Author details

Full Name

Peer Bork

Affiliation

University of Wurzburg

ORCID

Career Start Year

1989

Papers

627

H Index

190

Expertise

CM4AI Collaborator

Emma Lundberg (CM4AI)

PMID	Paper Title	Journal Title	Published Year
38092943	High-throughput anaerobic screening for identifying compounds acting against gut bacteria in monocultures or communities.	Nat Protoc	2024
38092943	High-throughput anaerobic screening for identifying compounds acting against gut bacteria in monocultures or communities.	Nat Protoc	2024
37897342	SPIRE: a Searchable,Â Planetary-scale mIcrobiome REsource.	Nucleic Acids Res	2024
37897342	SPIRE: a Searchable,Â Planetary-scale mIcrobiome REsource.	Nucleic Acids Res	2024
36350672	InterPro in 2022.	Nucleic Acids Res	2023
36370105	The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest.	Nucleic Acids Res	2023
36350672	InterPro in 2022.	Nucleic Acids Res	2023
36408900	proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes.	Nucleic Acids Res	2023
36399505	eggNOG 6.0: enabling comparative genomics across 12Â 535 organisms.	Nucleic Acids Res	2023
37596349	Ocean-wide comparisons of mesopelagic planktonic community structures.	ISME Commun	2023
37730687	Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide.	Nat Commun	2023
37693522	Computational exploration of the global microbiome for antibiotic discovery.	bioRxiv	2023
36697862	Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies.	Nature	2023
37382405	Long-Read Sequencing Reveals Extensive DNA Methylations in Human Gut Phagenome Contributed by Prevalently Phage-Encoded Methyltransferases.	Adv Sci (Weinh)	2023
36849086	Sphingolipids Are Depleted in Alcohol-Related Liver Fibrosis.	Gastroenterology	2023
37485738	Consistency across multi-omics layers in a drug-perturbed gut microbial community.	Mol Syst Biol	2023
37596349	Ocean-wide comparisons of mesopelagic planktonic community structures.	ISME Commun	2023
37485738	Consistency across multi-omics layers in a drug-perturbed gut microbial community.	Mol Syst Biol	2023
37693522	Computational exploration of the global microbiome for antibiotic discovery.	bioRxiv	2023
37730687	Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide.	Nat Commun	2023
37382405	Long-Read Sequencing Reveals Extensive DNA Methylations in Human Gut Phagenome Contributed by Prevalently Phage-Encoded Methyltransferases.	Adv Sci (Weinh)	2023
36697862	Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies.	Nature	2023
36408900	proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes.	Nucleic Acids Res	2023
36849086	Sphingolipids Are Depleted in Alcohol-Related Liver Fibrosis.	Gastroenterology	2023
36399505	eggNOG 6.0: enabling comparative genomics across 12Â 535 organisms.	Nucleic Acids Res	2023
36370105	The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest.	Nucleic Acids Res	2023
34791031	metaSNV v2: detection of SNVs and subspecies in prokaryotic metagenomes.	Bioinformatics	2022
35398347	Metagenomic Identification of Microbial Signatures Predicting Pancreatic Cancer From a Multinational Study.	Gastroenterology	2022
36179685	Dissecting the intracellular pancreatic tumor microbiome at single-cell level.	Cancer Cell	2022
35389782	Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome.	Science	2022
36357800	Publisher Correction: Visualizing translation dynamics at atomic detail inside a bacterial cell.	Nature	2022
36171285	Visualizing translation dynamics at atomic detail inside a bacterial cell.	Nature	2022
35732736	Biosynthetic potential of the global ocean microbiome.	Nature	2022
35920817	Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems.	Elife	2022
36578059	Alterations of oral microbiota and impact on the gut microbiome in type 1 diabetes mellitus revealed by integratedÂ multi-omic analyses.	Microbiome	2022
36464731	Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments.	Microbiome	2022
35260444	A faecal microbiota signature with high specificity for pancreatic cancer.	Gut	2022
34912116	Towards the biogeography of prokaryotic genes.	Nature	2022
34791031	metaSNV v2: detection of SNVs and subspecies in prokaryotic metagenomes.	Bioinformatics	2022
35019670	Meconium Microbiome of Very Preterm Infants across Germany.	mSphere	2022
35017197	Impairment of gut microbial biotin metabolism and host biotin status in severe obesity: effect of biotin and prebiotic supplementation on improved metabolism.	Gut	2022
35118437	Enrichment of gut microbiome strains for cultivation-free genome sequencing using droplet microfluidics.	Cell Rep Methods	2022
35177860	Microbiome and metabolome features of the cardiometabolic disease spectrum.	Nat Med	2022
35323968	Landscape of mobile genetic elements and their antibiotic resistance cargo in prokaryotic genomes.	Nucleic Acids Res	2022
35732736	Biosynthetic potential of the global ocean microbiome.	Nature	2022
35398347	Metagenomic Identification of Microbial Signatures Predicting Pancreatic Cancer From a Multinational Study.	Gastroenterology	2022
35389782	Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome.	Science	2022
36578059	Alterations of oral microbiota and impact on the gut microbiome in type 1 diabetes mellitus revealed by integratedÂ multi-omic analyses.	Microbiome	2022
36464731	Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments.	Microbiome	2022
36179685	Dissecting the intracellular pancreatic tumor microbiome at single-cell level.	Cancer Cell	2022

