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Author Details

Thomas O Metz
Pacific Northwest National Laboratory
2002
172
53
PMIDPaper TitleJournal TitlePublished Year
36677030Similarity Downselection: Finding the <i>n</i> Most Dissimilar Molecular Conformers for Reference-Free Metabolomics.Metabolites2023
37735622Systematic review of type 1 diabetes biomarkers reveals regulation in circulating proteins related to complement, lipid metabolism, and immune response.Clin Proteomics2023
37502972Decrease in multiple complement protein levels is associated with the development of islet autoimmunity and type 1 diabetes.medRxiv2023
37390828Plasma protein biomarkers predict the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity.Cell Rep Med2023
37307303A Dual-Gated Structures for Lossless Ion Manipulations-Ion Mobility Orbitrap Mass Spectrometry Platform for Combined Ultra-High-Resolution Molecular Analysis.Anal Chem2023
37235544Comparing Top-Down Proteoform Identification: Deconvolution, PrSM Overlap, and PTM Detection.J Proteome Res2023
36819069Interrogating the role of the milk microbiome in mastitis in the multi-omics era.Front Microbiol2023
36849975Rapid remodeling of the soil lipidome in response to a drying-rewetting event.Microbiome2023
36778509The unknown lipids project: harmonized methods improve compound identification and data reproducibility in an inter-laboratory untargeted lipidomics study.bioRxiv2023
35194611A global lipid map reveals host dependency factors conserved across SARS-CoV-2 variants.bioRxiv2022
35645584Simulated Night-Shift Schedule Disrupts the Plasma Lipidome and Reveals Early Markers of Cardiovascular Disease Risk.Nat Sci Sleep2022
35610037CFM-ID 4.0 - a web server for accurate MS-based metabolite identification.Nucleic Acids Res2022
35536252BioTransformer 3.0-a web server for accurately predicting metabolic transformation products.Nucleic Acids Res2022
35468213Integration of Infant Metabolite, Genetic, and Islet Autoimmunity Signatures to Predict Type 1 Diabetes by Age 6 Years.J Clin Endocrinol Metab2022
35430813DEIMoS: An Open-Source Tool for Processing High-Dimensional Mass Spectrometry Data.Anal Chem2022
35715395A global lipid map reveals host dependency factors conserved across SARS-CoV-2 variants.Nat Commun2022
36138446An initial investigation of accuracy required for the identification of small molecules in complex samples using quantum chemical calculated NMR chemical shifts.J Cheminform2022
36273173Xanthohumol microbiome and signature in adults with Crohn's disease (the XMaS trial): a protocol for a phase II triple-masked, placebo-controlled clinical trial.Trials2022
36014071Soil Metabolomics Predict Microbial Taxa as Biomarkers of Moisture Status in Soils from a Tidal Wetland.Microorganisms2022
35138971GDF15: a potential therapeutic target for type 1 diabetes.Expert Opin Ther Targets2022
32969549Supernatants of intestinal luminal contents from mice fed high-fat diet impair intestinal motility by injuring enteric neurons and smooth muscle cells.Neurogastroenterol Motil2021
33883556A resource of lipidomics and metabolomics data from individuals with undiagnosed diseases.Sci Data2021
33629812Xanthohumol Microbiome and Signature in Healthy Adults (the XMaS Trial): Safety and Tolerability Results of a Phase I Triple-Masked, Placebo-Controlled Clinical Trial.Mol Nutr Food Res2021
33515546Ceramide synthase 2 deletion decreases the infectivity of HIV-1.J Biol Chem2021
33871993Correction to "<i>Chespa</i>: Streamlining Expansive Chemical Space Evaluation of Molecular Sets".J Chem Inf Model2021
33732731Corrigendum: Light-Stress Influences the Composition of the Murine Gut Microbiome, Memory Function, and Plasma Metabolome.Front Mol Biosci2021
33606495Exploring the Impacts of Conformer Selection Methods on Ion Mobility Collision Cross Section Predictions.Anal Chem2021
34496231Deoxyhypusine synthase promotes a pro-inflammatory macrophage phenotype.Cell Metab2021
34609163Erratum for Quinn et al., "Bridging the Gap between Analytical and Microbial Sciences in Microbiome Research".mSystems2021
34519522Bridging the Gap between Analytical and Microbial Sciences in Microbiome Research.mSystems2021
