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Author Details

Thomas Kelder
Maastricht University
2007
31
17
PMIDPaper TitleJournal TitlePublished Year
28167232Integrative network analysis reveals time-dependent molecular events underlying left ventricular remodeling in post-myocardial infarction patients.Biochim Biophys Acta Mol Basis Dis2017
27587664The Network Library: a framework to rapidly integrate network biology resources.Bioinformatics2016
25466819White adipose tissue reference network: a knowledge resource for exploring health-relevant relations.Genes Nutr2015
26272981cyNeo4j: connecting Neo4j and Cytoscape.Bioinformatics2015
26122086A user-friendly workflow for analysis of Illumina gene expression bead array data available at the arrayanalysis.org portal.BMC Genomics2015
26148350Drugs that reverse disease transcriptomic signatures are more effective in a mouse model of dyslipidemia.Mol Syst Biol2015
26017391Network-based integration of molecular and physiological data elucidates regulatory mechanisms underlying adaptation to high-fat diet.Genes Nutr2015
25706687PathVisio 3: an extendable pathway analysis toolbox.PLoS Comput Biol2015
24938300A systems biology approach to understand the pathophysiological mechanisms of cardiac pathological hypertrophy associated with rosiglitazone.BMC Med Genomics2014
25204982Network signatures link hepatic effects of anti-diabetic interventions with systemic disease parameters.BMC Syst Biol2014
24979151Correlation network analysis reveals relationships between diet-induced changes in human gut microbiota and metabolic health.Nutr Diabetes2014
23457508Differential effects of drug interventions and dietary lifestyle in developing type 2 diabetes and complications: a systems biology analysis in LDLr-/- mice.PLoS One2013
24340000CyTargetLinker: a cytoscape app to integrate regulatory interactions in network analysis.PLoS One2013
24086498Coordinated and interactive expression of genes of lipid metabolism and inflammation in adipose tissue and liver during metabolic overload.PLoS One2013
23434610Colestilan decreases weight gain by enhanced NEFA incorporation in biliary lipids and fecal lipid excretion.J Lipid Res2013
22096230WikiPathways: building research communities on biological pathways.Nucleic Acids Res2012
23086299Systems biology analysis unravels the complementary action of combined rosuvastatin and ezetimibe therapy.Pharmacogenet Genomics2012
22648731Effect of supplementation with an 80:20 cis9,trans11 conjugated linoleic acid blend on the human platelet proteome.Mol Nutr Food Res2012
22648667Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin E-deficient rats--a proteomics and network analysis approach.Mol Nutr Food Res2012
21843341Exploring pathway interactions in insulin resistant mouse liver.BMC Syst Biol2011
20047655The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services.BMC Bioinformatics2010
20824171Finding the right questions: exploratory pathway analysis to enhance biological discovery in large datasets.PLoS Biol2010
20634946A combined transcriptomics and lipidomics analysis of subcutaneous, epididymal and mesenteric adipose tissue reveals marked functional differences.PLoS One2010
20098690Time-resolved and tissue-specific systems analysis of the pathogenesis of insulin resistance.PLoS One2010
19649250Mining biological pathways using WikiPathways web services.PLoS One2009
18651794WikiPathways: pathway editing for the people.PLoS Biol2008
18817533Presenting and exploring biological pathways with PathVisio.BMC Bioinformatics2008
19034556The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation.Genes Nutr2008
19034548The role of bioinformatics in pathway curation.Genes Nutr2008
18535227The emerging world of wikis.Science2008
17599938Eu.Gene Analyzer a tool for integrating gene expression data with pathway databases.Bioinformatics2007
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Collaborators

Chris T Evelo
Maastricht University
Co-authored papers 15
Marijana Radonjic
Top Institute Food and Nutrition
Co-authored papers 12
Alexander R Pico
Institute of Data Science and Biotechnology, Gladstone Institutes
Co-authored papers 8
Bruce R Conklin
Gladstone Institutes
Co-authored papers 6
Kristina Hanspers
Gladstone Institutes
Co-authored papers 5
Georg Summer
Cardiovascular Research Institute Maastricht (CARIM), Maastricht University
Co-authored papers 3
Stephane Heymans
Maastricht University Medical Centre
Co-authored papers 2
Barry L Wanner
Harvard Medical School
Co-authored papers 1
Helen M Roche
UCD Conway Institute, School of Public Health, University College Dublin
Co-authored papers 1
Philippe Amouyel
Co-authored papers 1
Deborah A Siegele
Texas A&M University, College Station
Co-authored papers 1
Jianjiong Gao
Memorial Sloan Kettering Cancer Center
Co-authored papers 1
Karolina Maciag
Broad Institute of MIT and Harvard
Co-authored papers 1
Daisuke Kihara
Purdue University
Co-authored papers 1
Michiel E Adriaens
Maastricht University
Co-authored papers 1
James C Hu
Texas A&M University and Texas Agrilife Research, College Station
Co-authored papers 1
Barry Demchak
University of California
Co-authored papers 1
Eytan Ruppin
National Cancer Institute
Co-authored papers 1
Christine G Elsik
University of Missouri
Co-authored papers 1
Keiichiro Ono
university of california san diego
Co-authored papers 1
Andra Waagmeester
Maastricht University
Co-authored papers 1
Release 1.2