Author details

Full Name

Gary P Schroth

Affiliation

ORCID

Career Start Year

1989

Papers

125

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37202906	Benchmarking blood collection tubes and processing intervals for extracellular vesicle performance metrics.		2023
37864136	Rational probe design for efficient rRNA depletion and improved metatranscriptomic analysis of human microbiomes.		2023
35084109	Endotype reversal as a novel strategy for screening drugs targeting familial Alzheimer's disease.	Alzheimers Dement	2022
36042219	Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy.	Nat Commun	2022
36232302	mRNA Capture Sequencing and RT-qPCR for the Detection of Pathognomonic, Novel, and Secondary Fusion Transcripts in FFPE Tissue: A Sarcoma Showcase.	International Journal of Molecular Sciences	2022
34980216	Assessing reproducibility of inherited variants detected with short-read whole genome sequencing.	Genome Biol	2022
34635840	Author Correction: Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study.	Nat Biotechnol	2021
33468686	Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants.	mBio	2021
33937877	Messenger RNA capture sequencing of extracellular RNA from human biofluids using a comprehensive set of spike-in controls.	STAR Protocols	2021
34140680	The RNA Atlas expands the catalog of human non-coding RNAs.	Nat Biotechnol	2021
34183863	Publisher Correction: The RNA Atlas expands the catalog of human non-coding RNAs.	Nat Biotechnol	2021
34504347	Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing.	Nat Biotechnol	2021
34504351	Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study.	Nat Biotechnol	2021
34504346	Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing.	Nat Biotechnol	2021
34696495	High-Throughput Next-Generation Sequencing Respiratory Viral Panel: A Diagnostic and Epidemiologic Tool for SARS-CoV-2 and Other Viruses.	Viruses	2021
33188013	Dedifferentiation and neuronal repression define familial Alzheimer's disease.	Sci Adv	2020
32015550	Author Correction: Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells.	Nat Biotechnol	2020
32111915	Integrated RNA and metabolite profiling of urine liquid biopsies for prostate cancer biomarker discovery.	Sci Rep	2020
32766602	High-throughput SARS-CoV-2 and host genome sequencing from single nasopharyngeal swabs.	medRxiv	2020
31000464	Medical countermeasures during the 2018 Ebola virus disease outbreak in the North Kivu and Ituri Provinces of the Democratic Republic of the Congo: a rapid genomic assessment.	Lancet Infect Dis	2019
30808306	Enrichment post-library preparation enhances the sensitivity of high-throughput sequencing-based detection and characterization of viruses from complex samples.	BMC Genomics	2019
31000465	2018 Ebola virus disease outbreak in Ã¿quateur Province, Democratic Republic of the Congo: a retrospective genomic characterisation.	Lancet Infect Dis	2019
29703817	Comprehensive viral enrichment enables sensitive respiratory virus genomic identification and analysis by next generation sequencing.	Genome Research	2018
30285621	Bead-linked transposomes enable a normalization-free workflow for NGS library preparation.	BMC Genomics	2018
30128994	Targeted Sequencing of Respiratory Viruses in Clinical Specimens for Pathogen Identification and Genome-Wide Analysis.	Methods in Molecular Biology	2018
29565360	Corrigendum: Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.	Nature	2018
27704585	Complete genome sequence of a KI polyomavirus isolated from an otherwise healthy child with severe lower respiratory tract infection.	Journal of Medical Virology	2017
28640357	RNA sequencing of esophageal adenocarcinomas identifies novel fusion transcripts, including NPC1-MELK, arising from a complex chromosomal rearrangement.	Cancer	2017
27411634	Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.	Nature	2016
27151782	Complete Genome Sequence of a Novel Human WU Polyomavirus Isolate Associated with Acute Respiratory Infection.	Genome Announcements	2016
27386513	Reduced evolutionary rate in reemerged Ebola virus transmission chains.	Sci Adv	2016
26149387	LIN28A Modulates Splicing and Gene Expression Programs in Breast Cancer Cells.	Mol Cell Biol	2015
25621511	Plasticity of DNA methylation in a nerve injury model of pain.	Epigenetics	2015
25575081	Single-cell transcriptome analysis reveals dynamic changes in lncRNA expression during reprogramming.	Cell Stem Cell	2015
25392405	Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR).	Nucleic Acids Res	2015
26182240	Quantitative assessment of RNA-protein interactions with high-throughput sequencing-RNA affinity profiling.		2015
26087898	Exome-level comparison of primary well-differentiated neuroendocrine tumors and their cell lines.	Cancer genetics	2015
26465384	Molecular Evidence of Sexual Transmission of Ebola Virus.	N Engl J Med	2015
26377836	The genome of the vervet (Chlorocebus aethiops sabaeus).	Genome Res	2015
25164601	Sequencing of Charcot-Marie-Tooth disease genes in a toxic polyneuropathy.	Ann Neurol	2014
24310002	Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells.	Genome Res	2014
24299736	From single-cell to cell-pool transcriptomes: stochasticity in gene expression and RNA splicing.	Genome Res	2014
24810475	Assessment and improvement of Indian-origin rhesus macaque and Mauritian-origin cynomolgus macaque genome annotations using deep transcriptome sequencing data.	J Med Primatol	2014
24809628	Comprehensive analysis of RNA-protein interactions by high-throughput sequencing-RNA affinity profiling.	Nature Methods	2014
24902603	Genomic profiling of collaborative cross founder mice infected with respiratory viruses reveals novel transcripts and infection-related strain-specific gene and isoform expression.	G3 (Bethesda)	2014
24973947	Evaluation of quantitative miRNA expression platforms in the microRNA quality control (miRQC) study.	Nat Methods	2014
25108381	Metagenomic shotgun sequencing of a Bunyavirus in wild-caught Aedes aegypti from Thailand informs the evolutionary and genomic history of the Phleboviruses.	Virology	2014
24922324	Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts.	RNA Biol	2014
23203872	The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics.	Nucleic Acids Res	2013
23824657	A mutation in TGFB3 associated with a syndrome of low muscle mass, growth retardation, distal arthrogryposis and clinical features overlapping with Marfan and Loeys-Dietz syndrome.	Am J Med Genet A	2013