1 - 50 of 1,254

Gareth A Palidwor

Ottawa Hospital Research Institute

Career Start Year 2005

Number of shared co-authors 2

Gang Fang

Icahn School of Medicine at Mount Sinai

Career Start Year 2005

Number of shared co-authors 22

Joshua Orvis

Institute for Genome Sciences, University of Maryland School of Medicine

Career Start Year 2004

Number of shared co-authors 46

Nadav Rappoport

Ben-Gurion University of the Negev

Career Start Year 2002

Number of shared co-authors 23

Madan Mohan Babu

St. Jude Children's Research Hospital

Career Start Year 2002

Number of shared co-authors 39

Ying Xu

The China-Japan Union Hospital, Jilin University

Career Start Year 2002

Number of shared co-authors 0

Christian M Zmasek

J. Craig Venter Institute

Career Start Year 2001

Number of shared co-authors 18

Paramvir S Dehal

Lawrence Berkeley National Laboratory

Career Start Year 2001

Number of shared co-authors 26

Weizhong Li

J. Craig Venter Institute

Career Start Year 2000

Number of shared co-authors 19

Rajkumar Sasidharan

University of California los angeles

Career Start Year 2000

Number of shared co-authors 33

Shuichi Kawashima

Database Center for Life Science, Joint Support-Center for Data Science Research

Career Start Year 1999

Number of shared co-authors 13

Kevin Bryson

University of Glasgow

Career Start Year 1999

Number of shared co-authors 25

Iddo Friedberg

Iowa State University

Career Start Year 1997

Number of shared co-authors 54

Florencio Pazos

National Centre for Biotechnology (CNB-CSIC)

Career Start Year 1997

Number of shared co-authors 6

Krzysztof Paw??owski

Kashubian Center for Heart and Vascular Diseases in Wejherowo, Pomeranian Hospitals

Career Start Year 1996

Number of shared co-authors 2

Stefano Toppo

University of Padova

Career Start Year 1996

Number of shared co-authors 37

Sarah A Teichmann

Wellcome Sanger Institute

Career Start Year 1996

Number of shared co-authors 66

Dirk Walther

Max Planck Institute of Molecular Plant Physiology

Career Start Year 1995

Number of shared co-authors 5

John Parkinson

The Hospital for Sick Children

Career Start Year 1994

Number of shared co-authors 25

Terry Gaasterland

Scripps Institution of Oceanography, University of California San Diego

Career Start Year 1994

Number of shared co-authors 80

Steven E Brenner

University of California berkeley

Career Start Year 1994

Number of shared co-authors 83

James R Brown

GlaxoSmithKline Pharma R&D, 1250 S. Collegeville Rd, Collegeville

Career Start Year 1994

Number of shared co-authors 5

Finn Drabl??s

NTNU - Norwegian University of Science and Technology

Career Start Year 1994

Number of shared co-authors 10

Jaap Heringa

VU University Amsterdam

Career Start Year 1991

Number of shared co-authors 17

Rintaro Saito

Institute for Advanced Biosciences, Keio University

Career Start Year 1988

Number of shared co-authors 22

Adam Godzik

University of California Riverside

Career Start Year 1987

Number of shared co-authors 45

Michal Linial

Institute of Life Sciences, The Hebrew University of Jerusalem

Career Start Year 1986

Number of shared co-authors 27

Lincoln Stein

Ontario Institute for Cancer Research, University Avenue

Career Start Year 1986

Number of shared co-authors 100

John M Hancock

the University of Texas Health Science Center at Houston

Career Start Year 1982

Number of shared co-authors 44

Shoba Ranganathan

Macquarie University

Career Start Year 1972

Number of shared co-authors 91

row(s) 1 - 30 of 30

Ivica Letunic

Co-authored papers 66

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Co-authored papers 66

Christian von Mering

Co-authored papers 57

Jeroen Raes

KU Leuven - University of Leuven

Co-authored papers 48

Georg Zeller

Max Planck Institute for Developmental Biology

Co-authored papers 36

Richard R Copley

Co-authored papers 31

Chris P Ponting

The University of Edinburgh

Co-authored papers 30

Manimozhiyan Arumugam

Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen

Co-authored papers 30

Anne-Claude Gavin

Co-authored papers 27

Kristoffer Forslund

Max Delbruck Center for Molecular Medicine (MDC)

Co-authored papers 26

Vera van Noort

Leiden University, Institute of Biology Leiden

Co-authored papers 24

Berend Snel

Utrecht University

Co-authored papers 23

Martijn A Huynen

Radboud University Medical Centre Nijmegen

Co-authored papers 23

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Co-authored papers 22

Takuji Yamada

Tokyo Institute of Technology

Co-authored papers 22

Chris Sander

Broad Institute of MIT and Harvard

Co-authored papers 22

Paul I Costea

Weizmann Institute of Science

Co-authored papers 21

S??ren Brunak

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Co-authored papers 18

Torben Hansen

Co-authored papers 18

Oluf Pedersen

Co-authored papers 18

Shamil R Sunyaev

Harvard Medical School

Co-authored papers 17

Martin Beck

Max Planck Institute of Biophysics

Co-authored papers 16

Murat Iskar

Friedrich Miescher Institute for Biomedical Research

Co-authored papers 16

Robert B Russell

Heidelberg University

Co-authored papers 16

Athanasios Typas

University of California san francisco

Co-authored papers 13

David Torrents

Institucio Catalana de Recerca i Estudis Avancats (ICREA)

Co-authored papers 13

Eoghan D Harrington

Co-authored papers 13

George M Weinstock

The Genome Center at Washington University, Washington University School of Medicine

Co-authored papers 12

Jean Muller

INSERM, Universite de Strasbourg

Co-authored papers 12

Robert D Finn

European Bioinformatics Institute

Co-authored papers 12

1 - 30

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