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Author Details

Henrik J Johansson
Karolinska Institutet
2005
58
33
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37591242FBXL12 degrades FANCD2 to regulate replication recovery and promote cancer cell survival under conditions of replication stress.Mol Cell2023
36923555Proteome Analysis of Pancreatic Tumors Implicates Extracellular Matrix in Patient Outcome.Cancer Res Commun2022
34066041Correcting for Naturally Occurring Mass Isotopologue Abundances in Stable-Isotope Tracing Experiments with PolyMID.Metabolites2021
34870237Proteogenomics of non-small cell lung cancer reveals molecular subtypes associated with specific therapeutic targets and immune evasion mechanisms.Nat Cancer2021
34737229Reprogrammed transsulfuration promotes basal-like breast tumor progression via realigning cellular cysteine persulfidation.Proc Natl Acad Sci U S A2021
34721051Fine Tuning of Phosphorothioate Inclusion in 2'-O-Methyl Oligonucleotides Contributes to Specific Cell Targeting for Splice-Switching Modulation.Front Physiol2021
32234966Immediate Adaptation Analysis Implicates BCL6 as an EGFR-TKI Combination Therapy Target in NSCLC.Mol Cell Proteomics2020
32628111PTEN and DNA-PK determine sensitivity and recovery in response to WEE1 inhibition in human breast cancer.Elife2020
32994316Mutation-independent Proteomic Signatures of Pathological Progression in Murine Models of Duchenne Muscular Dystrophy.Mol Cell Proteomics2020
32847508Combined transcriptome and proteome profiling of the pancreatic β-cell response to palmitate unveils key pathways of β-cell lipotoxicity.BMC Genomics2020
32205417DEqMS: A Method for Accurate Variance Estimation in Differential Protein Expression Analysis.Mol Cell Proteomics2020
30962452Breast cancer quantitative proteome and proteogenomic landscape.Nat Commun2019
31670074MYCN-enhanced Oxidative and Glycolytic Metabolism Reveals Vulnerabilities for Targeting Neuroblastoma.iScience2019
31680809Considerations and Implications in the Purification of Extracellular Vesicles - A Cautionary Tale.Front Neurosci2019
31611586Author Correction: Extracellular nanovesicles released from the commensal yeast Malassezia sympodialis are enriched in allergens and interact with cells in human skin.Sci Rep2019
29739940Publisher Correction: Discovery of coding regions in the human genome by integrated proteogenomics analysis workflow.Nat Commun2018
30018314Heterogeneity and interplay of the extracellular vesicle small RNA transcriptome and proteome.Sci Rep2018
29907748Extracellular nanovesicles released from the commensal yeast Malassezia sympodialis are enriched in allergens and interact with cells in human skin.Sci Rep2018
29730990Time-resolved transcriptome and proteome landscape of human regulatory T cell (Treg) differentiation reveals novel regulators of FOXP3.BMC Biol2018
29500430Discovery of coding regions in the human genome by integrated proteogenomics analysis workflow.Nat Commun2018
29374092<i>MYCN</i>-amplified neuroblastoma maintains an aggressive and undifferentiated phenotype by deregulation of estrogen and NGF signaling.Proc Natl Acad Sci U S A2018
29100370Identification of the PAK4 interactome reveals PAK4 phosphorylation of N-WASP and promotion of Arp2/3-dependent actin polymerization.Oncotarget2017
29133847Female mice lacking Pald1 exhibit endothelial cell apoptosis and emphysema.Sci Rep2017
26782178Comprehensive Proteomic Analysis of Mesenchymal Stem Cell Exosomes Reveals Modulation of Angiogenesis via Nuclear Factor-KappaB Signaling.Stem Cells2016
27221332In Vivo Effects of Mesenchymal Stromal Cells in Two Patients With Severe Acute Respiratory Distress Syndrome.Stem Cells Transl Med2016
26931825Cells release subpopulations of exosomes with distinct molecular and biological properties.Sci Rep2016
25659648Ultrafiltration with size-exclusion liquid chromatography for high yield isolation of extracellular vesicles preserving intact biophysical and functional properties.Nanomedicine2015
26385637Multi-level omics analysis in a murine model of dystrophin loss and therapeutic restoration.Hum Mol Genet2015
26285659In Vivo Effects of Mesenchymal Stromal Cells in Two Patients With Severe Acute Respiratory Distress Syndrome.Stem Cells Transl Med2015
