Author details

Full Name

David P Hill

Affiliation

ORCID

Career Start Year

2000

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36866529	The Gene Ontology knowledgebase in 2023.	Genetics	2023
37579192	Biochemical pathways represented by Gene Ontology-Causal Activity Models identify distinct phenotypes resulting from mutations in pathways.	Genetics	2023
36866529	The Gene Ontology knowledgebase in 2023.	Genetics	2023
36866529	The Gene Ontology knowledgebase in 2023.	Genetics	2023
37293039	Biochemical Pathways Represented by Gene Ontology Causal Activity Models Identify Distinct Phenotypes Resulting from Mutations in Pathways.	bioRxiv	2023
37162850	Semantic Representation of Neural Circuit Knowledge in <i>Caenorhabditis elegans</i>.	bioRxiv	2023
37579192	Biochemical pathways represented by Gene Ontology-Causal Activity Models identify distinct phenotypes resulting from mutations in pathways.	Genetics	2023
37293039	Biochemical Pathways Represented by Gene Ontology Causal Activity Models Identify Distinct Phenotypes Resulting from Mutations in Pathways.	bioRxiv	2023
37162850	Semantic Representation of Neural Circuit Knowledge in <i>Caenorhabditis elegans</i>.	bioRxiv	2023
36866529	The Gene Ontology knowledgebase in 2023.	Genetics	2023
33964129	Reactome and the Gene Ontology: digital convergence of data resources.	Bioinformatics	2021
33964129	Reactome and the Gene Ontology: digital convergence of data resources.	Bioinformatics	2021
34516839	The integrated stress response contributes to tRNA synthetase-associated peripheral neuropathy.	Science	2021
34516839	The integrated stress response contributes to tRNA synthetase-associated peripheral neuropathy.	Science	2021
32875947	Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns.	Open Biol	2020
33257774	Investigation of COVID-19 comorbidities reveals genes and pathways coincident with the SARS-CoV-2 viral disease.	Sci Rep	2020
32875947	Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns.	Open Biol	2020
32995795	Investigation of COVID-19 comorbidities reveals genes and pathways coincident with the SARS-CoV-2 viral disease.	bioRxiv	2020
33257774	Investigation of COVID-19 comorbidities reveals genes and pathways coincident with the SARS-CoV-2 viral disease.	Sci Rep	2020
32995795	Investigation of COVID-19 comorbidities reveals genes and pathways coincident with the SARS-CoV-2 viral disease.	bioRxiv	2020
30888410	Curating gene sets: challenges and opportunities for integrative analysis.	Database (Oxford)	2019
31684899	Cisplatin-resistant triple-negative breast cancer subtypes: multiple mechanisms of resistance.	BMC Cancer	2019
30888410	Curating gene sets: challenges and opportunities for integrative analysis.	Database (Oxford)	2019
31548717	Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems.	Nat Genet	2019
31684899	Cisplatin-resistant triple-negative breast cancer subtypes: multiple mechanisms of resistance.	BMC Cancer	2019
31548717	Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems.	Nat Genet	2019
29455577	Exploring autophagy with Gene Ontology.	Autophagy	2018
29440116	Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology.	Circ Genom Precis Med	2018
29455577	Exploring autophagy with Gene Ontology.	Autophagy	2018
29440116	Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology.	Circ Genom Precis Med	2018
27589964	Modeling biochemical pathways in the gene ontology.	Database (Oxford)	2016
27589964	Modeling biochemical pathways in the gene ontology.	Database (Oxford)	2016
26141960	Application of comparative biology in GO functional annotation: the mouse model.	Mamm Genome	2015
26141960	Application of comparative biology in GO functional annotation: the mouse model.	Mamm Genome	2015
24941002	Representing kidney development using the gene ontology.	PLoS One	2014
25495798	Methodology for the inference of gene function from phenotype data.	BMC Bioinformatics	2014
25937883	TermGenie - a web-application for pattern-based ontology class generation.	J Biomed Semantics	2014
24941002	Representing kidney development using the gene ontology.	PLoS One	2014
24885854	A method for increasing expressivity of Gene Ontology annotations using a compositional approach.	BMC Bioinformatics	2014
25937883	TermGenie - a web-application for pattern-based ontology class generation.	J Biomed Semantics	2014
25495798	Methodology for the inference of gene function from phenotype data.	BMC Bioinformatics	2014
24885854	A method for increasing expressivity of Gene Ontology annotations using a compositional approach.	BMC Bioinformatics	2014
23161678	Gene Ontology annotations and resources.	Nucleic Acids Res	2013
23981286	Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort.	Database (Oxford)	2013
23895341	Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology.	BMC Genomics	2013
24093723	The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments.	J Biomed Semantics	2013
23161678	Gene Ontology annotations and resources.	Nucleic Acids Res	2013
24093723	The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments.	J Biomed Semantics	2013
23895341	Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology.	BMC Genomics	2013
23981286	Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort.	Database (Oxford)	2013

