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Author Details

Yoshiyuki Suzuki
Nagoya City University
1997
88
29
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37163224Current trends in RNA virus detection through metatranscriptome sequencing data.FEBS Open Bio2023
37629491Predicting Dominant Genotypes in Norovirus Seasons in Japan.Life (Basel)2023
37515184Molecular Evolutionary Analyses of the RNA-Dependent RNA Polymerase (<i>RdRp</i>) Region and <i>VP1</i> Gene in Human Norovirus Genotypes GII.P6-GII.6 and GII.P7-GII.6.Viruses2023
35149760Adaptive laboratory evolution in S. cerevisiae highlights role of transcription factors in fungal xenobiotic resistance.Commun Biol2022
32835005Methods for making multiple alignment of genomic sequences for severe acute respiratory syndrome coronavirus 2.Meta Gene2020
29702129An endogenous adeno-associated virus element in elephants.Virus Res2019
30804908Predicting Directions of Changes in Genotype Proportions Between Norovirus Seasons in Japan.Front Microbiol2019
30766516Study of Complete Genome Sequences of Rotavirus A Epidemics and Evolution in Japan in 2012-2014.Front Microbiol2019
29403456Genetic Analysis of Human Norovirus Strains in Japan in 2016-2017.Front Microbiol2018
27853052Co-evolution in a putative bundling signal of bluetongue and epizootic hemorrhagic disease viruses.Genes Genet Syst2017
28487679Molecular Evolution of the RNA-Dependent RNA Polymerase and Capsid Genes of Human Norovirus Genotype GII.2 in Japan during 2004-2015.Front Microbiol2017
28419512Predicting receptor functionality of signaling lymphocyte activation molecule for measles virus hemagglutinin by docking simulation.Microbiol Immunol2017
29259596Molecular Evolution of the <i>VP1</i> Gene in Human Norovirus GII.4 Variants in 1974-2015.Front Microbiol2017
28750901Complex reassortment events of unusual G9P[4] rotavirus strains in India between 2011 and 2013.Infect Genet Evol2017
28768857Molecular Function Analysis of Rabies Virus RNA Polymerase L Protein by Using an L Gene-Deficient Virus.J Virol2017
27399914Computational and molecular analysis of conserved influenza A virus RNA secondary structures involved in infectious virion production.RNA Biol2016
26456928Comparison of the primary structures, cytotoxicities, and affinities to phospholipids of five kinds of cytotoxins from the venom of Indian cobra, Naja naja.Comp Biochem Physiol C Toxicol Pharmacol2016
27174689An RNA-dependent RNA polymerase gene in bat genomes derived from an ancient negative-strand RNA virus.Sci Rep2016
27168450Predicting genotype compositions in norovirus seasons in Japan.Microbiol Immunol2016
27384324Molecular evolution of the capsid gene in human norovirus genogroup II.Sci Rep2016
27290643Selection pressure on human STR loci and its relevance in repeat expansion disease.Mol Genet Genomics2016
27518265Exaptation of Bornavirus-Like Nucleoprotein Elements in Afrotherians.PLoS Pathog2016
25893173Selecting vaccine strains for H3N2 human influenza A virus.Meta Gene2015
26224654A candidate packaging signal of human rotavirus differentiating Wa-like and DS-1-like genomic constellations.Microbiol Immunol2015
25224974A possible packaging signal in the rotavirus genome.Genes Genet Syst2014
25475938Origin of an endogenous bornavirus-like nucleoprotein element in thirteen-lined ground squirrels.Genes Genet Syst2014
23146832Evolution of complementary nucleotides in 5' and 3' untranslated regions of influenza A virus genomic segments.Infect Genet Evol2013
24463525Predictability of antigenic evolution for H3N2 human influenza A virus.Genes Genet Syst2013
23938751Comprehensive analysis of endogenous bornavirus-like elements in eukaryote genomes.Philos Trans R Soc Lond B Biol Sci2013
23403095Detection of positive selection eliminating effects of structural constraints in hemagglutinin of H3N2 human influenza A virus.Infect Genet Evol2013
22258255Evidence for N-glycan shielding of antigenic sites during evolution of human influenza A virus hemagglutinin.J Virol2012
