Author details

Full Name

Sophia Ananiadou

Affiliation

ORCID

Career Start Year

1991

Papers

123

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37326473	Continuous vs Intermittent Meropenem Administration in Critically Ill Patients With Sepsis: The MERCY Randomized Clinical Trial.	JAMA	2023
36395134	A Novel Automated Approach to Mutation-Cancer Relation Extraction by Incorporating Heterogeneous Knowledge.	IEEE Journal of Biomedical and Health Informatics	2023
37610905	Knowledge-enhanced Graph Topic Transformer for Explainable Biomedical Text Summarization.		2023
37030658	Contextualized medication event extraction with levitated markers.		2023
34636886	BioVAE: a pre-trained latent variable language model for biomedical text mining.		2022
35396451	Natural language processing applied to mental illness detection: a narrative review.	npj Digital Medicine	2022
35655127	Comparing neural models for nested and overlapping biomedical event detection.	BMC Bioinformatics	2022
35886395	A Narrative Literature Review of Natural Language Processing Applied to the Occupational Exposome.	International Journal of Environmental Research and Public Health	2022
36150046	Emotions and Topics Expressed on Twitter During the COVID-19 Pandemic in the United Kingdom: Comparative Geolocation and Text Mining Analysis.	Journal of Medical Internet Research	2022
34401381	Automatic identification of suicide notes with a transformer-based deep learning model.	Internet Interventions	2021
33684595	Continuous infusion versus intermittent administration of meropenem in critically ill patients (MERCY): A multicenter randomized double-blind trial. Rationale and design.	Contemporary Clinical Trials	2021
33980707	Teaching NeuroImage: Nitromethane-Induced Acute Reversible Encephalopathy.	Neurology	2021
34927002	A term-based and citation network-based search system for COVID-19.	JAMIA Open	2021
31197355	An ensemble of neural models for nested adverse drug events and medication extraction with subwords.	Journal of the American Medical Informatics Association : JAMIA	2020
31959923	The pace of modern culture.	Nat Hum Behav	2020
33087376	Women's health in <i>The BMJ</i>: a data science history.	BMJ Open	2020
33162674	Syntactically-informed word representations from graph neural network.	Neurocomputing	2020
31390003	Adverse drug events and medication relation extraction in electronic health records with ensemble deep learning methods.	Journal of the American Medical Informatics Association : JAMIA	2020
30782313	Hypothesis, analysis and synthesis, it's all Greek to me.	Elife	2019
31984360	Annotating and detecting phenotypic information for chronic obstructive pulmonary disease.	JAMIA Open	2019
31865903	Improving clinical named entity recognition in Chinese using the graphical and phonetic feature.	BMC Medical Informatics and Decision Making	2019
31805934	Improving reference prioritisation with PICO recognition.	BMC Medical Informatics and Decision Making	2019
30443819	A Text Mining Pipeline Using Active and Deep Learning Aimed at Curating Information in Computational Neuroscience.	Neuroinformatics	2019
30329013	Thalia: semantic search engine for biomedical abstracts.		2019
30646959	Machine learning algorithms for systematic review: reducing workload in a preclinical review of animal studies and reducing human screening error.	Systematic Reviews	2019
30700967	COPIOUS: A gold standard corpus of named entities towards extracting species occurrence from biodiversity literature.	Biodiversity Data Journal	2019
30739002	Non-invAsive VentIlation for early General wArd respiraTory failurE (NAVIGATE): A multicenter randomized controlled study. Protocol and statistical analysis plan.	Contemp Clin Trials	2019
31419946	Mapping anatomical related entities to human body parts based on wikipedia in discharge summaries.	BMC Bioinformatics	2019
30840055	Quantifying risk factors in medical reports with a context-aware linear model.	Journal of the American Medical Informatics Association : JAMIA	2019
29228271	LitPathExplorer: a confidence-based visual text analytics tool for exploring literature-enriched pathway models.		2018
28641245	Data Visualization with Structural Control of Global Cohort and Local Data Neighborhoods.		2018
30105604	Annotation and detection of drug effects in text for pharmacovigilance.	Journal of Cheminformatics	2018
29956486	Prioritising references for systematic reviews with RobotAnalyst: A user study.	Research Synthesis Methods	2018
29940927	Identification of research hypotheses and new knowledge from scientific literature.	BMC Medical Informatics and Decision Making	2018
29536603	Biosimilar vs originator insulins: Systematic review and meta-analysis.	Diabetes, Obesity and Metabolism	2018
29026002	Risk of bias reporting in the recent animal focal cerebral ischaemia literature.	Clinical Science	2017
28648605	A semi-supervised approach using label propagation to support citation screening.	Journal of Biomedical Informatics	2017
28948232	SciLite: a platform for displaying text-mined annotations as a means to link research articles with biological data.	Wellcome Open Res	2017
28414821	Constructing a biodiversity terminological inventory.	PLoS ONE	2017
28708831	biochem4j: Integrated and extensible biochemical knowledge through graph databases.	PLoS One	2017
29036627	Using uncertainty to link and rank evidence from biomedical literature for model curation.		2017
27589961	Overview of the interactive task in BioCreative V.	Database (Oxford)	2016
27293211	Topic detection using paragraph vectors to support active learning in systematic reviews.	Journal of Biomedical Informatics	2016
27189607	Argo: enabling the development of bespoke workflows and services for disease annotation.	Database : the journal of biological databases and curation	2016
26734936	Text Mining the History of Medicine.	PLoS ONE	2016
27363901	Analysis of the effect of sentiment analysis on extracting adverse drug reactions from tweets and forum posts.	J Biomed Inform	2016
27888231	Text mining resources for the life sciences.	Database : the journal of biological databases and curation	2016
27643689	Mapping Phenotypic Information in Heterogeneous Textual Sources to a Domain-Specific Terminological Resource.	PLoS ONE	2016
27589962	BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.	Database (Oxford)	2016
24907365	Event-based text mining for biology and functional genomics.	Brief Funct Genomics	2015