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Author Details

Karl Mechtler
IMP-Institute of Molecular Pathology
1990
225
76
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36213965Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell-like Program Conserved in HPV-Positive Cancers.Cancer Discov2023
37566781MS Annika 2.0 Identifies Cross-Linked Peptides in MS2-MS3-Based Workflows at High Sensitivity and Specificity.J Proteome Res2023
38088903A High-Sensitivity Low-Nanoflow LC-MS Configuration for High-Throughput Sample-Limited Proteomics.Anal Chem2023
36989136Integrated transcriptome and proteome analysis reveals posttranscriptional regulation of ribosomal genes in human brain organoids.Elife2023
37013908Functionally distinct promoter classes initiate transcription via different mechanisms reflected in focused versus dispersed initiation patterns.EMBO J2023
37137875The Fgf/Erf/NCoR1/2 repressive axis controls trophoblast cell fate.Nat Commun2023
36914898TurboID-based proteomic profiling of meiotic chromosome axes in Arabidopsis thaliana.Nat Plants2023
36806919Label-free single cell proteomics utilizing ultrafast LC and MS instrumentation: A valuable complementary technique to multiplexing.Proteomics2023
36688604MS Ana: Improving Sensitivity in Peptide Identification with Spectral Library Search.J Proteome Res2023
36802514Robust and Easy-to-Use One-Pot Workflow for Label-Free Single-Cell Proteomics.Anal Chem2023
34492159GSK3-mediated phosphorylation of DEK3 regulates chromatin accessibility and stress tolerance in Arabidopsis.FEBS J2022
35803948Mimicked synthetic ribosomal protein complex for benchmarking crosslinking mass spectrometry workflows.Nat Commun2022
35650434Differential cofactor dependencies define distinct types of human enhancers.Nature2022
35472311Bacterial-type ferroxidase tunes iron-dependent phosphate sensing during Arabidopsis root development.Curr Biol2022
35576154Cryo-EM structure of the plant 26S proteasome.Plant Commun2022
36143426Urinary Collectrin (TMEM27) as Novel Marker for Acute Kidney Injury.Life (Basel)2022
36068014Deep Single-Shot NanoLC-MS Proteome Profiling with a 1500 Bar UHPLC System, Long Fully Porous Columns, and HRAM MS.J Proteome Res2022
36356180Deep Proteome Profiling with Reduced Carryover Using Superficially Porous Microfabricated nanoLC Columns.Anal Chem2022
34967612Quantitative Accuracy and Precision in Multiplexed Single-Cell Proteomics.Anal Chem2022
34793982Comparative Proteome Signatures of Trace Samples by Multiplexed Data-Independent Acquisition.Mol Cell Proteomics2022
33151691Cleavable Cross-Linkers and Mass Spectrometry for the Ultimate Task of Profiling Protein-Protein Interaction Networks <i>in Vivo</i>.J Proteome Res2021
33574069Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex.Genes Dev2021
33852321MS Annika: A New Cross-Linking Search Engine.J Proteome Res2021
33600438Zebrafish Ski7 tunes RNA levels during the oocyte-to-embryo transition.PLoS Genet2021
33759252MS Amanda 2.0: Advancements in the standalone implementation.Rapid Commun Mass Spectrom2021
34645873The expression, localisation and interactome of pigeon CRY2.Sci Rep2021
34667177PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC.Nat Commun2021
34507999MSX2 safeguards syncytiotrophoblast fate of human trophoblast stem cells.Proc Natl Acad Sci U S A2021
34711951AKIRIN2 controls the nuclear import of proteasomes in vertebrates.Nature2021
34009726Quality standards in proteomics research facilities: Common standards and quality procedures are essential for proteomics facilities and their users.EMBO Rep2021
34142657The linear ubiquitin chain assembly complex (LUBAC) generates heterotypic ubiquitin chains.Elife2021
34086674Crosstalk between H2A variant-specific modifications impacts vital cell functions.PLoS Genet2021
34308839Cdc4 phospho-degrons allow differential regulation of Ame1<sup>CENP-U</sup> protein stability across the cell cycle.Elife2021