23189203Prediction of protein-destabilizing polymorphisms by manual curation with protein structure.PLoS One2012
22808159Compensatory evolution of net-charge in influenza A virus hemagglutinin.PLoS One2012
20926638Evolutionary history of dog rabies in Brazil.J Gen Virol2011
22362027Positive selection for gains of N-linked glycosylation sites in hemagglutinin during evolution of H3N2 human influenza A virus.Genes Genet Syst2011
21912690No evidence for natural selection on endogenous borna-like nucleoprotein elements after the divergence of Old World and New World monkeys.PLoS One2011
21670552Overestimation of nonsynonymous/synonymous rate ratio by reverse-translation of aligned amino acid sequences.Genes Genet Syst2011
20018256Low genetic diversities of rabies virus populations within different hosts in Brazil.Infect Genet Evol2010
21415566Statistical methods for detecting natural selection from genomic data.Genes Genet Syst2010
20457891Is positive selection responsible for the evolution of a duplicate UV-sensitive opsin gene in Heliconius butterflies?Proc Natl Acad Sci U S A2010
20546849A phylogenetic approach to detecting reassortments in viruses with segmented genomes.Gene2010
20565254The neutral theory of molecular evolution in the genomic era.Annu Rev Genomics Hum Genet2010
20054395Endogenous non-retroviral RNA virus elements in mammalian genomes.Nature2010
19393176The evolutionary study of small RNA-directed gene silencing pathways by investigating RNase III enzymes.Gene2009
20007900Mapping human genetic diversity in Asia.Science2009
19581348Methods for incorporating the hypermutability of CpG dinucleotides in detecting natural selection operating at the amino acid sequence level.Mol Biol Evol2009
19339501Reliabilities of identifying positive selection by the branch-site and the site-prediction methods.Proc Natl Acad Sci U S A2009
18089548The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts.Nucleic Acids Res2008
18848975Positive selection operates continuously on hemagglutinin during evolution of H3N2 human influenza A virus.Gene2008
18835337The evolutionary relationship between gene duplication and alternative splicing.Gene2008
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Collaborators

Takashi Gojobori
Co-authored papers 33
Kazuho Ikeo
Co-authored papers 10
Chisato Yamasaki
Osaka University
Co-authored papers 4
Sumio Sugano
Co-authored papers 3
Sangsoo Kim
Co-authored papers 3
Naruya Saitou
National Institute of Genetics
Co-authored papers 3
Winston Hide
Harvard Medical School
Co-authored papers 2
Laurens G Wilming
Co-authored papers 2
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 2
Vladimir Kuryshev
Heidelberg University
Co-authored papers 2
Marie-Anne Debily
Co-authored papers 2
Charles Auffray
European Institute for Systems Biology and Medicine
Co-authored papers 2
Danielle Thierry-Mieg
Co-authored papers 2
Mary Shimoyama
Medical College of Wisconsin
Co-authored papers 2
Sandro J de Souza
Universidade Federal do Rio Grande do Norte
Co-authored papers 2
Zhu Chen
Yong Loo Lin School of Medicine, National University of Singapore
Co-authored papers 2
Boris Lenhard
MRC London Institute of Medical Sciences
Co-authored papers 2
Osamu Ohara
Co-authored papers 2
Claire O'Donovan
European Bioinformatics Institute
Co-authored papers 2
Anne Estreicher
carnegie mellon university - 1 rue Michel Servet CH-1 Geneva 4
Co-authored papers 2
Peter J Tonellato
University of Missouri School of Medicine
Co-authored papers 2
Stefan Wiemann
Co-authored papers 2
Jean Thierry-Mieg
Co-authored papers 2
Yutaka Suzuki
Co-authored papers 2
Li Jin
Fudan University
Co-authored papers 1
Leah E Cowen
University of Toronto
Co-authored papers 1
Jacob D Durrant
University of Pittsburgh
Co-authored papers 1
Jun Takehisa
Co-authored papers 1
Edison T Liu
USA The Jackson Laboratory Cancer Center
Co-authored papers 1
Reysha Patel
University of California
Co-authored papers 1
Release 1.2