25878567Proteomics profiling identify CAPS as a potential predictive marker of tamoxifen resistance in estrogen receptor positive breast cancer.Clin Proteomics2015
26022510Serum-free culture alters the quantity and protein composition of neuroblastoma-derived extracellular vesicles.J Extracell Vesicles2015
24240322HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics.Nat Methods2014
25231543Investigating the applicability of antibodies generated within the human protein atlas as capture agents in immunoenrichment coupled to mass spectrometry.J Proteome Res2014
24722731Immunoproteomics using polyclonal antibodies and stable isotope-labeled affinity-purified recombinant proteins.Mol Cell Proteomics2014
24361865Proteome screening of pleural effusions identifies galectin 1 as a diagnostic biomarker and highlights several prognostic biomarkers for malignant mesothelioma.Mol Cell Proteomics2014
24498411Differentially expressed proteins in malignant and benign adrenocortical tumors.PLoS One2014
23341551Genomic insights into the atopic eczema-associated skin commensal yeast Malassezia sympodialis.mBio2013
24151238Selectivity analysis of single binder assays used in plasma protein profiling.Proteomics2013
23868472Retinoic acid receptor alpha is associated with tamoxifen resistance in breast cancer.Nat Commun2013
23471484Defining, comparing, and improving iTRAQ quantification in mass spectrometry proteomics data.Mol Cell Proteomics2013
22189689Thapsigargin down-regulates protein levels of GRP78/BiP in INS-1E cells.J Cell Biochem2012
21245043Design of a peptide-based vector, PepFect6, for efficient delivery of siRNA in cell culture and systemically in vivo.Nucleic Acids Res2011
21734112Enhanced information output from shotgun proteomics data by protein quantification and peptide quality control (PQPQ).Mol Cell Proteomics2011
21674665Penicillin-binding protein 5 can form a homo-oligomeric complex in the inner membrane of Escherichia coli.Protein Sci2011
21053134Mimicry of protein function with cell-penetrating peptides.Methods Mol Biol2011
19105971A stearylated CPP for delivery of splice correcting oligonucleotides using a non-covalent co-incubation strategy.J Control Release2009
18180292c-Jun supports ribosomal RNA processing and nucleolar localization of RNA helicase DDX21.J Biol Chem2008
28192705Characterization of a Novel Cytotoxic Cell-penetrating Peptide Derived From p14ARF Protein.Mol Ther2008
19012426Distinct uptake routes of cell-penetrating peptide conjugates.Bioconjug Chem2008
18683276Cholesterol prevents interaction of the cell-penetrating peptide transportan with model lipid membranes.J Pept Sci2008
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Collaborators

Karolinska Institutet
Co-authored papers 41
Stockholm University
Co-authored papers 4
KTH Royal Institute of Technology
Co-authored papers 3
Co-authored papers 2
University of Oslo
Co-authored papers 2
Institute for Cancer Research, Oslo University Hospital
Co-authored papers 2
Albanova University Center , KTH-Royal Institute of Technology
Co-authored papers 2
Sahlgrenska University Hospital
Co-authored papers 2
KTH Royal Institute of Technology
Co-authored papers 2
Stockholm University
Co-authored papers 1
Royal Institute of Technology, Karolinska Institutet
Co-authored papers 1
Knight Cancer Institute, Oregon Health and Sciences University
Co-authored papers 1
Co-authored papers 1
Faculty of Clinical Medicine, University of Oslo
Co-authored papers 1
KTH Royal Institute of Technology
Co-authored papers 1
Heidelberg University
Co-authored papers 1
Lund University
Co-authored papers 1
University of California-Riverside
Co-authored papers 1
Universitat Pompeu Fabra
Co-authored papers 1
Linkoping University
Co-authored papers 1
Co-authored papers 1
Max Planck Institute for Multidisciplinary Sciences
Co-authored papers 1
Institute of Experimental Genetics, German Mouse Clinic
Co-authored papers 1
Institute for Immunology, Biomedical Center (BMC)
Co-authored papers 1
Co-authored papers 1
German Center for Diabetes Research (DZD e.V.)
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
The Royal Institute of Technology (KTH)
Co-authored papers 1
Institute of Experimental Genetics, German Mouse Clinic
Co-authored papers 1