Author details

Full Name

David Van Den Berg

Affiliation

ORCID

Career Start Year

1986

Papers

206

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37425716	Interaction molecular QTL mapping discovers cellular and environmental modifiers of genetic regulatory effects.	bioRxiv	2023
37601969	Multiset correlation and factor analysis enables exploration of multi-omics data.	Cell Genom	2023
37666943	Correction: Distinct germline genetic susceptibility profiles identified for common non-Hodgkin lymphoma subtypes.	Leukemia	2023
37868038	The functional impact of rare variation across the regulatory cascade.	Cell Genom	2023
37216410	Canonical correlation analysis for multi-omics: Application to cross-cohort analysis.	PLoS Genet	2023
37106434	Construction of high coverage whole-genome sequencing libraries from single colon crypts without DNA extraction or whole-genome amplification.		2023
35536696	Pulmonary Function and Blood DNA Methylation: A Multiancestry Epigenome-Wide Association Meta-analysis.	Am J Respir Crit Care Med	2022
35658476	Arsenic Exposure, Blood DNA Methylation, and Cardiovascular Disease.	Circ Res	2022
34415308	Epigenome-wide association study of mitochondrial genome copy number.	Hum Mol Genet	2021
34294836	Prognostic impact of pre-transplant chromosomal aberrations in peripheral blood of patients undergoing unrelated donor hematopoietic cell transplant for acute myeloid leukemia.	Sci Rep	2021
34220922	Genome-Wide Association Analyses Identify Variants in <i>IRF4</i> Associated With Acute Myeloid Leukemia and Myelodysplastic Syndrome Susceptibility.	Front Genet	2021
34050697	Clonal hematopoiesis associated with epigenetic aging and clinical outcomes.	Aging Cell	2021
33570634	Pre-HCT mosaicism increases relapse risk and lowers survival in acute lymphoblastic leukemia patients post-unrelated HCT.	Blood Adv	2021
33931109	Epigenome-wide association study of kidney function identifies trans-ethnic and ethnic-specific loci.	Genome Med	2021
33713608	Discovery and fine-mapping of height loci via high-density imputation of GWASs in individuals of African ancestry.	Am J Hum Genet	2021
32851660	Mendelian randomization analyses suggest a role for cholesterol in the development of endometrial cancer.	Int J Cancer	2021
34746714	Novel genetic variants associated with mortality after unrelated donor allogeneic hematopoietic cell transplantation.	EClinicalMedicine	2021
34937574	Associations between DNA methylation and BMI vary by metabolic health status: a potential link to disparate cardiovascular outcomes.	Clin Epigenetics	2021
33057025	Whole genome sequence analysis of pulmonary function and COPD in 19,996 multi-ethnic participants.	Nat Commun	2020
31935283	A meta-analysis of genome-wide association studies of multiple myeloma among men and women of African ancestry.	Blood Adv	2020
32469686	Variability in Cytogenetic Testing for Multiple Myeloma: A Comprehensive Analysis From Across the United States.	JCO Oncol Pract	2020
31391166	Validation of genetic associations with acute GVHD and nonrelapse mortality in DISCOVeRY-BMT.	Blood Adv	2019
30510241	Discovery of common and rare genetic risk variants for colorectal cancer.	Nat Genet	2019
29917119	Novel Common Genetic Susceptibility Loci for Colorectal Cancer.	J Natl Cancer Inst	2019
31455667	Multiple functional variants in the <i>IL1RL1</i> region are pretransplant markers for risk of GVHD and infection deaths.	Blood Adv	2019
30956231	Data-adaptive multi-locus association testing in subjects with arbitrary genealogical relationships.	Stat Appl Genet Mol Biol	2019
30668190	DNA methylation patterns of adult survivors of adolescent/young adult Hodgkin lymphoma compared to their unaffected monozygotic twin.	Leuk Lymphoma	2019
29633761	Publisher Correction: Evidence that breast cancer risk at the 2q35 locus is mediated through IGFBP5 regulation.	Nat Commun	2018
30400783	Growth factor genes and change in mammographic density after stopping combined hormone therapy in the California Teachers Study.	BMC Cancer	2018
29915430	A transcriptome-wide association study of 229,000 women identifies new candidate susceptibility genes for breast cancer.	Nat Genet	2018
30093612	Identification of nine new susceptibility loci for endometrial cancer.	Nat Commun	2018
29247577	Ovarian cancer risk, ALDH2 polymorphism and alcohol drinking: Asian data from the Ovarian Cancer Association Consortium.	Cancer Sci	2018
28295283	Novel colon cancer susceptibility variants identified from a genome-wide association study in African Americans.	Int J Cancer	2017
28864454	Genome-Wide Testing of Exonic Variants and Breast Cancer Risk in the California Teachers Study.	Cancer Epidemiol Biomarkers Prev	2017
28346442	Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer.	Nat Genet	2017
29059683	Association analysis identifies 65 new breast cancer risk loci.	Nature	2017
29058716	Identification of ten variants associated with risk of estrogen-receptor-negative breast cancer.	Nat Genet	2017
29117387	Two Novel Susceptibility Loci for Prostate Cancer in Men of African Ancestry.	J Natl Cancer Inst	2017
29577081	Pharmacogenetic Associations with ADME Variants and Virologic Response to an Initial HAART Regimen in HIV-Infected Women.	Int J HIV AIDS Res	2017
27697780	The OncoArray Consortium: A Network for Understanding the Genetic Architecture of Common Cancers.	Cancer Epidemiol Biomarkers Prev	2017
27587788	A Meta-analysis of Multiple Myeloma Risk Regions in African and European Ancestry Populations Identifies Putatively Functional Loci.	Cancer Epidemiol Biomarkers Prev	2016
25940428	No clinical utility of KRAS variant rs61764370 for ovarian or breast cancer.	Gynecol Oncol	2016
26848776	A targeted genetic association study of epithelial ovarian cancer susceptibility.	Oncotarget	2016
26976855	Assessment of Multifactor Gene-Environment Interactions and Ovarian Cancer Risk: Candidate Genes, Obesity, and Hormone-Related Risk Factors.	Cancer Epidemiol Biomarkers Prev	2016
26747452	Investigation of Exomic Variants Associated with Overall Survival in Ovarian Cancer.	Cancer Epidemiol Biomarkers Prev	2016
27291797	Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome.	Nat Commun	2016
27008869	GWAS meta-analysis of 16 852 women identifies new susceptibility locus for endometrial cancer.	Hum Mol Genet	2016
26921362	No evidence that protein truncating variants in BRIP1 are associated with breast cancer risk: implications for gene panel testing.	J Med Genet	2016
26732427	Identification of a novel susceptibility locus at 13q34 and refinement of the 20p12.2 region as a multi-signal locus associated with bladder cancer risk in individuals of European ancestry.	Hum Mol Genet	2016
27402876	An intergenic risk locus containing an enhancer deletion in 2q35 modulates breast cancer risk by deregulating IGFBP5 expression.	Hum Mol Genet	2016