Author details

Full Name

Alex R Hastie

Affiliation

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36671517	Genetic Predisposition to Neurological Complications in Patients with COVID-19.	Biomolecules	2023
36208288	A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.).	DNA Res	2023
37761823	Optical Genome Mapping: Integrating Structural Variations for Precise Homologous Recombination Deficiency Score Calculation.		2023
37895217	Comparative Benchmarking of Optical Genome Mapping and Chromosomal Microarray Reveals High Technological Concordance in CNV Identification and Additional Structural Variant Refinement.		2023
37888957	Optical Genome Mapping for Oncology Applications.		2023
37962549	Correction: Optical Genome Mapping for Oncology Applications.		2023
36758723	Clinical Validation and Diagnostic Utility of Optical Genome Mapping in Prenatal Diagnostic Testing.		2023
37249392	Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (Mustela nigripes).		2023
37370824	Clinical Utility of Optical Genome Mapping and 523-Gene Next Generation Sequencing Panel for Comprehensive Evaluation of Myeloid Cancers.		2023
34911816	Constitutional chromothripsis of the locus as a cause of genetic predisposition to colon cancer.	Journal of Medical Genetics	2022
35456449	Optical Genome Mapping and Single Nucleotide Polymorphism Microarray: An Integrated Approach for Investigating Products of Conception.	Genes	2022
35388186	16p13.11p11.2 triplication syndrome: a new recognizable genomic disorder characterized by optical genome mapping and whole genome sequencing.	European Journal of Human Genetics	2022
36152629	Tissue- and cell-type-specific molecular and functional signatures of 16p11.2 reciprocal genomic disorder across mouse brain and human neuronal models.	Am J Hum Genet	2022
36265723	Clinical Validation and Diagnostic Utility of Optical Genome Mapping for Enhanced Cytogenomic Analysis of Hematological Neoplasms.	Journal of Molecular Diagnostics	2022
36514120	Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies.	Genome Biol	2022
35036860	Optical genome mapping identifies rare structural variations as predisposition factors associated with severe COVID-19.	iScience	2022
33670576	Identification of Somatic Structural Variants in Solid Tumors by Optical Genome Mapping.	Journal of Personalized Medicine	2021
36777713	Population genomics of the critically endangered kÄkÄpÅ.	Cell Genom	2021
33911273	Towards complete and error-free genome assemblies of all vertebrate species.	Nature	2021
33799648	Optical Genome Mapping as a Next-Generation Cytogenomic Tool for Detection of Structural and Copy Number Variations for Prenatal Genomic Analyses.	Genes	2021
33632895	Haplotype-resolved diverse human genomes and integrated analysis of structural variation.	Science	2021
33953399	A high-quality bonobo genome refines the analysis of hominid evolution.	Nature	2021
34157308	Genome-wide mapping of human DNA replication by optical replication mapping supports a stochastic model of eukaryotic replication.	Mol Cell	2021
32631951	Fully Phased Sequence of a Diploid Human Genome Determined <i>de Novo</i> from the DNA of a Single Individual.	G3 (Bethesda)	2020
32350247	Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle.	Nat Commun	2020
30833565	Genome maps across 26 human populations reveal population-specific patterns of structural variation.	Nat Commun	2019
30968363	Bionano Genome Mapping: High-Throughput, Ultra-Long Molecule Genome Analysis System for Precision Genome Assembly and Haploid-Resolved Structural Variation Discovery.	Advances in Experimental Medicine and Biology	2019
31433882	Construction and comparison of three reference-quality genome assemblies for soybean.	Plant J	2019
30846530	Long-read single-molecule maps of the functional methylome.	Genome Res	2019
29795340	Author Correction: The axolotl genome and the evolution of key tissue formation regulators.	Nature	2018
30306140	Emergency department checklist: an innovation to improve safety in emergency care.	BMJ Open Quality	2018
29880660	High-resolution comparative analysis of great ape genomes.	Science	2018
30256471	Discovery of multi-megabase polymorphic inversions by chromosome conformation capture sequencing in large-genome plant species.	Plant Journal	2018
30429615	Improved reference genome of Aedes aegypti informs arbovirus vector control.	Nature	2018
30039375	Structural Variation Detection and Analysis Using Bionano Optical Mapping.	Methods in Molecular Biology	2018
29364872	The axolotl genome and the evolution of key tissue formation regulators.	Nature	2018
28263316	Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome.	Nat Genet	2017
28605751	Improved maize reference genome with single-molecule technologies.	Nature	2017
28448065	Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.	Sci Data	2017
28447635	A chromosome conformation capture ordered sequence of the barley genome.	Nature	2017
27754575	Comprehensive definition of genome features in Spirodela polyrhiza by high-depth physical mapping and short-read DNA sequencing strategies.	Plant J	2017
27511170	Optical Nano-mapping and Analysis of Plant Genomes.	Methods in Molecular Biology	2016
26836631	Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius.	Nat Commun	2016
26801360	BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes.	Plant Biotechnology Journal	2016
27271295	Extensive sequencing of seven human genomes to characterize benchmark reference materials.	Sci Data	2016
26984673	Improvement of the banana "Musa acuminata" reference sequence using NGS data and semi-automated bioinformatics methods.	BMC Genomics	2016
27159086	A hybrid approach for de novo human genome sequence assembly and phasing.	Nat Methods	2016
26510793	Genome-Wide Structural Variation Detection by Genome Mapping on Nanochannel Arrays.	Genetics	2016
27706134	De novo assembly and phasing of a Korean human genome.	Nature	2016
26098870	Structural forms of the human amylase locus and their relationships to SNPs, haplotypes and obesity.	Nat Genet	2015