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Author Details

Alun Thomas
University of Utah School of Medicine
1986
130
31
PMIDPaper TitleJournal TitlePublished Year
36640362Random allelic expression in the adult human body.Cell Rep2023
37579253Germline <i>EGFR</i> Mutations and Familial Lung Cancer.J Clin Oncol2023
34953562Evidence for excess familial clustering of Post Traumatic Stress Disorder in the US Veterans Genealogy resource.J Psychiatr Res2022
35659930Comprehensive evaluation and efficient classification of BRCA1 RING domain missense substitutions.Am J Hum Genet2022
34298235Detection of circulating tumor DNA without a tumor-informed search using next-generation sequencing is a prognostic biomarker in pancreatic ductal adenocarcinoma.Neoplasia2021
33720369Association Between Contact Precautions and Transmission of Methicillin-Resistant Staphylococcus aureus in Veterans Affairs Hospitals.JAMA Netw Open2021
33512528Effectiveness of Contact Precautions to Prevent Transmission of Methicillin-Resistant Staphylococcus aureus and Vancomycin-Resistant Enterococci in Intensive Care Units.Clin Infect Dis2021
33512524Transmission Dynamics of Clostridioides difficile in 2 High-Acuity Hospital Units.Clin Infect Dis2021
32756956Peri-implantation intercourse does not lower fecundability.Hum Reprod2020
32084206The stochastic nature of errors in next-generation sequencing of circulating cell-free DNA.PLoS One2020
31171468Variation and trends in transmission dynamics of Methicillin-resistant Staphylococcus aureus in veterans affairs hospitals and nursing homes.Epidemics2019
29040678Extended models for nosocomial infection: parameter estimation and model selection.Math Med Biol2018
30044795Automated size selection for short cell-free DNA fragments enriches for circulating tumor DNA and improves error correction during next generation sequencing.PLoS One2018
30109265Population genealogy resource shows evidence of familial clustering for Alzheimer disease.Neurol Genet2018
29389935Novel pedigree analysis implicates DNA repair and chromatin remodeling in multiple myeloma risk.PLoS Genet2018
29659923A Nonsynonymous Variant in the GOLM1 Gene in Cutaneous Malignant Melanoma.J Natl Cancer Inst2018
29650789Reparameterization of PAM50 Expression Identifies Novel Breast Tumor Dimensions and Leads to Discovery of a Genome-Wide Significant Breast Cancer Locus at <i>12q15</i>.Cancer Epidemiol Biomarkers Prev2018
28772302Cancer Risk in Families Fulfilling the Amsterdam Criteria for Lynch Syndrome.JAMA Oncol2017
28702465A Dynamic Transmission Model to Evaluate the Effectiveness of Infection Control Strategies.Open Forum Infect Dis2017
27262462Genome-wide association of familial prostate cancer cases identifies evidence for a rare segregating haplotype at 8q24.21.Hum Genet2016
24114068Efficient parameter estimation for models of healthcare-associated pathogen transmission in discrete and continuous time.Math Med Biol2015
23873442Improved hidden Markov model for nosocomial infections.Math Med Biol2014
27081513Cold sore susceptibility gene-1 genotypes affect the expression of herpes labialis in unrelated human subjects.Hum Genome Var2014
24796687Identification of specific Y chromosomes associated with increased prostate cancer risk.Prostate2014
22951724Linkage analysis of extended high-risk pedigrees replicates a cutaneous malignant melanoma predisposition locus on chromosome 9q21.J Invest Dermatol2013
23666360Fine mapping of the Bmgr5 quantitative trait locus for allogeneic bone marrow engraftment in mice.Immunogenetics2013
23626600Employing MCMC under the PPL framework to analyze sequence data in large pedigrees.Front Genet2013
23703256Pathways analysis of differential gene expression induced by engrafting doses of total body irradiation for allogeneic bone marrow transplantation in mice.Immunogenetics2013
23328892Creation of a national resource with linked genealogy and phenotypic data: the Veterans Genealogy Project.Genet Med2013
22949387Calibration of multiple in silico tools for predicting pathogenicity of mismatch repair gene missense substitutions.Hum Mutat2013
21706340A unique genome-wide association analysis in extended Utah high-risk pedigrees identifies a novel melanoma risk variant on chromosome arm 10q.Hum Genet2012
