Author details

Full Name

Stephen J Eglen

Affiliation

University of Cambridge

ORCID

Career Start Year

1996

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36791095	Bayesian model selection for multilevel models using integrated likelihoods.	PLoS One	2023
36824503	Sepsis-3 criteria in AmsterdamUMCdb: open-source code implementation.	GigaByte	2022
34470252	Causality indices for bivariate time series data: A comparative review of performance.	Chaos	2021
33839851	DeepClean: Self-Supervised Artefact Rejection for Intensive Care Waveform Data Using Deep Generative Learning.	Acta Neurochir Suppl	2021
33170857	Ten simple rules for writing Dockerfiles for reproducible data science.	PLoS Comput Biol	2020
32026463	From random to regular: Variation in the patterning of retinal mosaics.	J Comp Neurol	2020
31073937	Burst Detection Methods.	Adv Neurobiol	2019
31748598	Functional characterization of human pluripotent stem cell-derived cortical networks differentiated on laminin-521 substrate: comparison to rat cortical cultures.	Sci Rep	2019
30273353	meaRtools: An R package for the analysis of neuronal networks recorded on microelectrode arrays.	PLoS Comput Biol	2018
33530668	Recent developments in scholarly publishing to improve research practices in the life sciences.	Emerg Top Life Sci	2018
28542156	Toward standard practices for sharing computer code and programs in neuroscience.	Nat Neurosci	2017
28322188	A molecular mechanism for the topographic alignment of convergent neural maps.	Elife	2017
26211975	Canalization of genetic and pharmacological perturbations in developing primary neuronal activity patterns.	Neuropharmacology	2016
27415786	Ten Simple Rules for Taking Advantage of Git and GitHub.	PLoS Comput Biol	2016
27098024	A comparison of computational methods for detecting bursts in neuronal spike trains and their application to human stem cell-derived neuronal networks.	J Neurophysiol	2016
27030758	Homeostatic Activity-Dependent Tuning of Recurrent Networks for Robust Propagation of Activity.	J Neurosci	2016
27028607	Characterization of Early Cortical Neural Network Development in Multiwell Microelectrode Array Plates.	J Biomol Screen	2016
26727264	Geniculo-Cortical Projection Diversity Revealed within the Mouse Visual Thalamus.	PLoS One	2016
25367067	Quantitative assessment of computational models for retinotopic map formation.	Dev Neurobiol	2015
26590111	Estimating the location and size of retinal injections from orthogonal images of an intact retina.	BMC Neurosci	2015
26617494	Editorial: Quantitative Analysis of Neuroanatomy.	Front Neuroanat	2015
25626996	Quantitative differences in developmental profiles of spontaneous activity in cortical and hippocampal cultures.	Neural Dev	2015
24475081	Can retinal ganglion cell dipoles seed iso-orientation domains in the visual cortex?	PLoS One	2014
25339742	Detecting pairwise correlations in spike trains: an objective comparison of methods and application to the study of retinal waves.	J Neurosci	2014
24943946	Open access: sharing your data is easier than you think.	Nature	2014
24666584	A data repository and analysis framework for spontaneous neural activity recordings in developing retina.	Gigascience	2014
24366261	Following the ontogeny of retinal waves: pan-retinal recordings of population dynamics in the neonatal mouse.	J Physiol	2014
23576980	Neural circuits for peristaltic wave propagation in crawling Drosophila larvae: analysis and modeling.	Front Comput Neurosci	2013
22396220	Neuronal clustering and fasciculation phenotype in Dscam- and Bax-deficient mouse retinas.	J Comp Neurol	2012
23022539	GABAergic control of retinal ganglion cell dendritic development.	Neuroscience	2012
23110776	Parasol cell mosaics are unlikely to drive the formation of structured orientation maps in primary visual cortex.	Vis Neurosci	2012
21684148	Modeling developmental patterns of spontaneous activity.	Curr Opin Neurobiol	2011
19714211	A quick guide to teaching R programming to computational biology students.	PLoS Comput Biol	2009
20011124	A multi-component model of the developing retinocollicular pathway incorporating axonal and synaptic growth.	PLoS Comput Biol	2009
20041207	Burst-time-dependent plasticity robustly guides ON/OFF segregation in the lateral geniculate nucleus.	PLoS Comput Biol	2009
19639040	Self-organization in the developing nervous system: theoretical models.	HFSP J	2009
19763323	Theoretical models of spontaneous activity generation and propagation in the developing retina.	Mol Biosyst	2009
18334045	Spatial constraints underlying the retinal mosaics of two types of horizontal cells in cat and macaque.	Vis Neurosci	2008
18644136	Analysis of spatial relationships in three dimensions: tools for the study of nerve cell patterning.	BMC Neurosci	2008
16510463	Development of regular cellular spacing in the retina: theoretical models.	Math Med Biol	2006
15851520	LL5beta: a regulator of postsynaptic differentiation identified in a screen for synaptically enriched transcripts at the neuromuscular junction.	J Cell Biol	2005
16469193	Homotypic constraints dominate positioning of on- and off-center beta retinal ganglion cells.	Vis Neurosci	2005
12722109	Determinants of the exclusion zone in dopaminergic amacrine cell mosaics.	J Comp Neurol	2003
12930801	Developmental modulation of retinal wave dynamics: shedding light on the GABA saga.	J Neurosci	2003
14556292	Dopaminergic amacrine cells in the inner nuclear layer and ganglion cell layer comprise a single functional retinal mosaic.	J Comp Neurol	2003
14687538	Mapping by waves. Patterned spontaneous activity regulates retinotopic map refinement.	Neuron	2003
12684472	Developmental loss of synchronous spontaneous activity in the mouse retina is independent of visual experience.	J Neurosci	2003
12403711	Influence of cell fate mechanisms upon retinal mosaic formation: a modelling study.	Development	2002
12424272	Segregation of ON and OFF retinogeniculate connectivity directed by patterned spontaneous activity.	J Neurophysiol	2002
11173250	Development of retinal ganglion cell structure and function.	Prog Retin Eye Res	2001

