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Author Details

Tobias Rausch
University of Heidelberg
2008
57
32
Antoine Forget (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36424487Functional analysis of structural variants in single cells using Strand-seq.Nat Biotechnol2023
36849559Author Correction: The NSL complex maintains nuclear architecture stability via lamin A/C acetylation.Nat Cell Biol2023
34875027Constitutional PIGA mutations cause a novel subtype of hemochromatosis in patients with neurologic dysfunction.Blood2022
35384272Neutralizing antibody response against the B.1.617.2 (delta) and the B.1.1.529 (omicron) variants after a third mRNA SARS-CoV-2 vaccine dose in kidney transplant recipients.Am J Transplant2022
35585141Pediatric T-ALL type-1 and type-2 relapses develop along distinct pathways of clonal evolution.Leukemia2022
35410384Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes.Nat Genet2022
34039950Genomic insights into the pathogenesis of Epstein-Barr virus-associated diffuse large B-cell lymphoma by whole-genome and targeted amplicon sequencing.Blood Cancer J2021
33632895Haplotype-resolved diverse human genomes and integrated analysis of structural variation.Science2021
34945722Evidence for the Association between the Intronic Haplotypes of Ionotropic Glutamate Receptors and First-Episode Schizophrenia.J Pers Med2021
34328665Metagenomic analysis of primary colorectal carcinomas and their metastases identifies potential microbial risk factors.Mol Oncol2021
31589307VISOR: a versatile haplotype-aware structural variant simulator for short- and long-read sequencing.Bioinformatics2020
31873213Single-cell analysis of structural variations and complex rearrangements with tri-channel processing.Nat Biotechnol2020
33034633TRiCoLOR: tandem repeat profiling using whole-genome long-read sequencing data.Gigascience2020
32755029Chromatin accessibility landscape of pediatric T-lymphoblastic leukemia and human T-cell precursors.EMBO Mol Med2020
32171249Tracy: basecalling, alignment, assembly and deconvolution of sanger chromatogram trace files.BMC Genomics2020
32296180Germline Elongator mutations in Sonic Hedgehog medulloblastoma.Nature2020
30520945Alfred: interactive multi-sample BAM alignment statistics, feature counting and feature annotation for long- and short-read sequencing.Bioinformatics2019
31802000The molecular landscape of ETMR at diagnosis and relapse.Nature2019
31685959A highly soluble Sleeping Beauty transposase improves control of gene insertion.Nat Biotechnol2019
30213827<i>JUNB</i>, <i>DUSP2</i>, <i>SGK1</i>, <i>SOCS1</i> and <i>CREBBP</i> are frequently mutated in T-cell/histiocyte-rich large B-cell lymphoma.Haematologica2019
31576060The NSL complex maintains nuclear architecture stability via lamin A/C acetylation.Nat Cell Biol2019
30709874Missense variants in NOX1 and p22phox in a case of very-early-onset inflammatory bowel disease are functionally linked to NOD2.Cold Spring Harb Mol Case Stud2019
29138229Genomic structural variations lead to dysregulation of important coding and non-coding RNA species in dilated cardiomyopathy.EMBO Mol Med2018
29940847ToTem: a tool for variant calling pipeline optimization.BMC Bioinformatics2018
30389682PDX models recapitulate the genetic and epigenetic landscape of pediatric T-cell leukemia.EMBO Mol Med2018
29753700Spectrum and prevalence of genetic predisposition in medulloblastoma: a retrospective genetic study and prospective validation in a clinical trial cohort.Lancet Oncol2018
29301499Coordinated expression and genetic polymorphisms in Grainyhead-like genes in human non-melanoma skin cancers.BMC Cancer2018
28543713Potential protective role of Grainyhead-like genes in the development of clear cell renal cell carcinoma.Mol Carcinog2017
28157215Identification of a genetically defined ultra-high-risk group in relapsed pediatric T-lymphoblastic leukemia.Blood Cancer J2017
28145886Identification of novel follicular dendritic cell sarcoma markers, FDCSP and SRGN, by whole transcriptome sequencing.Oncotarget2017
28749451Characterization of Two Historic Smallpox Specimens from a Czech Museum.Viruses2017
