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Author Details

Philip Ewels
Stockholm University
2008
22
14
PMIDPaper TitleJournal TitlePublished Year
35324885Ten simple rules for making a software tool workflow-ready.PLoS Comput Biol2022
35675515Linked-read whole-genome sequencing resolves common and private structural variants in multiple myeloma.Blood Adv2022
34995389Local selection signals in the genome of blue tits emphasize regulatory and neuronal evolution.Mol Ecol2022
33980276Ultralow amounts of DNA from long-term archived serum samples produce high-quality methylomes.Clin Epigenetics2021
34153189DIAproteomics: A Multifunctional Data Analysis Pipeline for Data-Independent Acquisition Proteomics and Peptidomics.J Proteome Res2021
32419391Linked-read sequencing enables haplotype-resolved resequencing at population scale.Mol Ecol Resour2020
32055031The nf-core framework for community-curated bioinformatics pipelines.Nat Biotechnol2020
32591764Publisher Correction: Building an international consortium for tracking coronavirus health status.Nat Med2020
31349102Genome-wide evidence supports mitochondrial relationships and pervasive parallel phenotypic evolution in open-habitat chats.Mol Phylogenet Evol2019
27838757Transcriptomics and methylomics of CD4-positive T cells in arsenic-exposed women.Arch Toxicol2017
26899024A Complete Overhaul of the Electron Energy-Loss Spectroscopy and X-Ray Absorption Spectroscopy Database: eelsdb.eu.Microsc Microanal2016
27131363Single base resolution analysis of 5-hydroxymethylcytosine in 188 human genes: implications for hepatic gene expression.Nucleic Acids Res2016
27312411MultiQC: summarize analysis results for multiple tools and samples in a single report.Bioinformatics2016
25640177Global reorganization of the nuclear landscape in senescent cells.Cell Rep2015
26483466Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies.Proc Natl Acad Sci U S A2015
26835000HiCUP: pipeline for mapping and processing Hi-C data.F1000Res2015
25938943Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C.Nat Genet2015
25135198Understanding functional miRNA-target interactions in vivo by site-specific genome engineering.Nat Commun2014
21258046Meet the neighbours: tools to dissect nuclear structure and function.Brief Funct Genomics2011
18438406Genetic determinants of ulcerative colitis include the ECM1 locus and five loci implicated in Crohn's disease.Nat Genet2008
18322069High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia.J Clin Microbiol2008
18505799Sorting nexin-1 defines an early phase of Salmonella-containing vacuole-remodeling during Salmonella infection.J Cell Sci2008
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Collaborators

Max K??ller
KTH Royal Institute of Technology
Co-authored papers 3
Panos Deloukas
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 2
Wolf Reik
The Babraham Institute
Co-authored papers 2
Xihong Lin
Harvard T.H. Chan School of Public Health
Co-authored papers 1
Gunnar R??tsch
ETH Zurich
Co-authored papers 1
Michael Inouye
Co-authored papers 1
Eran Segal
Weizmann Institute of Science
Co-authored papers 1
Nicholas A Watkins
Co-authored papers 1
Marina Marcet-Houben
Institute for Research in Biomedicine (IRB)
Co-authored papers 1
Feng Zhang
Massachusetts Institute of Technology, USA Broad Institute
Co-authored papers 1
Silvano Coletti
Co-authored papers 1
Ayya Keshet
Weizmann Institute of Science
Co-authored papers 1
Carole Goble
University of Manchester
Co-authored papers 1
William E Allen
Harvard University
Co-authored papers 1
Ran D Balicer
Clalit Health Services, Ben Gurion University
Co-authored papers 1
Ximena Bonilla
ETH Zurich, University Hospital Zurich
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Gregory Landua
Co-authored papers 1
Chris P Ponting
The University of Edinburgh
Co-authored papers 1
David A Drew
Massachusetts General Hospital and Harvard Medical School
Co-authored papers 1
Tim D Spector
King's College London
Co-authored papers 1
Faisal Alquaddoomi
ETH Zurich
Co-authored papers 1
Natalie R Davidson
University of Colorado Anschutz School of Medicine
Co-authored papers 1
Hagai Rossman
Weizmann Institute of Science
Co-authored papers 1
Alan R Williams
The University of Manchester
Co-authored papers 1
Paul Wilmes
University of Luxembourg
Co-authored papers 1
Oliver Kohlbacher
Max Planck Institute for Developmental Biology
Co-authored papers 1
Lon R Cardon
BioMarin Pharmaceutical Inc.
Co-authored papers 1
Iman Hajirasouliha
Institute for Computational Biomedicine
Co-authored papers 1
Irene Stevens
Karolinska Institutet
Co-authored papers 1
Svetlana Ovchinnikova
Center for Molecular Biology (ZMBH), University of Heidelberg
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