34137250Ultrasensitive NanoLC-MS of Subnanogram Protein Samples Using Second Generation Micropillar Array LC Technology with Orbitrap Exploris 480 and FAIMS PRO.Anal Chem2021
32250121Fast and Highly Efficient Affinity Enrichment of Azide-A-DSBSO Cross-Linked Peptides.J Proteome Res2020
32029734A synthetic peptide library for benchmarking crosslinking-mass spectrometry search engines for proteins and protein complexes.Nat Commun2020
31805502AMPK leads to phosphorylation of the transcription factor Nrf2, tuning transactivation of selected target genes.Redox Biol2020
32065581ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesin<sup>STAG1</sup> from WAPL.Elife2020
33137126A proteomic survey of microtubule-associated proteins in a R402H TUBA1A mutant mouse.PLoS Genet2020
33026191LSD1 inhibition induces differentiation and cell death in Merkel cell carcinoma.EMBO Mol Med2020
33215740Site-specific ubiquitination of the E3 ligase HOIP regulates apoptosis and immune signaling.EMBO J2020
33065067Toward Increased Reliability, Transparency, and Accessibility in Cross-linking Mass Spectrometry.Structure2020
32851973A cross-kingdom conserved ER-phagy receptor maintains endoplasmic reticulum homeostasis during stress.Elife2020
32851187The biophysical, molecular, and anatomical landscape of pigeon CRY4: A candidate light-based quantal magnetosensor.Sci Adv2020
32732418ANGEL2 is a member of the CCR4 family of deadenylases with 2',3'-cyclic phosphatase activity.Science2020
30693776Optimized Fragmentation Improves the Identification of Peptides Cross-Linked by MS-Cleavable Reagents.J Proteome Res2019
31871840A novel approach to immunoapheresis of C3a/C3 and proteomic identification of associates.PeerJ2019
31384064The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation.Nat Struct Mol Biol2019
31204999Absolute quantification of cohesin, CTCF and their regulators in human cells.Elife2019
31592189Structural analysis of urinary light chains and proteomic analysis of hyaline tubular casts in light chain associated kidney disorders.PeerJ2019
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Collaborators

Max Planck Institute of Molecular Cell Biology and Genetics
Co-authored papers 8
Center for Structural Mass Spectrometry, Martin Luther University Halle-Wittenberg
Co-authored papers 7
Max Planck Institute of Molecular Cell Biology and Genetics
Co-authored papers 7
Institute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA)
Co-authored papers 6
Utrecht University
Co-authored papers 5
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences
Co-authored papers 5
ETH Zurich
Co-authored papers 4
Child and Family Research Institute, University of British Columbia
Co-authored papers 4
University of California san francisco
Co-authored papers 4
University Hospital Carl Gustav Carus, Technische Universitat (TU) Dresden
Co-authored papers 4
Co-authored papers 4
Institute of Child Health and Human Development
Co-authored papers 3
Institute of Life Science, Kurume University
Co-authored papers 3
Institute for Bioanalysis, Coburg University of Applied Sciences and Arts
Co-authored papers 3
Utrecht Institute for Pharmaceutical Sciences, Utrecht University
Co-authored papers 3
EMBL-European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 3
University of Cambridge
Co-authored papers 2
Max Planck Institute for Developmental Biology
Co-authored papers 2
Memorial Sloan-Kettering Cancer Center
Co-authored papers 2
Institute of Life Sciences, The Hebrew University
Co-authored papers 2
Institute of Microbiology of the CAS
Co-authored papers 2
University of Cambridge
Co-authored papers 2
Max Planck Institute for Medical Research
Co-authored papers 2
Institute for Biotechnology, Technical University Berlin
Co-authored papers 2
European Bioinformatics Institute
Co-authored papers 2
Institute for Systems Biology
Co-authored papers 2
Johannes Gutenberg University Mainz
Co-authored papers 2
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 2
and Pharmacy, Freie Universitat Berlin
Co-authored papers 2
McGill University
Co-authored papers 2