26615982MCM3AP and POMP Mutations Cause a DNA-Repair and DNA-Damage-Signaling Defect in an Immunodeficient Child.Hum Mutat2016
26658840Highly recurrent mutations of SGK1, DUSP2 and JUNB in nodular lymphocyte predominant Hodgkin lymphoma.Leukemia2016
26108880Identification of cytokine-induced modulation of microRNA expression and secretion as measured by a novel microRNA specific qPCR assay.Sci Rep2015
26546739A novel autosomal recessive TERT T1129P mutation in a dyskeratosis congenita family leads to cellular senescence and loss of CD34+ hematopoietic stem cells not reversible by mTOR-inhibition.Aging (Albany NY)2015
26432246An integrated map of structural variation in 2,504 human genomes.Nature2015
26294725Pediatric T-cell lymphoblastic leukemia evolves into relapse by clonal selection, acquisition of mutations and promoter hypomethylation.Haematologica2015
26121404Assembly and diploid architecture of an individual human genome via single-molecule technologies.Nat Methods2015
24306027Identification of novel sequence variations in microRNAs in chronic lymphocytic leukemia.Carcinogenesis2014
24972766The activating STAT5B N642H mutation is a common abnormality in pediatric T-cell acute lymphoblastic leukemia and confers a higher risk of relapse.Haematologica2014
24651015Genome sequencing of SHH medulloblastoma predicts genotype-related response to smoothened inhibition.Cancer Cell2014
23222910Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing.Genome Res2013
23665482Identification of a Ninein (NIN) mutation in a family with spondyloepimetaphyseal dysplasia with joint laxity (leptodactylic type)-like phenotype.Matrix Biol2013
23410972Integrative genomic analyses reveal an androgen-driven somatic alteration landscape in early-onset prostate cancer.Cancer Cell2013
23550136The genomic and transcriptomic landscape of a HeLa cell line.G3 (Bethesda)2013
23561803Whole-exome sequencing links caspase recruitment domain 11 (CARD11) inactivation to severe combined immunodeficiency.J Allergy Clin Immunol2013
22286061Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma.Nature2012
22962449DELLY: structural variant discovery by integrated paired-end and split-read analysis.Bioinformatics2012
23143595Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing.Nat Genet2012
22832583Dissecting the genomic complexity underlying medulloblastoma.Nature2012
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Collaborators

European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 36
Co-authored papers 15
St. Anna Children's Cancer Research Institute (CCRI)
Co-authored papers 14
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 8
German Cancer Research Center (DKFZ)
Co-authored papers 8
Institute of Pathology, University Hospital Heidelberg
Co-authored papers 7
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 7
Hopp Children's Cancer Center (KiTZ)
Co-authored papers 7
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 6
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 6
Berlin Institute of Health (BIH) and Charite
Co-authored papers 6
McGill University Health Centre (MUHC), Montreal Children's Hospital (MCH)
Co-authored papers 6
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 6
N.N. Burdenko Neurosurgical Institute
Co-authored papers 6
Co-authored papers 6
German Cancer Research Center (DKFZ)
Co-authored papers 5
Co-authored papers 5
The Hospital for Sick Children
Co-authored papers 5
St Jude Children's Research Hospital
Co-authored papers 5
University of California san francisco
Co-authored papers 5
Hopp Children's Cancer Center Heidelberg (KiTZ)
Co-authored papers 5
Co-authored papers 5
German Cancer Research Center (DKFZ)
Co-authored papers 5
University of Copenhagen
Co-authored papers 5
Co-authored papers 5
and Clinical Immunology, Heinrich Heine University, University Hospital Dusseldorf
Co-authored papers 5
University of Washington
Co-authored papers 4
Center for Digital Medicine, Heinrich Heine University Dusseldorf
Co-authored papers 4
Institut fur Informatik, Freie Universitat Berlin
Co-authored papers 4
Co-authored papers 4