1 - 50 of 55

Malcolm G Campbell

Stanford University School of Medicine

Career Start Year 2012

Number of shared co-authors 0

Daniel F English

Virginia Tech

Career Start Year 2007

Number of shared co-authors 0

Guisheng Zhong

ShanghaiTech University

Career Start Year 2006

Number of shared co-authors 0

Santiago B Rompani

Institute of Molecular and Clinical Ophthalmology Basel

Career Start Year 2005

Number of shared co-authors 0

Phillip Larimer

University of California san francisco

Career Start Year 2004

Number of shared co-authors 0

Quanxin Wang

School of Pharmaceutical Sciences, Peking University

Career Start Year 2004

Number of shared co-authors 1

Sean Hill

Ecole polytechnique federale de Lausanne (EPFL), University of Toronto

Career Start Year 2004

Number of shared co-authors 2

Eran Stark

Tel Aviv University

Career Start Year 2003

Number of shared co-authors 0

Nathan W Gouwens

Allen Institute for Brain Science

Career Start Year 2003

Number of shared co-authors 1

Benjamin R Arenkiel

Baylor College of Medicine

Career Start Year 2003

Number of shared co-authors 0

Edward S Boyden

McGovern Institute for Brain Research

Career Start Year 2003

Number of shared co-authors 0

Simon J B Butt

University of Oxford

Career Start Year 2002

Number of shared co-authors 0

Natalia V De Marco Garc??a

Center for Neurogenetics, Brain and Mind Research Institute

Career Start Year 2002

Number of shared co-authors 0

Eran A Mukamel

University of California San Diego

Career Start Year 2002

Number of shared co-authors 1

Pamela M Baker

Allen Institute for Brain Science

Career Start Year 2002

Number of shared co-authors 1

Daniel K W??jcik

Nencki Institute

Career Start Year 2000

Number of shared co-authors 4

Anna Devor

Boston University

Career Start Year 2000

Number of shared co-authors 0

Jonathan E Rubin

Center for the Neural Basis of Cognition

Career Start Year 2000

Number of shared co-authors 0

Attila Losonczy

Columbia University, USA Mortimer B. Zuckerman Mind Brain Behavior Institute

Career Start Year 1999

Number of shared co-authors 0

Matthew A Smith

University of Pittsburgh

Career Start Year 1998

Number of shared co-authors 0

Jessica A Cardin

Kavli Institute for Neuroscience, Yale University School of Medicine

Career Start Year 1998

Number of shared co-authors 0

Giorgio A Ascoli

George Mason University

Career Start Year 1995

Number of shared co-authors 3

Paul Tiesinga

Radboud University Nijmegen

Career Start Year 1994

Number of shared co-authors 4

Hongkui Zeng

Allen Institute for Brain Science

Career Start Year 1994

Number of shared co-authors 1

Brett D Mensh

Howard Hughes Medical Institute

Career Start Year 1993

Number of shared co-authors 0

Carson C Chow

National Institute of Diabetes and Digestive and Kidney Diseases

Career Start Year 1992

Number of shared co-authors 0

Z Josh Huang

Duke University School of Medicine

Career Start Year 1991

Number of shared co-authors 0

Partha P Mitra

Center for Computational Brain Research, Indian Institute of Technology Madras

Career Start Year 1991

Number of shared co-authors 1

George Ermentrout

University of Pittsburgh

Career Start Year 1979

Number of shared co-authors 0

Arnold R Kriegstein

University of California san francisco

Career Start Year 1974

Number of shared co-authors 0

row(s) 1 - 30 of 30

David J Willshaw

Co-authored papers 4

Ari Ercole

University of Cambridge

Co-authored papers 4

Laurent Gatto

de Duve Institute, Universite catholique de Louvain

Co-authored papers 2

David B Goldstein

Institute for Genomic Medicine, Columbia University Irving Medical Center

Co-authored papers 1

Juan Antonio Vizca??no

EMBL-European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 1

Vanessa Sochat

Lawrence Livermore National Laboratory

Co-authored papers 1

Andrew S Allen

Duke University School of Medicine

Co-authored papers 1

Rui Wang

European Bioinformatics Institute (EMBL-EBI)

Co-authored papers 1

Christian Fufezan

Institute of Pharmacy and Molecular Biotechnology, Heidelberg University

Co-authored papers 1

Tom J Pollard

Massachusetts Institute of Technology, Scientific Data - Nature, Software Sustainability Institute, University College London, University of Law - London Bloomsbury Centre

Co-authored papers 1

Felipe da Veiga Leprevost

University of Michigan ann arbor

Co-authored papers 1

Robert M Flight

University of Kentucky

Co-authored papers 1

Alexander Konovalov

University of St Andrews

Co-authored papers 1

Thomas Wachtler

Ludwig-Maximilians-Universitat Munchen