1 - 50 of 102

Charles Tapley Hoyt

Harvard Medical School

Career Start Year 2014

Number of shared co-authors 13

Michael Ku Yu

University of California San Diego

Career Start Year 2014

Number of shared co-authors 2

Alfonso E Romero

University of Miami

Career Start Year 2012

Number of shared co-authors 16

Robert Hoehndorf

King Abdullah University of Science and Technology

Career Start Year 2006

Number of shared co-authors 20

Hai Fang

University of Bristol

Career Start Year 2006

Number of shared co-authors 63

Avi Ma'ayan

Icahn School of Medicine at Mount Sinai

Career Start Year 2005

Number of shared co-authors 2

Wenjin Jim Zheng

University of Texas Health Science Center at Houston

Career Start Year 2004

Number of shared co-authors 5

Anne Niknejad

University of Lausanne

Career Start Year 2004

Number of shared co-authors 27

Jake Y. Chen (CM4AI)

University of Alabama at Birmingham

Career Start Year 2003

Number of shared co-authors 0

Chunlei Wu

The Scripps Research Institute

Career Start Year 2002

Number of shared co-authors 7

Andrew I Su

The Scripps Research Institute

Career Start Year 2001

Number of shared co-authors 11

Kristina Hanspers

Gladstone Institutes

Career Start Year 2001

Number of shared co-authors 8

Gary D Bader

University of Toronto

Career Start Year 2000

Number of shared co-authors 23

Georgios V Gkoutos

Institute of Cancer and Genomic Sciences, University of Birmingham

Career Start Year 2000

Number of shared co-authors 33

Hedi Peterson

Institute of Computer Science, University of Tartu

Career Start Year 2000

Number of shared co-authors 4

Lars Juhl Jensen

Novo Nordisk Foundation Center for Protein Research, University of Copenhagen

Career Start Year 1998

Number of shared co-authors 14

Guanming Wu

Oregon Health and Science University

Career Start Year 1998

Number of shared co-authors 15

Ralf Herwig

Max Planck Institute for Molecular Genetics

Career Start Year 1998

Number of shared co-authors 4

Cecilia N Arighi

University of Delaware

Career Start Year 1998

Number of shared co-authors 69

Fabien Campagne

Weill Cornell Medical College

Career Start Year 1998

Number of shared co-authors 0

Helen Parkinson

European Bioinformatics Institute

Career Start Year 1997

Number of shared co-authors 52

Trey Ideker (CM4AI)

University of California San Diego

Career Start Year 1996

Number of shared co-authors 35

Melissa A Haendel

American Medical Informatics Association, Oregon Health and Science University, Oregon State University, University of Colorado Anschutz Medical Campus, University of North Carolina at Chapel Hill, University of Wisconsin-Madison

Career Start Year 1996

Number of shared co-authors 62

Georg Fuellen

Rostock University Medical Center

Career Start Year 1996

Number of shared co-authors 5

Damian Smedley

William Harvey Research Institute, Queen Mary University of London

Career Start Year 1996

Number of shared co-authors 34

Paul Pavlidis

University of British Columbia

Career Start Year 1994

Number of shared co-authors 18

Patricia L Whetzel

University of Colorado Anschutz Medical Campus

Career Start Year 1993

Number of shared co-authors 28

Lawrence E Hunter

University of Colorado School of Medicine

Career Start Year 1993

Number of shared co-authors 6

Christian J Stoeckert

Perelman School of Medicine, University of Pennsylvania

Career Start Year 1980

Number of shared co-authors 42

Yves A Lussier

Center for Biomedical Informatics and Biostatistics, University of Arizona

Career Start Year 1971

Number of shared co-authors 5

row(s) 1 - 30 of 30

Judith A Blake

Co-authored papers 29

Christopher J Mungall

International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences

Co-authored papers 14

Tanya Z Berardini

Carnegie Institution for Science

Co-authored papers 11

Kimberly Van Auken

California Institute of Technology

Co-authored papers 10

Midori A Harris

University of Cambridge

Co-authored papers 10

Martin Ringwald

Max-Planck-Institut fur Immunbiologie