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Author Details

Julian Gough
Medical Research Council Laboratory of Molecular Biology
2001
101
56
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36350672InterPro in 2022.Nucleic Acids Res2023
36350672InterPro in 2022.Nucleic Acids Res2023
36808136Hypothesis-free phenotype prediction within a genetics-first framework.Nat Commun2023
37061086The dcGO Domain-Centric Ontology Database in 2023: New Website and Extended Annotations for Protein Structural Domains.J Mol Biol2023
37061086The dcGO Domain-Centric Ontology Database in 2023: New Website and Extended Annotations for Protein Structural Domains.J Mol Biol2023
36808136Hypothesis-free phenotype prediction within a genetics-first framework.Nat Commun2023
33156333The InterPro protein families and domains database: 20 years on.Nucleic Acids Res2021
34285776A survey of direct-to-consumer genotype data, and quality control tool (<i>GenomePrep</i>) for research.Comput Struct Biotechnol J2021
33156333The InterPro protein families and domains database: 20 years on.Nucleic Acids Res2021
34285776A survey of direct-to-consumer genotype data, and quality control tool (<i>GenomePrep</i>) for research.Comput Struct Biotechnol J2021
32621218The Genome3D Consortium for Structural Annotations of Selected Model Organisms.Methods Mol Biol2020
31733063Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation.Nucleic Acids Res2020
31724711The SCOP database in 2020: expanded classification of representative family and superfamily domains of known protein structures.Nucleic Acids Res2020
32621218The Genome3D Consortium for Structural Annotations of Selected Model Organisms.Methods Mol Biol2020
31733063Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation.Nucleic Acids Res2020
31724711The SCOP database in 2020: expanded classification of representative family and superfamily domains of known protein structures.Nucleic Acids Res2020
30445555The SUPERFAMILY 2.0 database: a significant proteome update and a new webserver.Nucleic Acids Res2019
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
30398656InterPro in 2019: improving coverage, classification and access to protein sequence annotations.Nucleic Acids Res2019
30445555The SUPERFAMILY 2.0 database: a significant proteome update and a new webserver.Nucleic Acids Res2019
31290135Correction to: Molecular Interaction Networks to Select Factors for Cell Conversion.Methods Mol Biol2019
31062318Molecular Interaction Networks to Select Factors for Cell Conversion.Methods Mol Biol2019
31353185Short- and Long-Term Effects of UVA on Arabidopsis Are Mediated by a Novel cGMP Phosphodiesterase.Curr Biol2019
30997511'Why genes in pieces?'-revisited.Nucleic Acids Res2019
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
31353185Short- and Long-Term Effects of UVA on Arabidopsis Are Mediated by a Novel cGMP Phosphodiesterase.Curr Biol2019
31290135Correction to: Molecular Interaction Networks to Select Factors for Cell Conversion.Methods Mol Biol2019
31062318Molecular Interaction Networks to Select Factors for Cell Conversion.Methods Mol Biol2019
30997511'Why genes in pieces?'-revisited.Nucleic Acids Res2019
30398656InterPro in 2019: improving coverage, classification and access to protein sequence annotations.Nucleic Acids Res2019
27899635InterPro in 2017-beyond protein family and domain annotations.Nucleic Acids Res2017
28544481Matching phenotypes to whole genomes: Lessons learned from four iterations of the personal genome project community challenges.Hum Mutat2017
28440912Performance of in silico tools for the evaluation of p16INK4a (CDKN2A) variants in CAGI.Hum Mutat2017
27899635InterPro in 2017-beyond protein family and domain annotations.Nucleic Acids Res2017
28241135An atlas of human long non-coding RNAs with accurate 5' ends.Nature2017
27794045Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals.Nucleic Acids Res2017
27909045A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.Plant Physiol2017
28440912Performance of in silico tools for the evaluation of p16INK4a (CDKN2A) variants in CAGI.Hum Mutat2017
28241135An atlas of human long non-coding RNAs with accurate 5' ends.Nature2017
28544481Matching phenotypes to whole genomes: Lessons learned from four iterations of the personal genome project community challenges.Hum Mutat2017
27909045A Subset of Ubiquitin-Conjugating Enzymes Is Essential for Plant Immunity.Plant Physiol2017
27794045Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals.Nucleic Acids Res2017
26926518Hologenome analysis of two marine sponges with different microbiomes.BMC Genomics2016
26926518Hologenome analysis of two marine sponges with different microbiomes.BMC Genomics2016
26780608A predictive computational framework for direct reprogramming between human cell types.Nat Genet2016
27358427Evolution of the Calcium-Based Intracellular Signaling System.Genome Biol Evol2016
26941008Three reasons protein disorder analysis makes more sense in the light of collagen.Protein Sci2016
27604469An expanded evaluation of protein function prediction methods shows an improvement in accuracy.Genome Biol2016
27736295Computational methods for direct cell conversion.Cell Cycle2016
27497315Did Viruses Evolve As a Distinct Supergroup from Common Ancestors of Cells?Genome Biol Evol2016
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Piero Carninci
RIKEN Center for Integrative Medical Sciences
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Teresa K Attwood
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Darren A Natale
Georgetown University Medical Center
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Timothy Ravasi
Okinawa Institute of Science and Technology Graduate University
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Daniel H Haft
National Center for Biotechnology Information, National Institutes of Health
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Harukazu Suzuki
RIKEN Center for Integrative Medical Sciences
Co-authored papers 7
David A Hume
Mater Research Institute-UQ, Translational Research Institute
Co-authored papers 7
Arun Prasad Pandurangan
Co-authored papers 7
Takeya Kasukawa
RIKEN Center for Integrative Medical Sciences
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Release 1.2