34716410LIFR inhibition enhances the therapeutic efficacy of HDAC inhibitors in triple negative breast cancer.Commun Biol2021
34417605m6A-express: uncovering complex and condition-specific m6A regulation of gene expression.Nucleic Acids Res2021
34417181Predicting and characterizing a cancer dependency map of tumors with deep learning.Sci Adv2021
34118180Chloride channel accessory 1 integrates chloride channel activity and mTORC1 in aging-related kidney injury.Aging Cell2021
33980137CancerSiamese: one-shot learning for predicting primary and metastatic tumor types unseen during model training.BMC Bioinformatics2021
33214656Campylobacter infection promotes IFNγ-dependent intestinal pathology via ILC3 to ILC1 conversion.Mucosal Immunol2021
33420019Interaction between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion Negative Rhabdomyosarcoma.Nat Commun2021
32533098Knock-out of Hopx disrupts stemness and quiescence of hematopoietic stem cells in mice.Oncogene2020
31813953Deep learning of pharmacogenomics resources: moving towards precision oncology.Brief Bioinform2020
31894239Inhibitory Interplay of SULT2B1b Sulfotransferase with AKR1C3 Aldo-keto Reductase in Prostate Cancer.Endocrinology2020
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Collaborators

Bing-Hung Chen
Kaohsiung Medical University
Co-authored papers 23
Peter J Houghton
The University of Texas Health Science Center at San Antonio
Co-authored papers 14
Tim H-M Huang
University of Texas Health San Antonio (UTHSA)
Co-authored papers 13
Siyuan Zheng
Greehey Children's Cancer Research Institute
Co-authored papers 8
Susan T Weintraub
University of Texas Health Science Center at San Antonio Texas78229 USA.
Co-authored papers 5
Robin J Leach
University of Texas Health San Antonio
Co-authored papers 3
Ian M Thompson
CHRISTUS Santa Rosa Hospital-Medical Center
Co-authored papers 3
Raushan T Kurmasheva
The University of Texas Health Science Center at San Antonio
Co-authored papers 3
Elizabeth R Lawlor
Seattle Children's Research Institute
Co-authored papers 3
Teresa L Johnson-Pais
University of Texas Health San Antonio
Co-authored papers 3
Michael A Liss
University of Texas Health San Antonio
Co-authored papers 3
Ganesh V Raj
University of Texas Southwestern Medical Center at Dallas
Co-authored papers 2
David A Wheeler
Baylor College of Medicine
Co-authored papers 2
Paul S Meltzer
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 2
Nicholas W Wood
UCL Queen Square Institute of Neurology
Co-authored papers 2
Chun-Liang Chen
National Dong Hwa University
Co-authored papers 2
Jyoti Srivastava
Moffitt Cancer Center
Co-authored papers 2
John G Kuhn
Co-authored papers 2
Kevin G Becker
National Institute on Aging, National Institutes of Health
Co-authored papers 2
Jeffrey A Toretsky
Georgetown University Medical Center, Georgetown University
Co-authored papers 2
Gregory J Aune
Co-authored papers 2
Stephen L Lessnick
The Ohio State University College of Medicine
Co-authored papers 2
Joel E Michalek
University of Texas Health Science Center
Co-authored papers 2
Dias Kurmashev
Greehey Children's Cancer Research Institute
Co-authored papers 2
Kimberly Stegmaier
Dana-Farber Cancer Institute
Co-authored papers 2
Rong Li
University of Texas Health
Co-authored papers 2
Zhen Yu
Co-authored papers 2
Aaron M Horning
Co-authored papers 2
Yuan Jiang
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 1
Jo Lynne Rokita
Co-authored papers 1
Release 1.2