23190577Pairwise shared genomic segment analysis in three Utah high-risk breast cancer pedigrees.BMC Genomics2012
22989048Shared genomic segment analysis: the power to find rare disease variants.Ann Hum Genet2012
21926112Evaluation of record linkage between a large healthcare provider and the Utah Population Database.J Am Med Inform Assoc2012
21244692Rare, evolutionarily unlikely missense substitutions in CHEK2 contribute to breast cancer susceptibility: results from a breast cancer family registry case-control mutation-screening study.Breast Cancer Res2011
22373360Case-control association testing by graphical modeling for the Genetic Analysis Workshop 17 mini-exome sequence data.BMC Proc2011
22373325Identifying rare variants from exome scans: the GAW17 experience.BMC Proc2011
22373081Pairwise shared genomic segment analysis in high-risk pedigrees: application to Genetic Analysis Workshop 17 exome-sequencing SNP data.BMC Proc2011
22189468Detecting pleiotropy and epistasis using variance components linkage analysis in jPAP.Hum Hered2011
22128051Effect of linkage disequilibrium on the identification of functional variants.Genet Epidemiol2011
21291415Accuracy and computational efficiency of a graphical modeling approach to linkage disequilibrium estimation.Stat Appl Genet Mol Biol2011
21283087Tests of association for rare variants: case control mutation screening.Nat Rev Genet2011
21304558Identification of regions of positive selection using Shared Genomic Segment analysis.Eur J Hum Genet2011
21076150Automated construction and testing of multi-locus gene-gene associations.Bioinformatics2011
19683070Extending the Fellegi-Sunter probabilistic record linkage method for approximate field comparators.J Biomed Inform2010
21143908Haplotype association analyses in resources of mixed structure using Monte Carlo testing.BMC Bioinformatics2010
20841858The impact of a growing minority population on identification of duplicate records in an enterprise data warehouse.Stud Health Technol Inform2010
20413977An application of the latent p value method to assess linkage in asthma pedigrees.Hum Hered2010
19942608The conditional independences between variables derived from two independent identically distributed Markov random fields when pairwise order is ignored.Math Med Biol2010
19582786Assessment of SNP streak statistics using gene drop simulation with linkage disequilibrium.Genet Epidemiol2010
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Collaborators

David E Goldgar
University of Utah
Co-authored papers 5
Scott L DuVall
University of Utah
Co-authored papers 3
Andrew Redd
University of Utah School of Medicine
Co-authored papers 3
David A Nix
Co-authored papers 3
Russell Bell
Huntsman Cancer Institute at the University of Utah
Co-authored papers 3
Barbara L Weber
Basser Center for BRCA, Abramson Cancer Center, University of Pennsylvania
Co-authored papers 2
Spencer S Jones
Tenet Healthcare Corporation
Co-authored papers 2
R Scott Evans
University of Utah
Co-authored papers 2
Arnold Oliphant
University of Utah Medical Center
Co-authored papers 2
Irene L Andrulis
University of Toronto
Co-authored papers 2
Jeff Stevens
Co-authored papers 2
Peter J Haug
Intermountain Healthcare & University of Utah
Co-authored papers 2
Andrew D Paterson
The Hospital for Sick Children
Co-authored papers 2
Hilary Coon
Co-authored papers 2
Alexander Kamb
Inc. 30301 Agoura Rd.
Co-authored papers 2
Judy E Garber
Dana-Farber Cancer Institute
Co-authored papers 2
Esther M John
Co-authored papers 2
Gerald B Christensen
Co-authored papers 2
Benjamin D Horne
Co-authored papers 2
Johanna M Rommens
The Hospital for Sick Children
Co-authored papers 2
Nathan Pankratz
University of Minnesota
Co-authored papers 1
Shamil R Sunyaev
Harvard Medical School
Co-authored papers 1
Keyan Zhao
Co-authored papers 1
Qiong Yang
Co-authored papers 1
Inke R König
Co-authored papers 1
Xiaofeng Zhu
Co-authored papers 1
Louise C Strong
University of Texas MD Anderson Cancer Center
Co-authored papers 1
Yungui Huang
Research Institute at Nationwide Childrens Hospital, University of Iowa
Co-authored papers 1
Peter J Oefner
Institute of Functional Genomics, University of Regensburg
Co-authored papers 1
Amanda B Spurdle
QIMR Berghofer Medical Research Institute
Co-authored papers 1
Release 1.2