34842435Mass Spectrometry Adduct Calculator.J Chem Inf Model2021
34244696Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation.Nat Protoc2021
34061574MetFish: a Metabolomics Pipeline for Studying Microbial Communities in Chemically Extreme Environments.mSystems2021
34145874AutoCCS: automated collision cross-section calculation software for ion mobility spectrometry-mass spectrometry.Bioinformatics2021
33979149Quantum Chemistry Calculations for Metabolomics.Chem Rev2021
34372702Unfolded Protein Response Inhibition Reduces Middle East Respiratory Syndrome Coronavirus-Induced Acute Lung Injury.mBio2021
33169034Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data.Nat Biotechnol2021
33124145Prediction of the development of islet autoantibodies through integration of environmental, genetic, and metabolic markers.J Diabetes2021
32190784Effects of ingested nanocellulose on intestinal microbiota and homeostasis in Wistar Han rats.NanoImpact2020
31928885Comprehensive Proteomics Analysis of Stressed Human Islets Identifies GDF15 as a Target for Type 1 Diabetes Intervention.Cell Metab2020
31742994Statistically Driven Metabolite and Lipid Profiling of Patients from the Undiagnosed Diseases Network.Anal Chem2020
31883096Metabolite, Protein, and Lipid Extraction (MPLEx): A Method that Simultaneously Inactivates Middle East Respiratory Syndrome Coronavirus and Allows Analysis of Multiple Host Cell Components Following Infection.Methods Mol Biol2020
33283505<i>Chespa</i>: Streamlining Expansive Chemical Space Evaluation of Molecular Sets.J Chem Inf Model2020
33028396Xanthohumol microbiome and signature in healthy adults (the XMaS trial): a phase I triple-masked, placebo-controlled clinical trial.Trials2020
33106168Correction to: Xanthohumol microbiome and signature in healthy adults (the XMaS trial): a phase I triple-masked, placebo-controlled clinical trial.Trials2020
33104717Correction: yippee like 3 (ypel3) is a novel gene required for myelinating and perineurial glia development.PLoS Genet2020
33048839Probing islet stress in type 1 diabetes.Aging (Albany NY)2020
32850487Who Is Metabolizing What? Discovering Novel Biomolecules in the Microbiome and the Organisms Who Make Them.Front Cell Infect Microbiol2020
32616808Integrated network modeling approach defines key metabolic responses of soil microbiomes to perturbations.Sci Rep2020
32694525A global lipid map defines a network essential for Zika virus replication.Nat Commun2020
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Collaborators

Pacific Northwest National Laboratory
Co-authored papers 68
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Co-authored papers 42
Hanyang University
Co-authored papers 42
Pacific Northwest National Laboratory
Co-authored papers 30
Co-authored papers 28
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Co-authored papers 27
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Center for Translational Biomedical Research
Co-authored papers 18
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Co-authored papers 17
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Pacific Northwest National Laboratory
Co-authored papers 16
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Co-authored papers 15
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Co-authored papers 15
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Co-authored papers 15
Co-authored papers 15
Co-authored papers 15
Pacific Northwest National Laboratory
Co-authored papers 14
Pacific Northwest National Laboratory
Co-authored papers 14
Pacific Northwest National Laboratory
Co-authored papers 13
University of North Carolina
Co-authored papers 12
Co-authored papers 11
Pacific Northwest National Laboratory
Co-authored papers 11
The University of North Carolina at Chapel Hill
Co-authored papers 11
Pacific Northwest National Laboratory
Co-authored papers 11
University of Washington
Co-authored papers 10
Pacific Northwest National Laboratory
Co-authored papers 10
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Pacific Northwest National Laboratory
Co-authored papers 10
Pacific Northwest National Laboratory
Co-authored papers 9
Pacific Northwest National Laboratory
Co-authored papers 9